Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.8e-255 884.8 449 100.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 2.2e-79 300.4 389 49.1
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.4e-65 254.6 377 45.6
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 7.8e-64 248.8 372 44.6
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.6e-46 189.5 391 35.3
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 3.4e-43 180.3 392 34.4
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.7e-42 177.9 405 37.3
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.2e-41 173.7 361 36.3
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 4.6e-40 169.9 390 34.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 2.3e-39 167.5 387 33.9
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.6e-39 166.0 365 36.4
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 6.6e-39 166.0 389 34.7
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.1e-36 157.1 388 36.1
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.0e-35 154.5 398 33.2
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-34 151.4 426 32.6
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 3.8e-34 150.2 387 32.8
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.4e-34 149.4 383 35.5
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 4.2e-33 146.7 389 30.1
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.6e-32 144.8 409 32.3
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.6e-32 144.8 420 33.8
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.7e-32 144.1 410 32.2
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.7e-32 144.1 382 32.5
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.5e-32 143.7 380 32.9
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.7e-31 141.4 364 31.0
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.3e-31 141.0 395 34.4
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.3e-31 141.0 386 32.9
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.9e-31 140.2 399 32.3
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.5e-30 138.3 389 33.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.9e-30 137.9 384 33.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.5e-30 137.5 378 33.1
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.5e-30 137.5 381 31.8
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 3.3e-30 137.1 387 33.3
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 4.3e-30 136.7 379 31.4
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 4.3e-30 136.7 389 31.1
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.6e-30 136.3 386 33.2
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 7.3e-30 136.0 366 32.8
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.6e-29 134.8 388 32.5
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.4e-28 131.0 380 33.9
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 4.0e-28 130.2 403 30.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.4e-27 127.1 366 33.6
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.4e-27 127.1 367 29.4
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.4e-27 127.1 358 31.3
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.8e-27 126.3 369 31.7
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 5.8e-27 126.3 367 29.4
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 5.8e-27 126.3 361 32.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 9.9e-27 125.6 368 31.2
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 9.9e-27 125.6 356 32.0
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.3e-26 125.2 367 29.2
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.3e-26 125.2 373 31.9
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.3e-26 125.2 358 31.3
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.2e-26 124.4 404 30.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 3.8e-26 123.6 404 31.4
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 8.4e-26 122.5 382 30.4
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.4e-25 121.7 395 29.1
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 2.7e-24 117.5 373 30.3
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 6.0e-24 116.3 407 29.7
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.1e-22 112.1 392 29.1
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.1e-21 107.8 312 33.3
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.8e-21 107.5 364 29.1
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 4.8e-21 106.7 359 29.2
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 8.1e-21 105.9 352 29.8
Ah.00g238010 Amaranthus hybridus HOM05D024306 ORTHO05D012960 1.1e-20 105.5 375 28.8
Ah.00g238020 Amaranthus hybridus HOM05D024306 ORTHO05D012960 1.4e-20 105.1 375 28.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.5e-19 101.7 357 28.0
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.0e-19 101.3 369 27.9
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 9.9e-19 99.0 375 28.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.7e-18 98.2 191 33.5
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 4.9e-18 96.7 356 29.8
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 4.9e-18 96.7 185 33.0
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.1e-17 95.5 202 32.7
Ah.11g039280 Amaranthus hybridus HOM05D024306 ORTHO05D012960 5.4e-17 93.2 229 30.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 7.1e-17 92.8 375 26.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.6e-16 91.7 408 28.9
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.6e-16 91.7 378 26.2
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 3.5e-16 90.5 266 30.5
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.9e-16 89.4 369 26.8
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.3e-15 88.6 176 35.8
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.8e-15 88.2 405 27.7
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.8e-15 88.2 402 27.1
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.8e-15 88.2 180 36.1
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 2.3e-15 87.8 114 44.7
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 3.9e-15 87.0 364 26.1
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.7e-15 85.9 371 27.0
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 5.6e-14 83.2 383 26.6
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 9.6e-14 82.4 388 27.3
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 9.6e-14 82.4 118 39.8
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.6e-13 81.6 370 27.3
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.1e-12 79.0 395 25.8
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.8e-12 78.2 372 26.9
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 2.4e-12 77.8 387 25.3
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.4e-12 77.8 373 24.7
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.0e-12 75.9 372 26.6
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 9.0e-12 75.9 168 33.3
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 2.6e-11 74.3 111 35.1
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-10 72.0 390 25.1
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.3e-10 72.0 370 24.6
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.7e-10 71.6 387 25.8
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.9e-10 70.1 383 26.6
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 6.5e-10 69.7 384 25.5
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.1e-09 68.9 394 25.9
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.1e-09 68.9 369 23.6
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.1e-09 68.9 382 25.7
Ah.05g166960 Amaranthus hybridus HOM05D006874 ORTHO05D008334 2.1e-08 64.7 78 51.3
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 3.5e-08 63.9 373 26.3
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 3.0e-07 60.8 383 23.0
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 6.7e-07 59.7 363 24.0
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.9e-06 58.2 367 22.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.3e-06 57.4 198 29.3
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 7.4e-06 56.2 387 23.3


User provided reference genes

Program Settings