Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 4.0e-50 201.1 98 100.0
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 5.0e-40 167.5 96 82.3
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.5e-40 167.2 93 84.9
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.2e-39 164.5 96 81.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 4.2e-39 164.5 95 80.0
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 7.2e-39 163.7 96 79.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 7.2e-39 163.7 96 79.2
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.6e-38 162.5 91 81.3
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.1e-38 162.2 91 82.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.6e-38 161.0 96 79.2
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 7.9e-38 160.2 96 77.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.0e-37 159.8 96 81.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.0e-37 159.8 90 83.3
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.4e-37 159.5 96 79.2
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.4e-37 159.5 95 82.1
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 90 83.3
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.8e-37 159.1 96 78.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 3.0e-37 158.3 95 78.9
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.0e-37 158.3 95 80.0
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 3.0e-37 158.3 94 80.9
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 3.9e-37 157.9 96 76.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 5.1e-37 157.5 89 84.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 6.7e-37 157.1 96 77.1
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 8.8e-37 156.8 97 76.3
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 75.5
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.1e-36 156.4 97 75.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.1e-36 156.4 94 80.9
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.5e-36 156.0 96 77.1
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.5e-36 156.0 96 77.1
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.5e-36 156.0 96 77.1
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 2.0e-36 155.6 92 80.4
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 2.0e-36 155.6 97 72.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.5e-36 155.2 90 82.2
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.5e-36 155.2 96 76.0
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.3e-36 154.5 92 78.3
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 4.3e-36 154.5 98 74.5
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.3e-36 154.5 91 81.3
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 7.4e-36 153.7 92 79.3
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 7.4e-36 153.7 91 80.2
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 7.4e-36 153.7 97 71.1
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 9.7e-36 153.3 90 80.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 9.7e-36 153.3 96 75.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 9.7e-36 153.3 95 73.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 9.7e-36 153.3 96 75.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.3e-35 152.9 96 76.0
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.2e-35 152.1 89 80.9
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.2e-35 152.1 89 80.9
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.2e-35 152.1 89 80.9
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.2e-35 152.1 96 77.1
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 3.7e-35 151.4 98 75.5
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 4.8e-35 151.0 92 76.1
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 6.3e-35 150.6 91 78.0
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 6.3e-35 150.6 90 80.0
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 73.7
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.1e-34 149.8 91 74.7
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 74.2
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 1.8e-34 149.1 123 63.4
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.8e-34 149.1 91 78.0
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.8e-34 149.1 94 76.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.4e-34 148.7 88 76.1
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 6.9e-34 147.1 96 71.9
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 6.9e-34 147.1 101 70.3
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 9.1e-34 146.7 95 71.6
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.2e-33 146.4 94 70.2
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.5e-33 146.0 91 72.5
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.0e-33 145.6 87 78.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.6e-33 145.2 90 72.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 95 72.6
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 7.7e-33 143.7 93 74.2
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 7.7e-33 143.7 87 78.2
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 7.7e-33 143.7 85 76.5
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 92 73.9
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.0e-32 143.3 93 72.0
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 87 78.2
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.2e-32 142.1 91 75.8
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.2e-32 142.1 96 71.9
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.8e-32 141.4 91 74.7
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 6.5e-32 140.6 91 73.6
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 6.5e-32 140.6 80 81.2
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 8.5e-32 140.2 91 73.6
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 8.5e-32 140.2 91 73.6
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 8.5e-32 140.2 91 73.6
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 8.5e-32 140.2 91 73.6
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.4e-31 139.4 91 72.5
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.4e-31 139.4 80 81.2
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 3.2e-31 138.3 91 70.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 4.2e-31 137.9 102 66.7
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.5e-31 137.5 88 79.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.6e-30 136.0 83 77.1
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.7e-30 135.2 81 75.3
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 4.7e-30 134.4 81 75.3
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 6.1e-30 134.0 80 80.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 6.1e-30 134.0 90 70.0
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 7.9e-30 133.7 97 64.9
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.0e-29 133.3 94 68.1
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.0e-29 133.3 94 68.1
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-29 132.9 94 68.1
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.8e-29 132.5 94 72.3
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.3e-29 132.1 94 68.1
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.3e-29 132.1 94 68.1
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-29 131.0 94 67.0
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 4.4e-28 127.9 72 80.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 7.4e-28 127.1 80 73.8
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 9.7e-28 126.7 84 70.2
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.8e-24 114.8 99 63.6
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 3.2e-23 111.7 77 74.0
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.1e-20 103.2 79 58.2
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 2.6e-20 102.1 72 66.7
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 7.4e-20 100.5 82 61.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.1e-18 96.7 83 53.0
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.8e-16 88.2 113 44.2
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 8.5e-16 87.0 79 57.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 9.4e-15 83.6 89 48.3
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 8.0e-14 80.5 46 78.3
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 7.5e-12 73.9 60 60.0
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 8.3e-11 70.5 74 48.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.7e-09 65.5 38 73.7
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 2.2e-08 62.4 40 75.0
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 9.4e-07 57.0 57 52.6


User provided reference genes

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