Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.7e-268 928.7 441 100.0
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.1e-178 629.4 451 69.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.4e-158 563.5 471 59.9
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.9e-155 553.1 471 58.2
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 9.4e-155 550.8 460 61.5
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.0e-153 547.4 451 59.0
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.5e-152 543.5 458 58.7
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 5.7e-152 541.6 456 59.6
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 5.3e-150 535.0 455 58.7
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.2e-148 529.6 456 58.8
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.9e-148 529.3 457 56.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 8.5e-148 527.7 468 55.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.5e-148 527.7 457 56.7
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.1e-147 527.3 474 56.8
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.2e-147 525.8 467 55.0
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.7e-146 521.9 467 54.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.3e-145 519.6 465 57.2
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.0e-145 519.2 468 56.6
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.2e-145 518.5 464 57.8
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 9.7e-144 514.2 465 56.8
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 5.3e-142 508.4 456 55.0
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.2e-141 507.3 469 54.2
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.5e-141 505.8 469 53.7
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 4.5e-141 505.4 464 54.1
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.3e-140 503.8 450 57.8
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 8.5e-140 501.1 464 56.9
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.2e-139 499.2 453 56.1
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.2e-139 498.0 452 56.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.6e-138 496.9 450 56.9
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.1e-138 496.5 453 54.5
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 4.7e-138 495.4 444 53.6
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.0e-137 494.2 445 55.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.8e-137 493.4 445 55.7
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.7e-135 485.7 463 52.5
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 6.3e-135 485.0 447 56.6
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 2.4e-134 483.0 453 53.9
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 2.0e-133 479.9 452 56.2
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 3.5e-133 479.2 460 53.5
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 4.5e-133 478.8 459 55.1
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 7.7e-133 478.0 392 61.7
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.9e-132 476.1 456 53.5
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.1e-131 474.2 459 54.7
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.5e-131 471.9 478 51.7
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.6e-130 470.3 477 52.2
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 3.6e-130 469.2 460 53.0
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.0e-129 467.6 462 53.5
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.0e-129 467.6 453 53.6
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 3.0e-129 466.1 465 50.3
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 5.2e-129 465.3 465 50.3
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 5.2e-129 465.3 462 52.6
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 8.8e-129 464.5 447 54.1
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.0e-128 463.4 456 53.9
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 9.8e-128 461.1 443 54.6
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.3e-127 460.7 452 54.4
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.8e-127 459.5 454 53.5
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.1e-126 457.6 453 52.1
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 9.1e-126 454.5 453 54.3
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.2e-125 454.1 462 50.9
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.0e-124 448.7 453 52.8
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 8.6e-124 448.0 463 50.5
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 1.1e-123 447.6 464 50.2
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.9e-123 446.8 453 52.5
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.5e-123 446.4 463 50.3
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 4.2e-123 445.7 473 50.7
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 4.2e-123 445.7 445 52.1
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.5e-123 444.5 453 52.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.5e-123 444.5 453 52.3
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.0e-121 439.1 450 51.6
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 5.2e-121 438.7 444 53.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 8.9e-121 438.0 438 52.7
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 3.4e-120 436.0 439 52.2
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 4.4e-120 435.6 465 49.7
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.7e-120 435.3 454 51.3
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 2.3e-116 423.3 458 48.7
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 8.6e-116 421.4 450 50.0
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.9e-115 420.2 455 48.8
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 3.3e-115 419.5 437 48.7
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.3e-115 419.5 434 49.5
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.9e-111 406.4 431 50.3
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.9e-111 406.4 442 47.3
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.3e-108 396.7 489 45.0
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.3e-107 392.9 432 47.2
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 7.3e-107 391.7 438 46.8
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.2e-106 391.0 420 46.4
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.6e-106 390.6 438 47.3
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.4e-105 387.5 434 45.6
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.8e-105 387.1 441 46.7
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 3.9e-100 369.4 439 43.7
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.4e-97 360.9 445 44.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.0e-97 359.4 316 56.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.5e-96 357.5 434 43.5
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.5e-96 357.5 434 43.5
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.4e-94 350.1 431 43.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 3.9e-92 342.8 431 43.2
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 2.5e-91 340.1 435 42.5
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 7.3e-91 338.6 431 43.2
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.0e-89 332.8 353 48.2
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 4.9e-87 325.9 307 54.7
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 7.8e-85 318.5 431 40.8
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.3e-76 291.2 274 56.6
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 7.3e-75 285.4 272 56.2
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 5.3e-73 279.3 487 34.3
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.7e-63 247.7 324 40.7
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.3e-60 238.0 304 45.1
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.1e-59 235.0 520 31.5
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 3.1e-57 226.9 425 35.5
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.2e-54 216.9 254 46.9
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.5e-43 181.4 461 29.7
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.0e-43 181.0 232 45.3
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.9e-40 169.5 150 57.3
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.2e-30 136.7 190 40.5
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.0e-28 130.6 550 24.2
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.7e-26 124.8 90 60.0
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.7e-26 123.6 99 53.5
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 9.1e-25 119.0 123 51.2
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 6.5e-23 112.8 99 54.5
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.6e-21 107.1 130 40.0
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 3.6e-21 107.1 291 29.2
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.7e-21 106.7 91 58.2
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.8e-20 104.8 85 62.4
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.0e-20 104.0 83 62.7
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 2.2e-18 97.8 165 36.4
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.0e-15 89.0 63 57.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 5.4e-09 66.6 81 40.7
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 4.5e-08 63.5 125 38.4


User provided reference genes

Program Settings