Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 3.2e-223 778.1 385 100.0
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 8.5e-136 487.6 345 71.6
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.3e-131 473.8 346 69.4
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.5e-127 460.3 287 75.6
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 6.1e-126 454.9 309 72.2
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.4e-125 453.8 323 70.9
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 8.3e-123 444.5 321 68.5
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.1e-122 444.1 312 69.2
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 3.1e-122 442.6 306 71.2
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 4.1e-122 442.2 304 70.7
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.7e-121 439.5 347 65.1
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.0e-120 437.6 314 67.5
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.3e-120 437.2 330 66.4
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.3e-120 436.4 310 70.0
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 2.3e-120 436.4 306 70.3
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.8e-120 435.6 291 72.2
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.0e-120 435.3 290 73.4
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 6.5e-120 434.9 309 67.6
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 6.5e-120 434.9 309 69.6
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 6.5e-120 434.9 293 72.0
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 8.6e-120 434.5 344 64.5
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.5e-119 433.0 309 68.0
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 3.2e-119 432.6 347 64.0
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.6e-118 430.3 347 63.7
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.1e-118 429.9 347 63.7
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.8e-118 429.5 343 63.3
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.8e-118 429.5 289 72.0
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.0e-117 427.6 291 70.4
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.0e-117 427.6 301 68.8
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.8e-117 426.8 347 63.4
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.3e-117 426.4 294 69.7
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 6.8e-117 424.9 301 68.1
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 6.8e-117 424.9 285 71.6
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 8.8e-117 424.5 352 63.4
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.5e-116 423.7 347 62.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 2.0e-116 423.3 319 66.8
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 4.4e-116 422.2 295 68.5
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 4.4e-116 422.2 333 62.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 5.7e-116 421.8 295 68.8
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 7.5e-116 421.4 337 62.0
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.3e-115 420.6 317 66.6
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.3e-115 420.6 301 69.1
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.7e-115 420.2 348 62.9
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.7e-115 420.2 338 64.2
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 2.2e-115 419.9 290 68.6
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.2e-115 419.9 287 69.0
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 2.8e-115 419.5 298 68.1
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.7e-115 419.1 348 62.4
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 4.9e-115 418.7 345 61.2
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 4.9e-115 418.7 301 67.1
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 4.9e-115 418.7 301 67.1
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.9e-115 418.7 341 61.6
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 6.3e-115 418.3 292 68.5
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 8.3e-115 417.9 305 68.9
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.8e-114 416.8 298 66.4
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.8e-114 416.8 334 62.6
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.8e-114 416.8 343 61.2
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 2.4e-114 416.4 356 61.5
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.4e-114 416.4 289 68.9
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 3.1e-114 416.0 284 69.4
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 3.1e-114 416.0 285 70.2
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 4.1e-114 415.6 348 62.4
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 5.4e-114 415.2 299 67.9
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 7.0e-114 414.8 334 63.2
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 9.2e-114 414.5 334 62.3
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 9.2e-114 414.5 290 69.3
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 2.0e-113 413.3 334 62.9
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.7e-113 412.9 285 69.1
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 5.9e-113 411.8 287 69.3
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.7e-112 410.2 281 69.4
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.9e-112 409.5 272 70.2
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 3.8e-112 409.1 338 61.2
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 8.6e-112 407.9 323 61.0
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.5e-111 407.1 347 60.2
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 6.1e-110 401.7 312 63.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.2e-108 397.5 309 60.8
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 4.4e-108 395.6 282 68.1
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 1.3e-107 394.0 303 65.0
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 8.3e-107 391.3 348 59.2
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 5.4e-106 388.7 286 64.3
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 4.6e-105 385.6 331 61.0
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 7.5e-100 368.2 320 56.9
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 6.4e-99 365.2 248 69.8
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 3.2e-98 362.8 345 58.3
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.6e-97 360.5 245 69.4
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.3e-96 357.5 287 62.0
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.5e-95 354.0 252 68.7
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 1.9e-95 353.6 285 60.4
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 3.3e-95 352.8 247 68.4
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.6e-94 350.5 244 68.4
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 3.4e-92 342.8 247 65.2
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.2e-91 340.1 295 53.2
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 6.4e-91 338.6 266 62.4
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 5.4e-90 335.5 290 54.1
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 3.8e-83 312.8 337 47.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 2.1e-78 297.0 227 66.5
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 6.2e-70 268.9 195 65.6
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 4.8e-62 242.7 307 43.3
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 6.9e-61 238.8 144 75.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 4.5e-52 209.5 143 72.7
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 9.0e-45 185.3 138 69.6
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.2e-36 158.3 109 67.9
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 7.7e-36 155.6 115 60.9
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.7e-35 154.5 283 34.6
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.2e-35 154.1 111 64.9
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.2e-34 150.2 156 52.6
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.0e-31 141.0 105 69.5
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 6.3e-30 136.0 88 70.5
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.7e-22 111.3 153 43.8
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.5e-18 98.2 139 40.3
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.1e-13 82.0 55 61.8
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.2e-11 74.3 49 65.3
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.9e-10 71.2 105 46.7
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-07 61.6 42 64.3


User provided reference genes

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