Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.9e-41 171.4 84 100.0
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.6e-34 147.5 77 92.2
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 4.6e-34 147.5 84 84.5
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 5.0e-33 144.1 84 82.1
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 1.9e-32 142.1 84 82.1
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.9e-32 142.1 84 81.0
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 2.5e-32 141.7 76 89.5
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 9.5e-32 139.8 75 88.0
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.3e-30 135.2 75 84.0
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 2.3e-30 135.2 75 84.0
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.0e-30 134.4 75 84.0
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.0e-30 134.4 75 84.0
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 4.0e-30 134.4 75 84.0
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.2e-29 132.9 75 82.7
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.6e-29 131.7 75 78.7
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 2.6e-29 131.7 73 84.9
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 4.4e-29 131.0 76 78.9
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.3e-28 129.4 76 76.3
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.7e-28 129.0 76 76.3
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.7e-28 129.0 75 80.0
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.7e-28 129.0 76 78.9
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 3.7e-28 127.9 76 77.6
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 3.7e-28 127.9 76 78.9
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 4.9e-28 127.5 75 76.0
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 4.9e-28 127.5 72 83.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 6.4e-28 127.1 73 80.8
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 8.3e-28 126.7 75 80.0
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 8.3e-28 126.7 73 80.8
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.1e-27 126.3 76 76.3
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.4e-27 125.9 75 76.0
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.4e-27 125.9 73 79.5
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.4e-27 125.9 73 79.5
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.4e-27 125.2 72 81.9
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 2.4e-27 125.2 73 79.5
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.4e-27 125.2 76 75.0
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 4.1e-27 124.4 76 75.0
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 4.1e-27 124.4 72 81.9
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 1.6e-26 122.5 76 75.0
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 1.6e-26 122.5 72 79.2
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 2.0e-26 122.1 73 74.0
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 2.0e-26 122.1 75 73.3
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 2.7e-26 121.7 77 74.0
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 3.5e-26 121.3 75 76.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 4.6e-26 120.9 73 76.7
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 7.8e-26 120.2 73 75.3
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 7.8e-26 120.2 75 72.0
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.0e-25 119.8 72 76.4
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 1.0e-25 119.8 73 76.7
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.0e-25 119.8 75 72.0
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.0e-25 119.8 75 70.7
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.0e-25 119.8 72 76.4
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.3e-25 119.4 72 75.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.7e-25 119.0 73 74.0
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 1.7e-25 119.0 76 72.4
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 2.3e-25 118.6 73 72.6
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.0e-25 118.2 73 72.6
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.0e-25 118.2 76 72.4
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 3.9e-25 117.9 75 74.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 8.6e-25 116.7 73 72.6
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.1e-24 116.3 73 72.6
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 1.1e-24 116.3 73 72.6
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.5e-24 115.9 73 72.6
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.5e-24 115.9 78 66.7
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 1.5e-24 115.9 73 71.2
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.5e-24 115.9 73 71.2
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.5e-24 115.9 73 71.2
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 2.5e-24 115.2 80 66.2
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 2.5e-24 115.2 80 66.2
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 2.5e-24 115.2 80 66.2
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 2.5e-24 115.2 76 71.1
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 3.3e-24 114.8 73 69.9
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 4.3e-24 114.4 67 79.1
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.6e-24 114.0 78 65.4
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.6e-24 114.0 73 71.2
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 5.6e-24 114.0 80 66.2
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 5.6e-24 114.0 80 66.2
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 5.6e-24 114.0 73 72.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.2e-23 112.8 74 67.6
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.2e-23 112.8 66 78.8
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.6e-23 112.5 72 70.8
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 4.7e-23 110.9 73 69.9
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 8.1e-23 110.2 76 68.4
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.1e-22 109.8 73 68.5
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 1.4e-22 109.4 76 69.7
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.4e-22 109.4 73 69.9
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.4e-22 109.4 76 65.8
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 1.8e-22 109.0 63 77.8
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 5.2e-22 107.5 105 55.2
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 1.5e-21 105.9 76 64.5
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 2.0e-21 105.5 76 64.5
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 2.0e-21 105.5 76 64.5
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 3.4e-21 104.8 73 65.8
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 3.4e-21 104.8 72 68.1
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 4.4e-21 104.4 76 64.5
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 4.4e-21 104.4 74 64.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 4.4e-21 104.4 74 64.9
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 4.4e-21 104.4 74 63.5
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 5.8e-21 104.0 67 70.1
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 7.5e-21 103.6 76 60.5
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 3.7e-20 101.3 76 61.8
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 8.3e-20 100.1 72 63.9
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 8.3e-20 100.1 74 63.5
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 1.9e-19 99.0 76 61.8
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 2.4e-19 98.6 74 62.2
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 5.4e-19 97.4 74 60.8
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 1.2e-18 96.3 68 64.7
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 6.6e-17 90.5 68 61.8
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 1.5e-16 89.4 115 43.5
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 4.3e-16 87.8 51 80.4
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 4.3e-16 87.8 66 62.1
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 4.4e-13 77.8 74 55.4
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 1.6e-10 69.3 57 56.1
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 4.6e-10 67.8 61 57.4
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.0e-09 66.6 42 71.4
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 1.7e-09 65.9 63 49.2
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 5.1e-09 64.3 42 66.7
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 9.6e-08 60.1 28 96.4
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 9.6e-08 60.1 41 68.3
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 9.6e-08 60.1 42 61.9
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 2.8e-07 58.5 34 76.5
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 2.8e-07 58.5 41 65.9
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 5.2e-06 54.3 41 56.1


User provided reference genes

Program Settings