Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 3.8e-196 688.0 344 100.0
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 5.1e-156 554.7 347 79.5
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 2.7e-149 532.3 348 74.4
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.4e-142 510.0 345 74.2
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 3.0e-140 502.3 347 74.1
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.5e-139 500.0 352 72.2
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.3e-138 496.9 348 75.3
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.1e-137 493.8 348 72.1
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.8e-137 493.0 352 70.2
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 6.9e-137 491.1 361 70.4
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.3e-135 486.9 356 70.5
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 4.9e-135 485.0 356 70.2
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.9e-135 485.0 346 69.7
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 6.4e-135 484.6 361 69.8
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 6.4e-135 484.6 357 70.9
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 8.4e-135 484.2 351 68.9
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.1e-134 483.8 352 71.3
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 2.4e-134 482.6 355 68.7
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.4e-134 482.6 355 68.7
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 3.2e-134 482.3 368 68.5
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 3.2e-134 482.3 362 70.2
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 5.4e-134 481.5 350 70.3
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 7.1e-134 481.1 356 68.5
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 9.3e-134 480.7 356 68.5
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 9.3e-134 480.7 347 69.7
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 9.3e-134 480.7 358 69.8
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.6e-133 479.9 345 71.0
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 1.6e-133 479.9 348 70.1
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.1e-133 479.6 354 70.1
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.7e-133 479.2 347 69.7
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.5e-133 478.8 345 69.0
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.5e-133 478.8 352 68.8
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 4.6e-133 478.4 347 70.0
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 7.9e-133 477.6 357 70.9
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.3e-132 476.9 348 71.6
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 1.3e-132 476.9 374 67.9
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 1.3e-132 476.9 374 67.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 1.3e-132 476.9 363 69.4
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.8e-132 476.5 357 70.0
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.3e-132 476.1 356 69.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.0e-132 475.7 352 68.8
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 5.1e-132 474.9 350 70.0
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 1.5e-131 473.4 351 69.8
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.5e-131 473.4 353 68.8
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.5e-131 473.4 353 68.8
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 4.3e-131 471.9 351 68.7
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 7.4e-131 471.1 353 68.6
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 9.6e-131 470.7 361 67.3
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 9.6e-131 470.7 357 68.1
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 2.1e-130 469.5 349 69.3
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.1e-130 469.5 362 68.0
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 2.8e-130 469.2 363 66.4
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 8.1e-130 467.6 360 67.5
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.1e-129 467.2 356 67.7
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.1e-129 467.2 344 69.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.4e-129 466.8 359 65.7
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.8e-129 466.5 357 67.8
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 2.4e-129 466.1 370 67.0
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 4.0e-129 465.3 377 66.6
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 5.3e-129 464.9 355 68.7
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.2e-128 463.8 364 67.3
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.2e-128 463.8 364 67.3
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.6e-128 462.6 341 68.9
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 2.6e-128 462.6 364 67.0
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 3.4e-128 462.2 355 65.4
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 4.5e-128 461.8 350 68.6
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 7.6e-128 461.1 353 70.3
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.0e-127 460.7 354 67.2
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.3e-127 460.3 350 68.9
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 1.3e-127 460.3 430 59.8
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 2.9e-127 459.1 350 68.3
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 4.9e-127 458.4 363 64.5
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 6.5e-127 458.0 363 63.6
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 1.9e-126 456.4 361 64.3
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 2.5e-126 456.1 345 68.1
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-126 455.7 295 76.9
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 3.2e-126 455.7 366 63.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 4.2e-126 455.3 361 65.9
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.5e-126 454.9 349 66.5
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 5.5e-126 454.9 363 65.0
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 7.1e-126 454.5 351 65.8
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.2e-125 453.8 345 66.7
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.6e-125 453.4 364 62.9
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.6e-125 453.4 360 63.6
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 6.0e-125 451.4 363 63.1
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.0e-124 450.7 360 63.3
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.0e-124 450.7 360 63.3
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.3e-124 450.3 363 62.8
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.8e-124 449.9 362 63.0
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.3e-124 449.5 357 63.9
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 2.3e-124 449.5 356 63.8
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 5.1e-124 448.4 346 67.1
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 8.7e-124 447.6 345 65.8
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 5.7e-123 444.9 346 64.7
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.1e-121 440.7 350 63.7
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.1e-121 440.7 348 66.4
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 2.4e-121 439.5 317 72.9
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.7e-117 426.0 344 63.7
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 7.9e-117 424.5 366 63.1
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.3e-116 423.7 369 62.9
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.8e-114 416.0 239 84.9
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 3.7e-114 415.6 361 59.6
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 3.7e-114 415.6 329 66.0
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 6.3e-114 414.8 328 65.9
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.0e-112 409.8 355 58.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 7.7e-112 407.9 325 64.3
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.0e-111 407.5 328 66.2
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 8.5e-111 404.4 344 58.7
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 4.6e-109 398.7 299 65.9
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.0e-108 396.0 298 64.1
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 7.2e-102 374.8 318 61.6
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.8e-100 370.2 345 55.9
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.1e-99 367.5 285 68.4
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 6.3e-98 361.7 300 58.7
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 8.2e-98 361.3 194 88.7
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.4e-97 360.5 285 69.8
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 3.5e-96 355.9 348 52.9
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.2e-95 353.2 194 85.1
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.1e-94 350.9 194 85.6
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.9e-94 350.1 302 58.6
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.2e-94 349.4 300 56.3
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.5e-94 348.6 348 54.3
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 3.6e-93 345.9 355 52.7
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 6.1e-93 345.1 282 67.7
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 9.7e-91 337.8 298 58.7
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 7.3e-70 268.5 153 83.0
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.0e-60 238.0 126 86.5
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.0e-60 238.0 208 60.1
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.7e-47 194.1 207 54.1
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.4e-43 179.9 100 83.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.9e-42 176.0 91 86.8
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-41 173.7 179 57.0
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 3.3e-30 136.7 101 71.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 5.3e-28 129.4 88 71.6
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 3.4e-27 126.7 73 76.7
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.7e-26 124.4 156 49.4
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 1.7e-26 124.4 73 75.3
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 2.9e-26 123.6 135 55.6
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 6.6e-23 112.5 231 36.4
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.1e-22 111.7 152 43.4
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.4e-20 104.0 111 50.5
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 2.4e-12 77.4 41 85.4


User provided reference genes

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