Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.7e-140 501.5 252 100.0
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 2.8e-34 149.8 152 57.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 6.1e-34 148.7 153 58.8
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.0e-33 146.4 158 53.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 8.3e-31 138.3 113 65.5
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-28 131.0 102 66.7
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.7e-28 130.6 102 66.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.9e-28 129.8 158 49.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.9e-27 127.1 75 80.0
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 2.5e-27 126.7 148 51.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.5e-27 126.7 118 61.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.3e-27 126.3 161 49.1
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 4.3e-27 125.9 143 53.1
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 4.3e-27 125.9 135 54.1
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.6e-27 125.6 82 74.4
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.6e-27 125.6 82 74.4
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 7.3e-27 125.2 138 52.9
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 9.5e-27 124.8 212 41.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.6e-26 124.0 150 54.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-26 123.6 74 77.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.1e-26 123.6 75 77.3
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.8e-26 123.2 87 72.4
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.8e-26 123.2 126 54.0
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.8e-26 123.2 133 51.1
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.6e-26 122.9 73 78.1
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.6e-26 122.9 73 78.1
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 3.6e-26 122.9 155 51.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.7e-26 122.5 126 54.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.7e-26 122.5 143 51.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.7e-26 122.5 135 55.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 6.1e-26 122.1 130 53.8
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.0e-25 121.3 139 51.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.0e-25 121.3 139 56.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.4e-25 120.9 113 55.8
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-25 120.9 113 55.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-25 120.9 113 55.8
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.4e-25 120.9 140 49.3
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.8e-25 120.6 146 50.0
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 2.3e-25 120.2 71 80.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.3e-25 120.2 140 48.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.3e-25 120.2 87 71.3
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.1e-25 119.8 157 51.0
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.1e-25 119.8 148 48.0
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.0e-25 119.4 160 46.2
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.0e-25 119.4 156 48.1
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 4.0e-25 119.4 148 46.6
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 4.0e-25 119.4 148 50.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 5.2e-25 119.0 87 74.7
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.2e-25 119.0 120 55.8
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 6.8e-25 118.6 118 58.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 8.9e-25 118.2 139 51.1
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.9e-25 118.2 113 54.0
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.9e-25 118.2 113 54.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.2e-24 117.9 113 57.5
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.2e-24 117.9 131 53.4
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.5e-24 117.5 150 48.7
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-24 117.5 160 46.9
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.0e-24 117.1 84 70.2
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.0e-24 117.1 163 47.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 2.0e-24 117.1 146 51.4
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.6e-24 116.7 130 53.8
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.6e-24 116.7 123 54.5
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.4e-24 116.3 113 57.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.4e-24 115.9 160 45.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.4e-24 115.9 109 58.7
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 4.4e-24 115.9 121 57.0
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.8e-24 115.5 140 48.6
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 7.5e-24 115.2 149 49.7
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 9.8e-24 114.8 101 59.4
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.3e-23 114.4 124 54.8
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.2e-23 113.6 92 64.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.2e-23 113.6 118 58.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.2e-23 113.6 135 51.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.9e-23 113.2 139 48.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.9e-23 113.2 73 69.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 3.7e-23 112.8 99 62.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.7e-23 112.8 116 54.3
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 6.4e-23 112.1 73 69.9
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 6.4e-23 112.1 110 54.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 8.3e-23 111.7 148 48.0
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 8.3e-23 111.7 155 47.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 8.3e-23 111.7 97 59.8
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.4e-22 110.9 134 52.2
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.9e-22 110.5 72 70.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.4e-22 110.2 139 50.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 3.2e-22 109.8 135 49.6
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.2e-22 109.8 148 47.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 5.4e-22 109.0 145 48.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 9.2e-22 108.2 127 51.2
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 9.2e-22 108.2 137 49.6
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 9.2e-22 108.2 138 49.3
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.2e-21 107.8 136 50.0
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.6e-21 107.5 84 66.7
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.6e-21 107.5 147 44.9
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.5e-21 106.3 91 60.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 6.0e-21 105.5 91 60.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 6.0e-21 105.5 91 60.4
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.1e-19 101.3 84 59.5
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 7.3e-19 98.6 120 50.8
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.2e-18 97.8 69 68.1
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.8e-17 94.0 65 69.2
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.8e-17 94.0 61 72.1
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 4.0e-17 92.8 62 71.0
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 8.9e-17 91.7 51 86.3
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.2e-16 91.3 90 54.4
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.5e-16 90.9 144 41.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.4e-14 83.6 111 44.1
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.6e-10 70.9 95 38.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.4e-09 67.8 160 34.4
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.4e-09 67.8 215 33.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.2e-08 64.7 34 79.4
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.5e-08 64.3 39 71.8
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 5.8e-08 62.4 59 59.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 7.6e-08 62.0 33 75.8
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 6.4e-07 58.9 115 42.6
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 5.4e-06 55.8 64 50.0


User provided reference genes

Program Settings