Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.7e-199 699.1 346 100.0
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.5e-152 541.6 343 76.4
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.9e-148 528.5 376 70.2
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 7.6e-144 514.2 368 69.3
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.3e-131 471.9 343 65.6
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.2e-125 453.8 379 59.6
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.1e-125 453.0 379 60.4
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 2.1e-125 453.0 379 60.4
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 2.1e-125 453.0 365 63.0
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.6e-125 452.2 373 61.1
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.7e-125 451.8 376 59.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.4e-124 450.3 378 58.2
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.4e-124 450.3 373 59.5
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.4e-123 445.3 377 58.9
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.7e-123 444.9 381 60.4
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 8.2e-122 441.0 376 58.0
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.4e-121 440.3 376 58.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.8e-121 439.9 376 58.2
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 2.4e-121 439.5 382 58.6
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 4.1e-121 438.7 380 57.4
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 9.1e-121 437.6 379 58.3
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 9.1e-121 437.6 348 61.2
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.2e-120 437.2 374 57.8
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.7e-119 433.3 378 58.7
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.7e-119 433.3 381 57.0
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 5.0e-119 431.8 379 58.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 5.0e-119 431.8 379 57.8
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 6.5e-119 431.4 377 57.3
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.1e-118 430.6 375 57.1
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 1.1e-118 430.6 374 57.2
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.1e-118 430.6 379 57.0
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 4.2e-118 428.7 382 57.1
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.2e-118 428.7 382 57.9
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 9.4e-118 427.6 382 56.3
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.6e-117 426.8 377 56.0
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.7e-117 426.0 381 56.7
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 6.1e-117 424.9 381 57.0
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.0e-116 424.1 398 54.3
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 3.0e-116 422.5 386 56.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.9e-116 422.2 381 56.4
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.1e-115 420.6 375 57.1
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.1e-115 420.6 382 56.0
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 1.5e-115 420.2 426 53.1
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.6e-115 419.5 328 66.5
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 7.4e-115 417.9 382 55.5
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 9.7e-115 417.5 380 56.1
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.3e-114 417.2 350 59.7
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.7e-114 416.8 381 53.0
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.8e-114 416.0 380 56.1
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.8e-114 416.0 380 53.9
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 6.3e-114 414.8 374 56.1
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 6.3e-114 414.8 375 55.5
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.1e-113 414.1 373 56.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.4e-113 413.7 380 55.8
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.4e-113 413.7 381 54.1
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 9.1e-113 411.0 375 54.1
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 4.5e-112 408.7 379 55.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 5.9e-112 408.3 377 53.6
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 5.9e-112 408.3 382 53.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 5.9e-112 408.3 375 55.7
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.3e-111 407.1 381 56.7
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 2.9e-111 406.0 379 54.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.1e-110 404.1 373 54.7
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.9e-110 403.3 376 54.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.6e-109 399.1 379 52.5
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 6.1e-109 398.3 413 49.9
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.4e-108 397.1 381 53.3
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 4.0e-108 395.6 370 51.9
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.5e-107 393.7 381 54.3
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.3e-106 390.6 378 52.9
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.8e-106 389.4 364 53.8
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 4.8e-106 388.7 361 56.5
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 4.8e-106 388.7 361 56.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 6.3e-106 388.3 375 52.8
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 5.3e-105 385.2 383 53.0
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 9.1e-105 384.4 382 51.6
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 9.1e-105 384.4 352 55.7
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 4.5e-104 382.1 342 53.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 5.9e-104 381.7 385 52.7
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.0e-103 380.9 378 52.9
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 2.2e-103 379.8 385 52.5
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.2e-103 379.8 384 51.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 6.5e-103 378.3 385 52.2
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 3.2e-102 375.9 375 50.4
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.2e-101 374.0 352 54.8
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 8.0e-101 371.3 385 51.4
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 4.0e-100 369.0 345 53.0
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 6.8e-100 368.2 351 53.3
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.5e-99 367.1 374 51.1
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.5e-99 367.1 373 51.5
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.0e-99 366.7 386 51.3
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.0e-99 366.7 386 51.3
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.7e-98 363.6 364 52.5
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.1e-97 359.0 373 50.7
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 7.0e-97 358.2 396 49.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.0e-92 344.4 352 50.6
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.8e-92 341.7 326 53.1
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.2e-91 340.9 389 45.2
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.7e-90 335.9 381 45.1
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 4.1e-89 332.4 302 56.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.9e-88 328.6 355 53.8
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.7e-87 327.0 304 56.2
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 8.3e-82 308.1 360 44.4
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.0e-80 303.5 372 42.5
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 4.6e-80 302.4 287 55.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 6.0e-80 302.0 275 56.4
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 3.0e-79 299.7 280 55.0
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 2.8e-77 293.1 255 56.5
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 4.0e-76 289.3 281 53.0
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.2e-75 287.7 259 57.1
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.5e-75 287.3 308 48.7
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.6e-64 250.8 184 65.8
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.7e-64 250.0 186 65.6
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 6.8e-60 235.3 391 32.2
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.5e-59 234.2 148 73.0
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 3.4e-59 233.0 184 61.4
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.0e-47 194.9 160 55.0
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.1e-36 156.8 158 53.2
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.3e-29 134.8 109 56.9
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.8e-29 132.9 174 46.0
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.4e-28 131.3 118 53.4
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 2.5e-25 120.6 86 67.4
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 8.2e-13 79.0 141 34.8
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 5.5e-09 66.2 45 60.0


User provided reference genes

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