Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 1.1e-47 193.0 99 100.0
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 9.8e-36 153.3 99 74.7
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 3.1e-34 148.3 99 70.7
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 5.9e-33 144.1 99 69.7
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 1.7e-32 142.5 99 69.7
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 2.3e-32 142.1 99 67.7
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 1.5e-31 139.4 91 67.0
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 1.5e-31 139.4 99 67.7
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 2.5e-31 138.7 94 67.0
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 4.3e-31 137.9 99 63.6
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 4.3e-31 137.9 99 66.7
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 4.3e-31 137.9 99 65.7
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 5.6e-31 137.5 99 65.7
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.2e-30 136.3 111 60.4
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.2e-30 136.3 97 63.9
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 1.2e-30 136.3 97 63.9
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 2.1e-30 135.6 99 64.6
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 2.8e-30 135.2 99 65.7
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 4.7e-30 134.4 94 67.0
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 4.7e-30 134.4 99 64.6
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 6.1e-30 134.0 95 66.3
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 6.1e-30 134.0 99 62.6
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 8.0e-30 133.7 101 64.4
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 1.0e-29 133.3 99 62.6
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 1.4e-29 132.9 99 65.7
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 1.4e-29 132.9 99 61.6
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 1.4e-29 132.9 99 65.7
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 1.8e-29 132.5 91 69.2
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 2.3e-29 132.1 91 67.0
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 2.3e-29 132.1 99 60.6
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 3.0e-29 131.7 99 61.6
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 3.0e-29 131.7 99 60.6
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 5.2e-29 131.0 99 60.6
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 6.8e-29 130.6 99 63.6
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 6.8e-29 130.6 99 59.6
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 6.8e-29 130.6 100 65.0
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 1.2e-28 129.8 91 67.0
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 1.2e-28 129.8 99 61.6
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.5e-28 129.4 91 65.9
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.5e-28 129.4 91 65.9
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.0e-28 129.0 99 62.6
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 2.0e-28 129.0 99 62.6
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 2.6e-28 128.6 94 66.0
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 3.4e-28 128.3 99 61.6
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 4.4e-28 127.9 94 63.8
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 4.4e-28 127.9 99 61.6
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 7.5e-28 127.1 100 65.0
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 1.3e-27 126.3 83 69.9
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 1.3e-27 126.3 93 65.6
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 1.7e-27 125.9 103 58.3
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.7e-27 125.9 91 64.8
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 3.7e-27 124.8 95 62.1
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 6.4e-27 124.0 97 61.9
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 8.3e-27 123.6 95 60.0
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 2.4e-26 122.1 92 60.9
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 2.4e-26 122.1 93 61.3
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 2.4e-26 122.1 95 58.9
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 2.4e-26 122.1 95 61.1
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 4.1e-26 121.3 94 62.8
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 5.4e-26 120.9 95 61.1
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 5.4e-26 120.9 86 64.0
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 5.4e-26 120.9 105 57.1
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 7.0e-26 120.6 102 55.9
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.2e-26 120.2 94 58.5
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.2e-26 120.2 94 58.5
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 9.2e-26 120.2 94 58.5
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 1.2e-25 119.8 93 60.2
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 1.2e-25 119.8 93 62.4
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 2.0e-25 119.0 96 57.3
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 2.7e-25 118.6 95 61.1
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 3.5e-25 118.2 96 56.2
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 5.9e-25 117.5 103 58.3
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 7.8e-25 117.1 93 58.1
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 7.8e-25 117.1 92 58.7
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 7.8e-25 117.1 93 61.3
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 1.0e-24 116.7 93 57.0
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 1.0e-24 116.7 93 57.0
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 1.0e-24 116.7 93 58.1
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 1.3e-24 116.3 99 55.6
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 2.3e-24 115.5 93 57.0
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 2.3e-24 115.5 93 57.0
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 2.3e-24 115.5 93 57.0
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 2.3e-24 115.5 85 63.5
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 2.3e-24 115.5 93 57.0
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 3.0e-24 115.2 99 58.6
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.0e-24 114.4 91 62.6
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.0e-24 114.4 91 62.6
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 6.6e-24 114.0 100 54.0
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 1.5e-23 112.8 91 61.5
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.9e-23 112.5 93 62.4
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 2.5e-23 112.1 98 54.1
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.5e-23 112.1 91 61.5
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 2.5e-23 112.1 99 53.5
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 2.5e-23 112.1 99 53.5
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 4.3e-23 111.3 91 61.5
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 9.5e-23 110.2 115 47.8
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 1.2e-22 109.8 67 76.1
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.2e-22 109.8 96 54.2
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 1.2e-22 109.8 94 57.4
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 1.6e-22 109.4 102 56.9
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.1e-22 109.0 98 52.0
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 2.8e-22 108.6 100 56.0
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 4.7e-22 107.8 83 59.0
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 8.0e-22 107.1 99 53.5
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 8.0e-22 107.1 94 56.4
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 1.8e-21 105.9 95 53.7
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 5.2e-21 104.4 98 56.1
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 3.4e-20 101.7 83 53.0
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 3.4e-20 101.7 92 52.2
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 9.8e-20 100.1 79 62.0
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 1.3e-19 99.8 107 46.7
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.9e-19 98.6 93 49.5
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 2.9e-19 98.6 93 49.5
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 1.1e-18 96.7 64 70.3
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 5.6e-15 84.3 85 52.9
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.1e-14 80.5 60 60.0
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.3e-13 79.0 58 62.1
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 3.1e-13 78.6 96 41.7
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 7.5e-12 73.9 96 40.6
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 2.2e-11 72.4 97 39.2
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 8.3e-11 70.5 67 56.7
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 6.0e-09 64.3 100 38.0
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 2.5e-07 58.9 92 35.9
Phvul.009G072333 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 7.3e-07 57.4 44 63.6


User provided reference genes

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