Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06128 Selenicereus undatus HOM05D014633 ORTHO05D012524 3.2e-92 341.7 161 100.0
Hund12819 Selenicereus undatus HOM05D014633 ORTHO05D012524 7.6e-54 214.2 106 95.3
Hund05069 Selenicereus undatus HOM05D014633 ORTHO05D012524 3.5e-51 205.3 111 88.3
Hund10857 Selenicereus undatus HOM05D000225 ORTHO05D001595 1.3e-45 186.8 100 85.0
Hund13430 Selenicereus undatus HOM05D002042 ORTHO05D008431 7.9e-27 124.4 82 70.7
Hund22191 Selenicereus undatus HOM05D011119 ORTHO05D011737 1.3e-26 123.6 104 58.7
Hund24974 Selenicereus undatus HOM05D005236 ORTHO05D006557 2.6e-22 109.4 95 60.0
SHI03109 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-19 98.6 95 48.4
SHI08945 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-19 98.6 131 42.0
SHI00352 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-18 97.4 95 48.4
SHI15021 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-18 97.4 95 48.4
SHI50872 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-18 97.4 95 48.4
SHI54655 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-18 97.4 95 48.4
SHI55032 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-18 97.4 95 48.4
SHI50854 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-18 95.5 95 46.3
Hund15380 Selenicereus undatus HOM05D014633 ORTHO05D012524 3.9e-18 95.5 50 86.0
SHI54723 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-18 95.1 95 47.4
SHI07308 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-17 94.0 95 47.4
SHI51648 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-17 92.4 89 48.3
SHI51847 Sapria himalayana HOM05D000004 ORTHO05D000002 3.3e-17 92.4 89 48.3
SHI33973 Sapria himalayana HOM05D000004 ORTHO05D000002 5.7e-17 91.7 80 52.5
SHI51873 Sapria himalayana HOM05D000004 ORTHO05D000002 7.4e-17 91.3 89 48.3
Hma1.2p1_1811F.1_g303620 Hydrangea macrophylla HOM05D000013 ORTHO05D013298 1.2e-14 84.0 115 41.7
Atru.chr7.393 Acer truncatum HOM05D000004 ORTHO05D000002 1.5e-14 83.6 82 48.8
Hund23989 Selenicereus undatus HOM05D014633 ORTHO05D012524 2.0e-14 83.2 56 73.2
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.9e-13 79.3 72 43.1
TWI34G1848 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.5e-13 77.8 72 43.1
Hma1.2p1_0500F.1_g166980 Hydrangea macrophylla HOM05D014633 ORTHO05D000002 1.4e-12 77.0 115 35.7
SHI47463 Sapria himalayana HOM05D000004 ORTHO05D000002 2.5e-12 76.3 58 55.2
Hma1.2p1_0908F.1_g235660 Hydrangea macrophylla HOM05D014633 ORTHO05D013298 7.2e-12 74.7 84 48.8
QL01p015808 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-11 73.6 90 40.0
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-11 73.6 90 40.0
QL11p032775 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-11 73.6 90 40.0
QL03p069728 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-11 73.2 90 40.0
QL09p002786 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-11 73.2 90 40.0
CSS0000480 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-11 72.8 71 45.1
CSS0024529 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-11 72.8 71 45.1
QL04p013037 Quercus lobata HOM05D000004 ORTHO05D000002 3.6e-11 72.4 90 40.0
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 4.7e-11 72.0 86 41.9
QL05p008770 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-10 70.9 90 40.0
Rhsim01G0213500 Rhododendron simsii HOM05D000415 ORTHO05D002707 1.4e-10 70.5 92 43.5
SHI50759 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-10 68.6 51 54.9
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-10 68.2 83 37.3
QL04p062382 Quercus lobata HOM05D000004 ORTHO05D000002 8.8e-10 67.8 69 46.4
RcHm_v2.0_Chr7g0243211 Rosa chinensis HOM05D000004 ORTHO05D000002 8.8e-10 67.8 117 31.6
QL05p061522 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-09 65.5 61 47.5
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 7.4e-09 64.7 103 33.0
Thecc.01G168500 Theobroma cacao HOM05D000004 ORTHO05D000002 7.4e-09 64.7 63 49.2
Thecc.01G232700 Theobroma cacao HOM05D000004 ORTHO05D000002 7.4e-09 64.7 63 49.2
Hma1.2p1_1135F.1_g260450 Hydrangea macrophylla HOM05D011671 ORTHO05D013298 9.7e-09 64.3 51 49.0
QL02p062220 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-09 64.3 64 42.2
QL02p103579 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-09 64.3 64 42.2
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-09 64.3 64 42.2
QL12p028861 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-09 64.3 64 42.2
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 9.7e-09 64.3 64 42.2
Hund10617 Selenicereus undatus HOM05D000087 ORTHO05D014740 9.7e-09 64.3 57 45.6
CSS0017092 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 1.3e-08 63.9 64 46.9
TWI77G0040 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 1.3e-08 63.9 79 36.7
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 6.3e-08 61.6 63 47.6
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 60.5 75 40.0
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 2.4e-07 59.7 83 42.2
FAN06G4849 Fragaria x ananassa HOM05D004065 ORTHO05D004806 5.3e-07 58.5 108 38.0
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.3e-07 58.5 68 35.3
TWI38G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-06 57.4 68 35.3
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.6e-06 57.0 61 34.4
Thecc.02G260600 Theobroma cacao HOM05D000004 ORTHO05D000002 4.5e-06 55.5 63 44.4
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.7e-06 54.7 58 43.1
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.7e-06 54.7 58 43.1


User provided reference genes

Program Settings