Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05630 Selenicereus undatus HOM05D005301 ORTHO05D006433 5.2e-194 681.0 382 100.0
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 5.3e-146 521.5 373 83.6
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.7e-112 410.2 372 61.3
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 6.5e-112 408.3 372 66.9
Ah.08g218140 Amaranthus hybridus HOM05D005301 ORTHO05D006433 6.3e-107 391.7 393 62.3
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 4.1e-106 389.0 381 61.7
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 6.5e-104 381.7 374 65.2
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 3.2e-103 379.4 388 62.4
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 5.5e-103 378.6 386 56.2
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.2e-103 378.3 385 64.7
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 9.4e-103 377.9 390 62.6
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 1.2e-102 377.5 392 62.2
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 2.1e-102 376.7 386 64.5
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 2.1e-102 376.7 386 64.5
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 8.0e-102 374.8 390 61.3
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.8e-101 373.6 385 56.1
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 2.3e-101 373.2 370 65.7
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 2.3e-101 373.2 391 61.1
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 5.2e-101 372.1 366 64.5
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 8.8e-101 371.3 382 59.2
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 1.2e-100 370.9 374 61.0
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 1.5e-100 370.5 388 62.4
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 1.5e-100 370.5 377 62.9
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 2.0e-100 370.2 399 61.9
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 2.6e-100 369.8 375 60.8
COL.COLO4_09264 Corchorus olitorius HOM05D005301 ORTHO05D006433 5.7e-100 368.6 391 55.2
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 5.7e-100 368.6 391 60.6
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 5.7e-100 368.6 386 59.6
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 1.3e-99 367.5 375 60.8
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 1.3e-99 367.5 383 61.6
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 1.3e-99 367.5 383 61.1
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 1.3e-99 367.5 391 60.9
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 1.7e-99 367.1 392 62.2
VMungo1309G2118 Vigna mungo HOM05D005301 ORTHO05D006433 1.7e-99 367.1 377 61.3
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 2.2e-99 366.7 379 59.6
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 2.2e-99 366.7 383 59.8
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 3.7e-99 365.9 378 61.9
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 4.8e-99 365.5 382 61.0
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 6.3e-99 365.2 385 58.7
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 6.3e-99 365.2 380 58.9
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 1.8e-98 363.6 377 62.3
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 1.8e-98 363.6 381 61.2
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 1.8e-98 363.6 381 62.7
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 1.8e-98 363.6 389 59.9
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 3.1e-98 362.8 371 62.8
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 3.1e-98 362.8 390 61.8
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 4.1e-98 362.5 376 59.6
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 5.4e-98 362.1 394 53.0
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 5.4e-98 362.1 394 61.2
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 7.0e-98 361.7 389 59.4
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 9.1e-98 361.3 390 54.1
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 1.2e-97 360.9 368 64.1
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 3.5e-97 359.4 370 63.0
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 1.0e-96 357.8 377 61.3
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 1.3e-96 357.5 362 64.6
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 5.0e-96 355.5 383 59.3
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 5.0e-96 355.5 378 59.5
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 5.0e-96 355.5 409 59.4
TPR.G3295 Trifolium pratense HOM05D005301 ORTHO05D006433 1.1e-95 354.4 386 60.4
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 1.5e-95 354.0 388 60.6
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 2.5e-95 353.2 379 59.9
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 2.5e-95 353.2 394 56.9
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 3.2e-95 352.8 376 57.4
DCAR_016415 Daucus carota HOM05D005301 ORTHO05D006433 4.2e-95 352.4 380 53.4
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 1.2e-94 350.9 381 59.3
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 1.6e-94 350.5 380 61.8
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 2.7e-94 349.7 385 61.3
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 3.6e-94 349.4 384 59.4
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 3.6e-94 349.4 384 60.2
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 4.7e-94 349.0 389 57.8
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 4.7e-94 349.0 385 59.2
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 6.1e-94 348.6 391 59.3
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 8.0e-94 348.2 380 59.7
Ca_16092_v3 Cicer arietinum L. HOM05D005301 ORTHO05D006433 1.8e-93 347.1 377 52.5
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 2.3e-93 346.7 376 56.9
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 5.2e-93 345.5 381 59.1
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 6.8e-93 345.1 360 61.4
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 6.8e-93 345.1 381 60.4
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 1.5e-92 344.0 368 59.5
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 4.4e-92 342.4 363 62.3
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 4.4e-92 342.4 376 61.7
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 1.7e-91 340.5 385 55.6
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 8.3e-91 338.2 414 57.5
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 1.1e-90 337.8 383 57.7
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 1.4e-90 337.4 381 56.7
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 7.0e-90 335.1 375 55.5
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 2.7e-89 333.2 429 48.5
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 2.7e-89 333.2 360 60.3
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 1.9e-87 327.0 394 57.1
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.0e-85 321.2 372 51.1
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 1.4e-85 320.9 401 55.6
MELO3C026231.2 Cucumis melo HOM05D005301 ORTHO05D006433 1.8e-85 320.5 373 56.6
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 9.2e-82 308.1 351 56.1
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 1.2e-81 307.8 382 49.2
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 1.3e-80 304.3 346 59.2
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 9.5e-79 298.1 366 48.6
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 9.5e-79 298.1 360 55.0
Lj9A475G62 Lonicera japonica HOM05D005301 ORTHO05D006433 8.0e-78 295.0 436 43.3
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 1.3e-72 277.7 371 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 6.2e-70 268.9 359 51.8
HPP92_004591 Vanilla planifolia HOM05D005301 ORTHO05D006433 8.1e-70 268.5 356 53.9
unitig_899.g15425 Utricularia gibba HOM05D005301 ORTHO05D006433 5.2e-69 265.8 331 52.9
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 6.4e-67 258.8 352 52.3
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.4e-66 256.9 365 39.5
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 1.2e-65 254.6 382 51.8
MBI06_g32519_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 4.9e-51 206.1 188 68.6
CSS0025438 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 1.2e-49 201.4 247 58.7
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 1.3e-48 198.0 439 37.1
Cpa.g.sc52.36 Carica papaya HOM05D005301 ORTHO05D006433 4.8e-46 189.5 186 71.5
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 3.2e-42 176.8 159 58.5
SEGI_14135 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 1.9e-39 167.5 267 51.3
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 2.5e-39 167.2 114 70.2
MCO16G658 Micromonas commoda HOM05D005301 ORTHO05D006433 9.3e-26 122.1 225 36.0
PRCOL_00006105 Prasinoderma coloniale HOM05D005301 ORTHO05D006433 4.5e-20 103.2 215 34.0
Actinidia19384 Actinidia chinensis HOM05D005301 ORTHO05D006433 1.8e-16 91.3 83 57.8
SMO307G0058 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 2.8e-14 84.0 186 31.2
Lsat_1_v5_gn_9_521 Lactuca sativa HOM05D005301 ORTHO05D006433 4.1e-13 80.1 59 64.4
Cre09.g398200 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 1.5e-12 78.2 269 27.5
Lsat_1_v5_gn_2_63001 Lactuca sativa HOM05D005301 ORTHO05D006433 2.6e-12 77.4 59 62.7
Cre04.g217938 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 4.2e-10 70.1 216 30.1
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 4.2e-10 70.1 97 40.2
Cre04.g217925 Chlamydomonas reinhardtii HOM05D039214 ORTHO05D006433 3.9e-08 63.5 246 26.8
HPP92_004592 Vanilla planifolia HOM05D004180 ORTHO05D005323 1.5e-07 61.6 43 65.1
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.3e-07 60.5 78 43.6
Nitab4.5_0013392g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.3e-06 56.2 35 71.4


User provided reference genes

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