Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05604 Selenicereus undatus HOM05D002957 ORTHO05D007941 1.6e-132 476.1 233 100.0
AUR62022097 Chenopodium quinoa HOM05D002957 ORTHO05D007941 2.5e-58 229.6 231 55.0
Sc04g0001210 Simmondsia chinensis HOM05D002957 ORTHO05D007941 4.3e-58 228.8 233 53.6
AUR62001223 Chenopodium quinoa HOM05D002957 ORTHO05D007941 7.4e-58 228.0 230 54.8
Oeu063270.2 Olea europaea HOM05D002957 ORTHO05D007941 7.4e-58 228.0 233 54.1
Dinv38506 Davidia involucrata HOM05D002957 ORTHO05D007941 1.3e-57 227.3 229 54.6
CSS0001501 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 1.6e-57 226.9 233 53.2
FAN08G0527 Fragaria x ananassa HOM05D002957 ORTHO05D007941 4.8e-57 225.3 233 51.9
RcHm_v2.0_Chr7g0192141 Rosa chinensis HOM05D002957 ORTHO05D007941 4.8e-57 225.3 233 51.9
FAN18G4082 Fragaria x ananassa HOM05D000025 ORTHO05D007941 6.2e-57 224.9 233 51.9
Ciclev10021427m.g Citrus clementina HOM05D002957 ORTHO05D007941 8.1e-57 224.6 233 53.2
FvH4_5g06601 Fragaria vesca HOM05D002957 ORTHO05D007941 8.1e-57 224.6 233 51.9
CSS0023443 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 1.1e-56 224.2 233 52.8
Actinidia36761 Actinidia chinensis HOM05D002957 ORTHO05D007941 1.4e-56 223.8 233 53.2
MD06G1224500 Malus domestica HOM05D002957 ORTHO05D007941 3.1e-56 222.6 233 52.4
GSVIVG01007604001 Vitis vinifera HOM05D002957 ORTHO05D007941 3.1e-56 222.6 233 52.8
EL10Ac7g18022 Beta vulgaris HOM05D002957 ORTHO05D007941 4.0e-56 222.2 233 52.8
Lj1g0012275 Lotus japonicus HOM05D002957 ORTHO05D007941 4.0e-56 222.2 233 52.4
Nn3g16664 Nelumbo nucifera HOM05D002957 ORTHO05D007941 4.0e-56 222.2 233 52.8
Hma1.2p1_1092F.1_g255880 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 5.3e-56 221.9 232 52.2
SalBow5G1405 Salvia bowleyana HOM05D002957 ORTHO05D007941 1.2e-55 220.7 233 51.5
Sopen12g011690 Solanum pennellii HOM05D002957 ORTHO05D007941 1.2e-55 220.7 233 52.4
ClCG06G017470 Citrullus lanatus HOM05D002957 ORTHO05D007941 2.6e-55 219.5 233 50.6
Lj1g0016898 Lotus japonicus HOM05D002957 ORTHO05D007941 2.6e-55 219.5 233 51.5
Peaxi162Scf00801g00733 Petunia axillaris HOM05D002957 ORTHO05D007941 2.6e-55 219.5 233 54.1
TAR622G0090 Trochodendron aralioides HOM05D002957 ORTHO05D007941 3.4e-55 219.2 233 51.9
Haze_07617 Corylus avellana HOM05D002957 ORTHO05D007941 9.9e-55 217.6 233 52.4
Nitab4.5_0001377g0020 Nicotiana tabacum HOM05D002957 ORTHO05D007941 1.3e-54 217.2 233 51.1
Potri.015G086100 Populus trichocarpa HOM05D002957 ORTHO05D007941 1.3e-54 217.2 233 50.6
DCAR_026193 Daucus carota HOM05D002957 ORTHO05D007941 1.7e-54 216.9 232 50.9
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 1.7e-54 216.9 230 52.6
VMungo1309G1657 Vigna mungo HOM05D002957 ORTHO05D007941 1.7e-54 216.9 233 51.1
Cfa019259 Carpinus fangiana HOM05D002957 ORTHO05D007941 3.8e-54 215.7 233 52.4
Cc04_g11180 Coffea canephora HOM05D002957 ORTHO05D007941 4.9e-54 215.3 233 50.2
Phvul.009G171900 Phaseolus vulgaris HOM05D002957 ORTHO05D007941 6.4e-54 214.9 233 50.2
CsaV3_1G000990 Cucumis sativus L. HOM05D002957 ORTHO05D007941 8.4e-54 214.5 233 49.4
Sabra15G0109000 Salix brachista HOM05D002957 ORTHO05D007941 8.4e-54 214.5 233 50.6
CAN.G59.20 Capsicum annuum HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 51.1
CiPaw.11G016500 Carya illinoinensis HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 49.8
Eucgr.B00189 Eucalyptus grandis HOM05D002957 ORTHO05D007941 1.1e-53 214.2 242 49.6
Gohir.D12G188700 Gossypium hirsutum HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 51.1
Gorai.008G202600 Gossypium raimondii HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 51.1
Lj5A132G82 Lonicera japonica HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 50.2
Nitab4.5_0000025g0240 Nicotiana tabacum HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 50.6
PGR083G0505 Punica granatum HOM05D002957 ORTHO05D007941 1.1e-53 214.2 233 50.6
Duzib084G0342 Durio zibethinus HOM05D002957 ORTHO05D007941 3.2e-53 212.6 233 50.2
Aqoxy5G03698 Aquilegia oxysepala HOM05D002957 ORTHO05D007941 4.2e-53 212.2 223 52.0
MELO3C026250.2 Cucumis melo HOM05D002957 ORTHO05D007941 4.2e-53 212.2 233 48.9
TWI39G0012 Tripterygium wilfordii HOM05D002957 ORTHO05D007941 5.5e-53 211.8 233 49.8
CANSAT80G1905 Cannabis sativa HOM05D002957 ORTHO05D007941 7.1e-53 211.5 233 50.6
Atru.chr9.2618 Acer truncatum HOM05D002957 ORTHO05D007941 9.3e-53 211.1 233 49.4
Migut.O00181 Erythranthe guttata HOM05D002957 ORTHO05D007941 9.3e-53 211.1 226 50.9
Lsat_1_v5_gn_1_28561 Lactuca sativa HOM05D002957 ORTHO05D007941 1.2e-52 210.7 233 49.4
Sed0027100 Sechium edule HOM05D002957 ORTHO05D007941 1.2e-52 210.7 233 48.5
Glyma.06G175800 Glycine max HOM05D002957 ORTHO05D007941 1.6e-52 210.3 233 49.4
HanXRQChr02g0035391 Helianthus annuus HOM05D002957 ORTHO05D007941 2.7e-52 209.5 233 49.4
Rhsim12G0169500 Rhododendron simsii HOM05D002957 ORTHO05D007941 2.7e-52 209.5 233 50.6
PSO063G7275 Papaver somniferum HOM05D002957 ORTHO05D007941 6.0e-52 208.4 231 47.2
Medtr3g075540 Medicago truncatula HOM05D002957 ORTHO05D007941 1.0e-51 207.6 233 49.8
PSO210G3123 Papaver somniferum HOM05D002957 ORTHO05D007941 1.0e-51 207.6 231 47.2
THA.LOC104809647 Tarenaya hassleriana HOM05D002957 ORTHO05D007941 1.3e-51 207.2 233 49.4
Thecc.03G117300 Theobroma cacao HOM05D002957 ORTHO05D007941 1.3e-51 207.2 233 48.5
Lalb_Chr11g0069861 Lupinus albus HOM05D002957 ORTHO05D007941 1.8e-51 206.8 233 48.5
arahy.Tifrunner.gnm1.ann1.DF1MTK Arachis hypogaea HOM05D002957 ORTHO05D007941 2.3e-51 206.5 246 47.6
TPR.G35599 Trifolium pratense HOM05D002957 ORTHO05D007941 2.3e-51 206.5 245 48.2
AL7G28440 Arabidopsis lyrata HOM05D002957 ORTHO05D007941 3.9e-51 205.7 233 48.1
Thhalv10025885m.g Eutrema salsugineum HOM05D002957 ORTHO05D007941 5.1e-51 205.3 233 48.1
Sp7g22730 Schrenkiella parvula HOM05D002957 ORTHO05D007941 6.7e-51 204.9 233 48.1
AT4G24750 Arabidopsis thaliana HOM05D002957 ORTHO05D007941 8.7e-51 204.5 233 48.1
Cpa.g.sc159.6 Carica papaya HOM05D002957 ORTHO05D007941 4.3e-50 202.2 230 49.1
unitig_8.g3070 Utricularia gibba HOM05D002957 ORTHO05D007941 7.4e-50 201.4 233 47.2
Carub.0007s1631 Capsella rubella HOM05D002957 ORTHO05D007941 1.3e-49 200.7 233 47.2
Aa31LG7G11100 Aethionema arabicum HOM05D002957 ORTHO05D007941 2.1e-49 199.9 233 47.2
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 6.2e-49 198.4 230 47.8
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 6.2e-49 198.4 230 47.8
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 6.2e-49 198.4 230 47.8
CARHR232120 Cardamine hirsuta HOM05D002957 ORTHO05D007941 8.2e-49 198.0 233 47.2
CDE08G1276 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 3.1e-48 196.1 226 46.9
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 5.3e-48 195.3 229 47.2
BcaC09g50835 Brassica carinata HOM05D002957 ORTHO05D007941 1.5e-47 193.7 238 46.6
SGA_v2.0_scaffold90G27815 Striga asiatica HOM05D002957 ORTHO05D007941 1.0e-46 191.0 218 50.0
arahy.Tifrunner.gnm1.ann1.0G1QRI Arachis hypogaea HOM05D002957 ORTHO05D007941 6.5e-46 188.3 233 46.4
MBI10_g44128_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D007941 5.5e-45 185.3 217 48.4
COL.COLO4_37865 Corchorus olitorius HOM05D002957 ORTHO05D007941 7.1e-45 184.9 115 78.3
vmacro22887 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 7.1e-45 184.9 242 44.6
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 7.1e-45 184.9 242 44.6
QL03p060389 Quercus lobata HOM05D002957 ORTHO05D007941 6.0e-44 181.8 102 86.3
Os02g0596000 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D007941 5.7e-42 175.3 233 42.1
CiPaw.11G016200 Carya illinoinensis HOM05D002957 ORTHO05D007941 8.2e-41 171.4 221 46.2
Zm00001eb246160 Zea mays HOM05D002957 ORTHO05D007941 2.4e-40 169.9 230 41.7
AagrBONN_evm.TU.Sc2ySwM_344.1972 Anthoceros agrestis HOM05D002957 ORTHO05D007941 4.6e-36 155.6 229 38.4
Mapoly0042s0113 Marchantia polymorpha HOM05D002957 ORTHO05D007941 3.0e-35 152.9 230 37.8
DCAR_011893 Daucus carota HOM05D002957 ORTHO05D007941 2.8e-33 146.4 85 83.5
Dinv11135 Davidia involucrata HOM05D002957 ORTHO05D007941 1.8e-32 143.7 77 87.0
Ah.08g218480 Amaranthus hybridus HOM05D002957 ORTHO05D007941 1.5e-31 140.6 190 43.2
Prupe.5G163400 Prunus persica HOM05D002957 ORTHO05D007941 1.5e-31 140.6 181 44.8
Pp3c6_20980 Physcomitrium patens HOM05D002957 ORTHO05D007941 4.5e-31 139.0 230 33.9
Solyc12g021340.3 Solanum lycopersicum HOM05D002957 ORTHO05D007941 7.7e-31 138.3 181 44.2
SEGI_01299 Sequoiadendron giganteum HOM05D002957 ORTHO05D007941 2.2e-30 136.7 93 69.9
SMO364G0570 Selaginella moellendorffii HOM05D002957 ORTHO05D007941 6.5e-30 135.2 232 34.9
Gohir.A12G185900 Gossypium hirsutum HOM05D002957 ORTHO05D007941 3.2e-29 132.9 182 43.4
Pp3c7_15530 Physcomitrium patens HOM05D002957 ORTHO05D007941 7.9e-28 128.3 230 32.2
CBR_g34898 Chara braunii HOM05D002957 ORTHO05D007941 4.4e-26 122.5 227 33.5
SalBow5G3338 Salvia bowleyana HOM05D002957 ORTHO05D007941 5.0e-22 109.0 181 38.1
QL10p006228 Quercus lobata HOM05D002957 ORTHO05D007941 1.8e-19 100.5 165 38.2
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 6.7e-19 98.6 220 36.4
MD14G1168500 Malus domestica HOM05D002957 ORTHO05D007941 1.3e-17 94.4 80 63.8
Sc04g0001230 Simmondsia chinensis HOM05D002957 ORTHO05D007941 1.1e-16 91.3 165 36.4
Solyc01g058220.3 Solanum lycopersicum HOM05D002957 ORTHO05D007941 1.1e-16 91.3 160 35.0
Eucgr.B00193 Eucalyptus grandis HOM05D002957 ORTHO05D007941 1.4e-16 90.9 158 35.4
COL.COLO4_37484 Corchorus olitorius HOM05D002957 ORTHO05D007941 1.8e-16 90.5 53 79.2
Manes.06G111900 Manihot esculenta HOM05D002957 ORTHO05D007941 2.4e-16 90.1 158 35.4
Solyc12g021330.1 Solanum lycopersicum HOM05D002957 ORTHO05D007941 1.6e-15 87.4 57 75.4
RcHm_v2.0_Chr1g0313851 Rosa chinensis HOM05D002957 ORTHO05D007941 6.5e-14 82.0 158 33.5
RcHm_v2.0_Chr3g0475211 Rosa chinensis HOM05D002957 ORTHO05D007941 1.5e-13 80.9 158 32.9
Hma1.2p1_1092F.1_g255870 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 2.5e-13 80.1 39 87.2
Cre13.g602650 Chlamydomonas reinhardtii HOM05D002957 ORTHO05D007941 9.4e-13 78.2 227 25.6
Psat5g117640 Pisum sativum HOM05D002957 ORTHO05D007941 1.0e-11 74.7 42 76.2
ATR0199G004 Amborella trichopoda HOM05D002957 ORTHO05D007941 1.8e-11 73.9 39 76.9
Glyma.04G189800 Glycine max HOM05D002957 ORTHO05D007941 6.7e-11 72.0 153 33.3
arahy.Tifrunner.gnm1.ann1.9Y89B6 Arachis hypogaea HOM05D002957 ORTHO05D082854 1.3e-06 57.8 41 70.7
Sc22g0001790 Simmondsia chinensis HOM05D002957 ORTHO05D009332 8.5e-06 55.1 71 38.0


User provided reference genes

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