Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 0.0e+00 1416.4 721 100.0
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.7e-111 407.1 686 44.2
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.4e-91 341.7 721 39.0
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.9e-72 278.1 707 34.7
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.6e-71 275.0 762 33.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 4.1e-67 260.4 772 32.0
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 4.6e-66 256.9 691 33.4
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 5.6e-64 250.0 740 32.8
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 6.2e-63 246.5 763 31.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.4e-62 245.4 760 32.0
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.3e-60 238.8 727 32.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 2.2e-60 238.0 682 32.3
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.8e-60 237.3 770 31.3
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 5.4e-59 233.4 715 32.2
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 2.7e-58 231.1 704 33.8
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 3.0e-57 227.6 763 29.8
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 7.3e-56 223.0 623 34.0
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.6e-53 214.5 758 30.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.9e-52 211.1 685 31.4
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 6.4e-52 209.9 654 31.7
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.2e-51 207.6 802 29.1
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.2e-50 205.7 788 29.9
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 6.0e-50 203.4 710 31.4
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.9e-48 198.4 747 30.9
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.3e-47 195.7 723 31.0
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.6e-47 194.1 790 27.8
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.2e-47 193.4 788 29.2
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.8e-46 191.8 793 28.5
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.1e-46 191.0 737 28.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.2e-45 189.1 763 30.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.1e-43 182.6 751 29.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.9e-43 181.8 711 30.4
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.9e-43 181.8 719 30.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.2e-43 180.6 743 31.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 4.2e-43 180.6 688 31.2
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 9.3e-43 179.5 773 30.1
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.5e-40 171.4 714 29.8
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 3.7e-39 167.5 747 28.9
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.2e-39 166.8 684 29.2
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 2.4e-38 164.9 707 28.7
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 4.0e-38 164.1 740 28.4
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 6.9e-38 163.3 803 28.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 6.9e-38 163.3 728 29.9
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.0e-37 161.8 694 29.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 2.6e-37 161.4 738 29.9
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.7e-36 158.7 682 28.9
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.4e-35 155.6 731 29.4
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.9e-35 155.2 737 29.0
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 5.5e-35 153.7 731 28.0
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 5.5e-35 153.7 689 28.4
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 3.5e-34 151.0 759 28.7
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.5e-34 151.0 737 27.8
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 6.0e-34 150.2 807 27.8
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.3e-33 149.1 694 28.8
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.7e-33 146.7 713 28.8
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 8.7e-33 146.4 688 28.5
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 8.7e-33 146.4 695 27.5
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.5e-32 144.8 741 28.9
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 5.6e-32 143.7 685 27.7
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.3e-31 142.5 501 30.3
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.3e-31 142.5 665 29.0
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.6e-31 142.1 701 29.2
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.6e-31 142.1 733 29.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 3.7e-31 141.0 700 26.9
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 3.7e-31 141.0 723 27.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 8.2e-31 139.8 739 26.5
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.1e-30 139.4 695 28.3
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-30 139.0 377 34.2
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 2.4e-30 138.3 692 26.9
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.0e-29 135.2 711 28.1
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 8.4e-28 129.8 700 27.7
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.9e-27 128.6 408 33.3
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.2e-27 127.9 546 29.1
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 2.7e-26 124.8 624 25.8
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.3e-25 122.5 652 26.7
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 3.9e-25 120.9 625 27.2
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 8.2e-23 113.2 675 25.9
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.4e-22 111.7 685 23.6
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 9.0e-22 109.8 737 26.3
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 5.9e-21 107.1 656 26.8
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 7.6e-21 106.7 615 26.5
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 8.5e-20 103.2 535 26.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-19 102.4 304 30.9
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.9e-19 102.1 726 27.5
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.2e-19 100.9 305 31.1
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 3.6e-18 97.8 568 26.4
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 7.9e-18 96.7 773 24.5
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 7.9e-18 96.7 721 26.4
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 3.0e-17 94.7 730 27.1
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 5.1e-17 94.0 560 27.3
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 6.7e-17 93.6 697 24.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 6.7e-17 93.6 134 44.0
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-16 92.8 302 31.5
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 4.3e-16 90.9 687 25.6
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 4.8e-15 87.4 570 27.4
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 6.3e-15 87.0 558 26.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 8.2e-15 86.7 732 26.5
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.9e-12 78.2 583 24.9
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 4.2e-11 74.3 639 24.7
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.6e-10 72.4 676 24.3
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 2.7e-10 71.6 119 43.7
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 3.6e-10 71.2 219 31.5
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 4.7e-10 70.9 140 39.3
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 4.7e-10 70.9 115 44.3
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.3e-09 68.6 209 32.5
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 5.1e-09 67.4 549 22.8
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 4.4e-08 64.3 176 34.7
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.8e-06 58.9 181 32.0


User provided reference genes

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