Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.2e-200 703.0 353 100.0
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 8.7e-119 431.0 347 63.7
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.9e-118 429.9 349 63.0
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 5.8e-115 418.3 343 64.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 7.6e-115 417.9 350 60.9
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.9e-114 416.0 348 62.4
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.9e-114 415.2 343 63.8
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.4e-114 414.5 348 61.2
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.9e-113 413.3 343 63.8
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.0e-111 407.5 356 60.4
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.1e-110 404.1 350 60.6
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 5.6e-110 401.7 349 59.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.3e-109 400.6 349 59.6
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 2.4e-108 396.4 348 58.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.1e-108 396.0 350 59.1
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 4.0e-108 395.6 352 59.7
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.0e-107 393.3 347 59.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 5.8e-107 391.7 346 58.7
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 3.9e-103 379.0 346 57.8
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 5.1e-103 378.6 340 58.2
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 8.7e-103 377.9 349 57.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.1e-102 377.5 350 56.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.5e-102 377.1 348 60.1
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.3e-101 374.0 348 55.5
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.3e-101 374.0 347 57.1
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.1e-101 373.2 354 55.1
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 4.8e-101 372.1 353 54.4
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 4.8e-101 372.1 348 57.8
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 6.2e-101 371.7 352 58.2
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 8.2e-101 371.3 348 56.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.8e-100 370.2 346 56.1
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 2.6e-99 366.3 349 56.4
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 4.5e-99 365.5 380 52.6
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 5.8e-99 365.2 351 56.1
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.0e-98 364.4 347 56.2
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.0e-98 364.4 351 57.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 4.9e-98 362.1 349 57.0
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 1.4e-97 360.5 340 56.2
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.5e-97 359.8 349 57.0
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.5e-97 359.8 348 55.7
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 3.2e-97 359.4 347 56.5
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 5.5e-97 358.6 349 57.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.3e-97 357.8 351 56.1
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.2e-96 357.5 346 55.8
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.2e-96 357.5 345 55.4
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.2e-96 357.5 349 55.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.6e-96 357.1 347 55.6
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 3.5e-96 355.9 347 55.3
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.6e-96 355.5 351 55.3
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 6.0e-96 355.1 283 66.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.0e-95 354.4 346 54.9
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.0e-95 354.4 347 55.0
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.3e-95 354.0 346 55.5
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.8e-95 353.6 348 54.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 3.0e-95 352.8 348 54.9
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.0e-95 352.8 350 55.7
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 5.1e-95 352.1 355 54.9
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 6.7e-95 351.7 340 55.6
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.1e-94 350.9 353 55.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.5e-94 349.7 345 54.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 3.3e-94 349.4 360 53.1
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 5.7e-94 348.6 348 55.7
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.6e-94 347.8 363 53.7
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 3.7e-93 345.9 359 53.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 6.9e-92 341.7 340 54.7
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 9.0e-92 341.3 340 54.7
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.2e-91 340.9 339 55.2
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.6e-91 339.7 347 54.5
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.6e-91 339.7 338 55.3
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 5.9e-91 338.6 346 54.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.3e-90 337.4 282 61.0
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.7e-90 337.0 346 54.0
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.2e-90 336.7 352 55.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 9.3e-89 331.3 432 45.6
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 2.1e-88 330.1 363 53.2
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 2.1e-88 330.1 351 53.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.3e-87 327.4 280 58.9
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.5e-86 323.9 359 48.7
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 3.3e-86 322.8 361 47.9
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 2.8e-85 319.7 340 51.5
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 5.0e-82 308.9 338 49.7
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 8.5e-82 308.1 322 51.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 1.9e-81 307.0 356 49.2
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 9.4e-81 304.7 280 56.8
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.4e-79 300.8 311 51.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.8e-76 290.4 216 68.1
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 5.3e-76 288.9 336 48.5
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.9e-74 283.1 343 46.4
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 3.6e-72 276.2 331 46.2
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 7.4e-70 268.5 216 62.5
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 4.0e-55 219.5 175 66.3
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 9.8e-54 214.9 242 49.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 3.7e-45 186.4 141 67.4
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 2.3e-42 177.2 305 36.4
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.1e-41 174.9 176 52.3
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 9.5e-41 171.8 190 50.5
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 4.9e-37 159.5 114 67.5
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 8.0e-32 142.1 277 35.0
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.2e-30 138.3 201 43.8
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 9.2e-28 128.6 271 31.4
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.2e-27 128.3 133 54.9
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.7e-26 124.4 191 36.6
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.3e-25 119.8 167 42.5
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.2e-24 118.2 127 54.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 2.8e-24 117.1 110 56.4
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.2e-22 111.7 214 39.7
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 9.9e-22 108.6 185 36.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.0e-18 98.6 91 54.9
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.7e-16 89.7 83 50.6
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 4.0e-15 86.7 67 70.1
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 6.8e-15 85.9 66 60.6
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 9.2e-12 75.5 109 44.0


User provided reference genes

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