Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.4e-147 526.2 251 100.0
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 4.0e-86 322.0 289 59.5
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 8.1e-79 297.7 285 55.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.1e-78 295.8 238 60.9
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.4e-75 287.0 303 51.2
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.9e-75 286.6 303 51.2
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.9e-74 281.2 303 50.2
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 7.9e-74 281.2 287 51.2
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 7.9e-74 281.2 287 50.5
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 1.3e-73 280.4 287 51.2
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.3e-73 280.4 298 50.3
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 2.3e-73 279.6 292 52.1
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.0e-73 279.3 290 50.3
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 8.7e-73 277.7 287 51.6
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.1e-72 277.3 287 50.5
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.5e-72 276.2 290 49.7
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 3.3e-72 275.8 289 50.2
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 5.7e-72 275.0 291 52.2
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 7.4e-72 274.6 289 50.2
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.3e-71 273.9 311 48.9
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.4e-70 270.4 289 48.4
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.1e-70 268.9 289 48.8
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.1e-70 268.9 330 46.1
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 5.3e-70 268.5 291 49.5
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 5.3e-70 268.5 288 50.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 9.0e-70 267.7 289 49.1
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.0e-69 266.5 291 49.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 2.6e-69 266.2 296 48.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 2.6e-69 266.2 288 48.6
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 2.6e-69 266.2 289 49.1
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 5.8e-69 265.0 285 48.8
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 5.8e-69 265.0 289 49.8
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 7.6e-69 264.6 289 49.1
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.0e-68 264.2 206 63.6
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.0e-68 264.2 299 48.5
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.3e-68 263.8 290 48.3
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.3e-68 263.8 288 48.6
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.7e-68 263.5 296 47.3
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.7e-68 263.5 289 47.1
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.7e-68 263.5 288 49.3
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 2.2e-68 263.1 284 48.9
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.2e-68 263.1 289 47.8
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 2.9e-68 262.7 290 47.9
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 3.8e-68 262.3 206 65.0
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 3.8e-68 262.3 293 49.8
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 5.0e-68 261.9 288 49.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 5.0e-68 261.9 288 49.7
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 5.0e-68 261.9 289 48.8
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.5e-68 261.5 291 48.5
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 6.5e-68 261.5 295 49.5
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 8.4e-68 261.2 300 47.7
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.1e-67 260.8 247 57.9
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 1.4e-67 260.4 299 46.5
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.5e-67 259.6 288 49.0
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 3.2e-67 259.2 284 48.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 3.2e-67 259.2 292 46.2
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 4.2e-67 258.8 319 46.7
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 5.5e-67 258.5 292 47.6
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.2e-66 257.3 287 49.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.6e-66 256.9 285 49.1
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.6e-66 256.9 288 48.6
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 4.6e-66 255.4 290 48.6
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 1.0e-65 254.2 284 50.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.0e-65 254.2 291 46.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.8e-65 253.4 292 45.5
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.8e-65 253.4 286 47.6
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 3.0e-65 252.7 291 46.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 3.9e-65 252.3 289 46.7
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 6.7e-65 251.5 285 47.0
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 8.7e-65 251.1 285 47.0
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 2.5e-64 249.6 290 48.3
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 2.5e-64 249.6 207 59.9
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 4.3e-64 248.8 291 48.1
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 1.6e-63 246.9 296 46.3
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.6e-63 246.9 288 46.5
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 2.2e-63 246.5 285 46.3
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.8e-63 246.1 285 46.7
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 4.8e-63 245.4 315 45.1
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 6.3e-63 245.0 355 40.0
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.1e-62 244.2 285 46.3
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.1e-62 244.2 285 46.3
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.2e-61 240.7 286 44.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.5e-61 240.4 291 46.4
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 2.0e-61 240.0 284 46.1
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.6e-61 239.6 288 47.2
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 3.4e-61 239.2 280 45.4
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.0e-60 237.7 289 43.9
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 4.2e-59 232.3 288 45.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.7e-58 229.6 303 45.2
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 3.9e-57 225.7 288 46.2
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.7e-57 224.9 297 43.8
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 8.8e-57 224.6 206 55.3
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.2e-55 219.9 283 41.7
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.4e-54 216.5 289 42.6
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 4.5e-53 212.2 372 36.3
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 4.5e-53 212.2 279 44.4
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.4e-49 200.7 181 59.7
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 8.8e-49 198.0 283 39.9
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.3e-47 191.8 203 51.7
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 5.3e-46 188.7 164 53.0
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 5.9e-45 185.3 168 56.0
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 8.5e-44 181.4 202 48.0
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-43 179.9 275 39.6
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.5e-40 170.6 228 45.2
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.4e-38 163.3 345 32.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.5e-35 152.1 235 38.7
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 7.2e-35 151.8 149 49.7
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.2e-32 144.4 444 28.6
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.2e-29 134.4 97 62.9
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 3.6e-26 122.9 175 39.4
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 5.2e-25 119.0 203 36.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 3.1e-22 109.8 201 32.8
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.5e-19 100.9 92 53.3
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.4e-14 84.3 61 63.9
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 5.0e-12 75.9 68 51.5
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.0e-10 68.6 91 46.2
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 7.0e-06 55.5 51 51.0


User provided reference genes

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