Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 8.9e-174 613.6 333 100.0
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 3.3e-19 100.1 296 32.8
EL10Ac1g02191 Beta vulgaris HOM05D030748 ORTHO05D008337 1.8e-17 94.4 216 36.6
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 9.0e-17 92.0 300 34.3
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.2e-16 91.7 157 45.9
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-16 91.3 301 35.5
EL10Ac1g02192 Beta vulgaris HOM05D030748 ORTHO05D008337 3.4e-16 90.1 338 32.0
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 3.0e-12 77.0 245 31.8
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 3.9e-12 76.6 243 34.2
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 4.3e-11 73.2 228 33.8
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 4.3e-11 73.2 170 36.5
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.3e-10 71.6 315 31.1
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.1e-10 70.9 248 32.3
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 2.8e-10 70.5 307 32.6
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 3.7e-10 70.1 170 34.7
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 8.2e-10 68.9 315 29.2
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 8.2e-10 68.9 332 27.1
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 8.2e-10 68.9 167 35.3
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 8.2e-10 68.9 183 35.0
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.4e-09 68.2 317 27.8
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.4e-09 68.2 248 30.6
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 4.1e-09 66.6 306 29.4
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 9.0e-09 65.5 166 39.2
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 1.2e-08 65.1 162 38.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.6e-08 63.9 314 29.6
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 3.4e-08 63.5 150 40.7
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 4.5e-08 63.2 291 34.7
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.0e-07 62.0 263 30.0
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.0e-07 62.0 288 30.6
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.3e-07 61.6 193 31.6
AUR62033901 Chenopodium quinoa HOM05D030748 ORTHO05D008337 6.5e-07 59.3 164 31.7
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 8.4e-07 58.9 154 40.3
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 8.4e-07 58.9 150 35.3
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 8.4e-07 58.9 313 28.8
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.1e-06 58.5 314 30.9
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.4e-06 58.2 253 28.1
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.4e-06 58.2 293 29.4
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.5e-06 57.4 252 26.6
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 4.2e-06 56.6 258 29.8
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 7.2e-06 55.8 301 27.9
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.3e-06 55.5 253 27.3
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 9.3e-06 55.5 268 27.2


User provided reference genes

Program Settings