Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04856 Selenicereus undatus HOM05D006590 ORTHO05D008427 7.6e-95 350.5 181 100.0
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 1.2e-52 210.3 190 65.3
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 3.0e-51 205.7 182 61.0
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 3.7e-49 198.7 182 58.8
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 1.6e-44 183.3 192 56.2
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 3.5e-39 165.6 183 51.4
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 1.3e-38 163.7 189 53.4
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 1.7e-38 163.3 185 52.4
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 1.7e-38 163.3 192 52.1
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 5.0e-38 161.8 190 53.2
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 4.3e-37 158.7 192 52.6
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 5.6e-37 158.3 185 49.7
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 9.5e-37 157.5 189 50.8
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 9.5e-37 157.5 189 51.9
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 1.2e-36 157.1 185 51.4
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 1.6e-36 156.8 193 52.3
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 2.1e-36 156.4 189 54.0
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 4.7e-36 155.2 183 51.4
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 4.7e-36 155.2 191 51.3
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 4.7e-36 155.2 189 49.2
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 6.1e-36 154.8 189 49.2
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 1.4e-35 153.7 189 49.7
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 2.3e-35 152.9 190 48.4
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 2.3e-35 152.9 186 49.5
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 4.0e-35 152.1 190 51.1
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 4.0e-35 152.1 196 49.0
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 5.2e-35 151.8 189 49.7
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 6.8e-35 151.4 185 50.3
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 6.8e-35 151.4 185 50.3
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 8.9e-35 151.0 190 50.5
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 8.9e-35 151.0 192 50.0
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 2.6e-34 149.4 187 49.7
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 3.4e-34 149.1 161 56.5
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 3.4e-34 149.1 191 50.8
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 4.4e-34 148.7 187 50.8
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 7.5e-34 147.9 192 49.5
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 7.5e-34 147.9 192 49.5
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 9.8e-34 147.5 161 55.9
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 9.8e-34 147.5 185 49.7
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 1.3e-33 147.1 186 49.5
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 1.3e-33 147.1 189 49.2
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 1.3e-33 147.1 193 49.2
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 1.7e-33 146.7 185 50.3
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 1.7e-33 146.7 185 50.3
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 1.7e-33 146.7 188 46.3
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 2.2e-33 146.4 184 49.5
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 2.9e-33 146.0 184 49.5
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 2.9e-33 146.0 166 53.0
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 4.9e-33 145.2 191 48.2
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 4.9e-33 145.2 193 47.7
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 8.3e-33 144.4 184 48.4
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 8.3e-33 144.4 193 47.7
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 8.3e-33 144.4 193 49.7
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 1.4e-32 143.7 194 48.5
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.9e-32 143.3 185 49.2
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 2.4e-32 142.9 186 46.8
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 3.2e-32 142.5 193 47.2
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 3.2e-32 142.5 189 45.5
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 5.4e-32 141.7 191 48.2
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 9.2e-32 141.0 181 46.4
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 1.2e-31 140.6 161 54.0
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 1.2e-31 140.6 140 56.4
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 1.2e-31 140.6 193 46.1
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.6e-31 140.2 185 48.6
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 2.0e-31 139.8 186 45.7
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 2.0e-31 139.8 136 55.1
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 3.5e-31 139.0 182 48.9
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 3.5e-31 139.0 167 49.1
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 4.6e-31 138.7 188 47.3
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 7.8e-31 137.9 191 47.6
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 7.8e-31 137.9 185 49.2
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 1.0e-30 137.5 167 52.7
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 1.7e-30 136.7 151 53.0
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 1.7e-30 136.7 140 53.6
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 1.7e-30 136.7 190 46.8
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 2.3e-30 136.3 150 52.7
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 2.3e-30 136.3 147 53.1
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 3.0e-30 136.0 149 54.4
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 3.0e-30 136.0 194 44.3
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 5.0e-30 135.2 144 54.2
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 8.6e-30 134.4 184 48.4
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.5e-29 133.7 138 52.9
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 1.5e-29 133.7 100 63.0
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 1.9e-29 133.3 199 45.7
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 7.3e-29 131.3 100 68.0
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 9.5e-29 131.0 174 47.1
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 9.5e-29 131.0 106 65.1
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 2.8e-28 129.4 200 42.5
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 3.6e-28 129.0 147 50.3
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 3.6e-28 129.0 106 65.1
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 6.2e-28 128.3 93 69.9
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 8.0e-28 127.9 131 51.9
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 1.4e-27 127.1 95 67.4
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 8.9e-27 124.4 100 66.0
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 2.0e-26 123.2 102 59.8
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 2.6e-26 122.9 100 59.0
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.6e-26 122.9 96 66.7
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 1.7e-25 120.2 95 64.2
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 2.7e-23 112.8 142 46.5
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 1.8e-19 100.1 101 54.5
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 2.3e-19 99.8 110 49.1
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 3.4e-18 95.9 161 43.5
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 3.7e-17 92.4 185 37.3
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 2.7e-15 86.3 87 49.4
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 1.7e-09 67.0 125 37.6
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 3.2e-08 62.8 174 32.2
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 6.0e-07 58.5 118 37.3
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.9e-06 55.8 47 59.6


User provided reference genes

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