Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 0.0e+00 1191.0 601 100.0
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 3.4e-272 941.4 606 79.4
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 4.4e-272 941.0 604 80.5
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 2.4e-270 935.3 604 80.0
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 4.0e-265 917.9 625 76.0
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 9.5e-259 896.7 601 75.0
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 5.8e-256 887.5 582 76.1
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 1.3e-255 886.3 603 74.5
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 4.9e-255 884.4 601 74.5
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 4.9e-255 884.4 600 74.8
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.1e-254 883.2 602 73.9
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.4e-254 882.9 601 74.4
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 2.4e-254 882.1 600 74.5
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 4.6e-253 877.9 599 72.6
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 1.0e-252 876.7 552 77.7
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 1.3e-252 876.3 547 78.4
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 1.7e-252 875.9 601 73.0
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.9e-252 874.8 600 73.3
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 3.9e-252 874.8 602 74.1
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 1.1e-251 873.2 603 74.3
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.5e-251 872.8 553 77.0
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 9.5e-251 870.2 553 76.9
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.2e-250 869.8 613 71.8
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.6e-250 869.4 547 77.5
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 2.8e-250 868.6 552 78.4
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 2.8e-250 868.6 598 72.9
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 2.3e-249 865.5 601 73.2
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 3.1e-249 865.1 551 78.2
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 5.2e-249 864.4 565 76.3
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 1.5e-248 862.8 552 77.4
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 2.0e-248 862.4 600 72.5
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 5.8e-248 860.9 601 72.9
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 7.5e-248 860.5 603 71.5
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 3.7e-247 858.2 607 70.7
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 3.7e-247 858.2 604 71.4
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 4.9e-247 857.8 602 71.6
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 1.4e-246 856.3 533 78.2
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.4e-246 856.3 601 72.4
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 1.9e-246 855.9 602 72.3
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.9e-246 855.9 604 71.7
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.9e-246 855.9 589 73.2
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 5.4e-246 854.4 552 76.6
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 5.4e-246 854.4 641 69.1
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 7.1e-246 854.0 601 72.2
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 9.2e-246 853.6 605 71.4
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 9.2e-246 853.6 604 71.0
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 1.2e-245 853.2 602 71.6
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 1.0e-244 850.1 540 77.4
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 1.0e-244 850.1 531 77.6
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 1.0e-244 850.1 552 76.1
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 2.3e-244 849.0 599 72.0
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 6.6e-244 847.4 555 76.0
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 6.6e-244 847.4 600 71.8
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 2.5e-243 845.5 601 70.7
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.3e-243 845.1 534 77.5
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 9.5e-243 843.6 603 70.8
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.6e-242 842.8 600 71.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 2.1e-242 842.4 549 76.0
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 2.1e-242 842.4 585 73.2
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 2.8e-242 842.0 603 71.1
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 2.8e-242 842.0 603 71.1
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 6.2e-242 840.9 552 75.0
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 3.1e-241 838.6 550 74.0
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 8.9e-241 837.0 546 76.4
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.4e-240 835.1 535 76.6
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 4.4e-240 834.7 605 69.9
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.9e-239 832.0 542 76.2
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.4e-238 829.7 552 73.4
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 4.1e-238 828.2 590 71.5
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 7.1e-238 827.4 521 77.9
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 3.5e-237 825.1 533 74.9
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.3e-236 823.2 601 69.1
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 1.7e-236 822.8 601 69.4
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.9e-235 819.3 521 77.4
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 5.6e-235 817.8 554 73.5
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.8e-234 815.5 521 77.4
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.6e-234 815.1 519 77.3
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 8.9e-233 810.4 603 69.2
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-232 810.1 577 70.9
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 3.2e-230 802.0 589 70.3
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 6.0e-229 797.7 550 73.5
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.8e-226 788.9 528 75.4
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.6e-224 782.3 562 70.1
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 3.4e-224 781.9 551 71.3
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.7e-223 779.6 551 72.1
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 6.4e-223 777.7 601 67.2
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 5.4e-222 774.6 602 67.3
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 9.3e-222 773.9 552 72.1
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-221 773.5 554 71.1
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.0e-220 770.4 591 68.7
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 4.3e-219 765.0 532 73.1
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 5.8e-216 754.6 461 78.1
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.9e-211 739.6 529 71.1
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 9.0e-209 730.7 442 79.4
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 1.2e-208 730.3 475 76.2
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 2.0e-208 729.6 532 68.0
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 6.3e-202 708.0 528 66.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 3.2e-198 695.7 501 71.3
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.2e-198 695.3 494 70.4
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.1e-197 693.0 597 62.1
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.3e-196 690.3 510 67.8
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 9.7e-195 684.1 527 66.8
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.4e-193 680.2 604 61.1
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 2.6e-192 676.0 551 63.7
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.0e-191 674.1 450 74.7
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 3.3e-187 659.1 505 65.5
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.9e-182 643.3 384 79.9
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 4.2e-174 615.5 521 61.4
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 4.4e-163 578.9 447 64.2
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 3.1e-161 572.8 396 72.5
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.2e-120 438.0 331 63.7
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-94 349.7 253 68.4
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 5.9e-83 312.8 200 75.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-65 253.4 274 49.3
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-56 225.3 208 54.3
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 8.2e-53 212.6 143 76.2
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 7.0e-52 209.5 141 71.6
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 8.9e-39 166.0 102 74.5
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 8.9e-39 166.0 100 76.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.7e-35 154.5 101 70.3
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 3.9e-26 124.0 77 80.5
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 4.7e-24 117.1 66 80.3
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 3.1e-23 114.4 76 69.7
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.2e-22 112.5 107 56.1
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.2e-22 112.5 177 40.7
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 4.6e-19 100.5 65 72.3
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 4.6e-19 100.5 65 72.3
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 6.6e-18 96.7 68 67.6
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 6.6e-18 96.7 68 67.6
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 1.2e-16 92.4 68 67.6
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.1e-16 91.7 54 81.5
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 3.6e-16 90.9 127 48.8
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.2e-06 59.3 38 73.7
Actinidia08142 Actinidia chinensis HOM05D005895 ORTHO05D026310 5.8e-06 57.0 126 38.1


User provided reference genes

Program Settings