Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05758 Selenicereus undatus HOM05D000414 ORTHO05D000276 4.8e-41 170.6 81 100.0
EL10Ac6g14451 Beta vulgaris HOM05D000414 ORTHO05D000276 9.2e-16 86.7 47 78.7
Ah.02g127050 Amaranthus hybridus HOM05D000414 ORTHO05D000276 1.7e-14 82.4 48 72.9
AUR62002901 Chenopodium quinoa HOM05D000414 ORTHO05D000276 9.5e-13 76.6 47 68.1
AUR62035260 Chenopodium quinoa HOM05D000414 ORTHO05D000276 2.1e-12 75.5 59 57.6
Sc04g0005000 Simmondsia chinensis HOM05D000414 ORTHO05D000276 1.2e-10 69.7 45 64.4
RcHm_v2.0_Chr4g0435591 Rosa chinensis HOM05D000414 ORTHO05D000276 4.9e-09 64.3 55 47.3
FvH4_4g27730 Fragaria vesca HOM05D000414 ORTHO05D000276 8.3e-09 63.5 63 44.4
CAN.G656.33 Capsicum annuum HOM05D000414 ORTHO05D000276 1.4e-08 62.8 43 55.8
Sopen05g005430 Solanum pennellii HOM05D000414 ORTHO05D000276 1.9e-08 62.4 43 55.8
Prupe.1G307500 Prunus persica HOM05D000414 ORTHO05D000276 2.4e-08 62.0 43 55.8
PGSC0003DMG400012970 Solanum tuberosum HOM05D000414 ORTHO05D000276 4.1e-08 61.2 43 53.5
FAN12G1498 Fragaria x ananassa HOM05D000414 ORTHO05D000276 5.4e-08 60.8 51 49.0
Thecc.02G358600 Theobroma cacao HOM05D000414 ORTHO05D000276 7.1e-08 60.5 49 53.1
GSVIVG01011928001 Vitis vinifera HOM05D000414 ORTHO05D000276 1.2e-07 59.7 43 58.1
Ciclev10033925m.g Citrus clementina HOM05D000414 ORTHO05D000276 2.1e-07 58.9 43 53.5
PGR119G0181 Punica granatum HOM05D000414 ORTHO05D000276 2.1e-07 58.9 40 57.5
Oeu064743.1 Olea europaea HOM05D000414 ORTHO05D000276 4.6e-07 57.8 43 55.8
Cfa019808 Carpinus fangiana HOM05D000414 ORTHO05D000276 1.0e-06 56.6 51 49.0
Haze_18648 Corylus avellana HOM05D000414 ORTHO05D000276 1.0e-06 56.6 51 49.0
Haze_18650 Corylus avellana HOM05D000414 ORTHO05D000276 1.0e-06 56.6 51 49.0
Aqoxy3G03937 Aquilegia oxysepala HOM05D000414 ORTHO05D000276 1.3e-06 56.2 41 56.1
Glyma.01G084000 Glycine max HOM05D000414 ORTHO05D000276 1.3e-06 56.2 49 49.0
Hma1.2p1_0030F.1_g018280 Hydrangea macrophylla HOM05D000414 ORTHO05D000276 1.3e-06 56.2 43 53.5
Aa31LG1G220 Aethionema arabicum HOM05D000414 ORTHO05D000276 2.3e-06 55.5 50 46.0
Ah.10g037570 Amaranthus hybridus HOM05D000414 ORTHO05D000276 2.3e-06 55.5 52 46.2
Potri.010G127800 Populus trichocarpa HOM05D000414 ORTHO05D000276 2.3e-06 55.5 43 53.5
PGR119G0275 Punica granatum HOM05D000414 ORTHO05D000276 3.9e-06 54.7 41 58.5
CANSAT64G0656 Cannabis sativa HOM05D000414 ORTHO05D000276 6.6e-06 53.9 46 50.0
CiPaw.03G090000 Carya illinoinensis HOM05D000414 ORTHO05D000276 6.6e-06 53.9 47 46.8
Glyma.09G187000 Glycine max HOM05D000414 ORTHO05D000276 8.6e-06 53.5 49 51.0
Os10g0112100 Oryza sativa ssp. japonica HOM05D000414 ORTHO05D000276 8.6e-06 53.5 44 47.7
VMungo0464G0548 Vigna mungo HOM05D000414 ORTHO05D000276 8.6e-06 53.5 49 51.0


User provided reference genes

Program Settings