Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.9e-184 649.0 335 100.0
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 6.0e-154 547.7 335 84.8
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.8e-151 538.9 335 83.0
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 7.1e-147 524.2 331 79.8
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.0e-145 520.4 328 80.8
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.3e-145 520.0 331 80.1
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.9e-145 518.5 334 79.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.5e-144 516.5 353 77.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 9.6e-144 513.8 334 77.5
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 9.6e-144 513.8 334 76.9
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 2.8e-143 512.3 334 77.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.7e-143 511.9 328 80.8
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.8e-142 509.6 332 78.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 6.9e-142 507.7 334 76.0
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.5e-141 506.5 334 78.4
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.5e-141 506.5 334 75.4
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 2.6e-141 505.8 332 77.4
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 7.6e-141 504.2 334 77.8
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 7.6e-141 504.2 332 77.4
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 6.5e-140 501.1 334 77.5
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 8.5e-140 500.7 332 77.4
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.4e-139 500.0 334 77.5
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.4e-139 500.0 332 76.8
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.5e-139 499.2 332 76.2
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 3.2e-139 498.8 331 77.3
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 2.1e-138 496.1 332 76.8
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 2.1e-138 496.1 332 76.2
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.7e-138 495.7 332 76.8
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 3.6e-138 495.4 334 75.4
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 4.6e-138 495.0 332 75.9
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 4.6e-138 495.0 334 75.4
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 6.1e-138 494.6 334 75.1
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.1e-138 494.6 333 74.2
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.3e-137 493.4 334 74.9
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.8e-137 493.0 368 71.5
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.3e-137 492.7 334 75.1
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.9e-137 491.9 334 75.7
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 5.1e-137 491.5 334 76.0
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 6.7e-137 491.1 334 73.7
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 6.7e-137 491.1 334 74.3
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.9e-136 489.6 334 73.4
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 3.3e-136 488.8 334 74.9
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 4.3e-136 488.4 328 75.9
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 4.3e-136 488.4 334 74.6
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 4.3e-136 488.4 313 78.9
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 5.7e-136 488.0 332 74.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.3e-135 486.9 334 73.4
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 2.2e-135 486.1 334 74.3
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.2e-135 486.1 331 75.2
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.7e-135 485.3 335 73.4
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 4.8e-135 485.0 331 75.8
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.8e-134 483.0 334 74.9
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 2.4e-134 482.6 327 74.3
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.1e-134 482.3 335 74.3
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 5.3e-134 481.5 327 74.3
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 6.9e-134 481.1 335 74.3
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.2e-133 480.3 334 73.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 7.7e-133 477.6 334 72.5
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 1.0e-132 477.2 334 71.9
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.0e-132 477.2 334 73.4
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 3.8e-132 475.3 335 73.4
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 5.0e-132 474.9 353 70.0
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 2.5e-131 472.6 334 72.5
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 5.5e-131 471.5 334 72.2
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 7.2e-131 471.1 328 74.1
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 7.2e-131 471.1 332 72.6
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 9.4e-131 470.7 334 71.6
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.2e-130 470.3 288 84.0
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.6e-130 469.9 335 71.6
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.0e-129 467.2 334 71.3
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.0e-129 467.2 334 73.4
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 2.6e-125 452.6 334 69.8
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 7.7e-125 451.1 334 67.7
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.3e-124 450.3 351 67.2
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.7e-124 449.9 324 72.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.1e-123 447.2 328 69.8
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.4e-123 446.8 395 63.3
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 7.2e-123 444.5 327 70.9
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.4e-121 440.3 331 68.6
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 3.0e-121 439.1 329 69.0
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.5e-117 425.6 299 71.6
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.7e-116 423.3 332 68.1
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 2.1e-114 416.4 334 67.4
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 4.8e-111 405.2 334 65.0
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 6.3e-111 404.8 334 65.0
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 4.2e-107 392.1 333 61.9
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.7e-106 389.4 332 62.0
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 2.7e-101 372.9 332 56.6
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.3e-100 370.5 247 75.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 5.7e-96 355.1 334 55.4
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.0e-89 334.3 327 51.4
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.0e-88 330.1 192 84.9
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 3.2e-86 322.8 241 67.2
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.2e-85 320.9 331 50.8
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 7.8e-85 318.2 197 78.7
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.4e-80 302.4 331 47.4
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 3.2e-78 296.2 175 82.3
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 1.3e-76 290.8 207 73.9
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.7e-71 273.9 374 48.4
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 5.4e-70 268.9 321 48.0
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.0e-69 265.4 331 43.2
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.0e-68 264.6 241 60.2
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 5.2e-65 252.3 358 39.9
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 3.3e-59 233.0 168 66.1
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 6.6e-52 208.8 159 70.4
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.8e-47 193.0 171 50.3
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 4.8e-42 176.0 338 33.1
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.1e-41 173.3 289 40.8
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.1e-41 173.3 289 40.8
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 4.3e-35 152.9 132 63.6
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 6.2e-34 149.1 130 60.8
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.6e-32 143.7 81 85.2
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.7e-23 114.4 343 27.4
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.0e-20 105.1 74 64.9
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.2e-13 81.6 59 69.5
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.7e-12 75.9 160 37.5
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.7e-12 75.9 160 37.5


User provided reference genes

Program Settings