Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.3e-73 279.6 140 100.0
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.7e-55 218.8 140 77.1
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 6.6e-54 214.2 140 75.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 6.6e-54 214.2 140 75.0
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 2.1e-52 209.1 143 69.9
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.4e-51 206.5 140 72.1
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.8e-51 206.1 146 67.8
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.0e-51 204.9 140 71.4
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.9e-51 203.8 150 66.7
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 8.9e-51 203.8 150 70.7
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.2e-50 203.4 140 70.7
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.0e-50 202.6 150 66.7
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.0e-50 202.6 150 66.7
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 5.8e-50 201.1 149 66.4
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 5.8e-50 201.1 140 68.6
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.7e-49 199.5 147 68.7
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 6.4e-49 197.6 150 68.0
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.4e-49 197.2 144 68.1
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 8.4e-49 197.2 150 66.7
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.1e-48 196.8 150 66.7
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.4e-48 196.4 150 66.7
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 1.4e-48 196.4 141 67.4
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 1.4e-48 196.4 140 70.0
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 3.2e-48 195.3 143 66.4
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 3.2e-48 195.3 150 66.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 4.1e-48 194.9 140 68.6
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 7.1e-48 194.1 141 67.4
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.2e-47 193.4 140 67.9
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.2e-47 193.4 139 69.1
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.6e-47 193.0 144 69.4
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 6.0e-47 191.0 140 67.9
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 6.0e-47 191.0 140 67.1
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.0e-46 190.3 162 61.1
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.1e-46 188.0 142 65.5
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 5.1e-46 188.0 148 62.2
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 6.6e-46 187.6 143 67.1
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 1.9e-45 186.0 155 62.6
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.9e-45 186.0 151 63.6
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 1.9e-45 186.0 140 64.3
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 1.9e-45 186.0 141 66.7
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 2.5e-45 185.7 150 64.7
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 2.5e-45 185.7 144 64.6
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 3.3e-45 185.3 140 64.3
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 3.3e-45 185.3 146 63.7
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 3.3e-45 185.3 140 65.7
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 3.3e-45 185.3 140 65.7
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.6e-45 184.5 150 64.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 5.6e-45 184.5 140 65.7
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 9.6e-45 183.7 140 62.9
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 9.6e-45 183.7 150 64.0
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 9.6e-45 183.7 140 65.7
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.2e-44 183.3 150 64.0
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.2e-44 183.3 150 64.0
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.2e-44 183.3 150 64.0
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 1.2e-44 183.3 140 62.9
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.1e-44 182.6 150 63.3
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 2.8e-44 182.2 147 62.6
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-44 182.2 150 63.3
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 2.8e-44 182.2 140 63.6
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.6e-44 181.8 151 64.2
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 4.7e-44 181.4 149 63.8
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 4.7e-44 181.4 149 63.1
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 6.2e-44 181.0 150 60.0
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 6.2e-44 181.0 142 63.4
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.8e-43 179.5 145 64.8
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.8e-43 179.5 140 64.3
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 4.0e-43 178.3 140 63.6
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 4.0e-43 178.3 163 57.1
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 5.2e-43 177.9 153 56.9
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 8.9e-43 177.2 142 62.0
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 1.2e-42 176.8 150 60.0
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.2e-42 176.8 146 61.0
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.5e-42 176.4 153 56.2
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.0e-42 176.0 146 62.3
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.4e-42 175.3 163 55.8
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 7.6e-42 174.1 149 59.1
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 7.6e-42 174.1 149 61.1
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 9.9e-42 173.7 150 62.7
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 9.9e-42 173.7 163 58.3
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 9.9e-42 173.7 141 63.1
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 1.3e-41 173.3 140 62.1
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.3e-41 173.3 158 59.5
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 2.2e-41 172.6 139 64.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 2.2e-41 172.6 163 58.3
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 2.2e-41 172.6 140 63.6
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 3.8e-41 171.8 140 62.1
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 3.8e-41 171.8 150 62.0
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 4.9e-41 171.4 141 62.4
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 4.9e-41 171.4 128 64.8
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 4.9e-41 171.4 146 58.9
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 8.4e-41 170.6 140 62.9
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 1.1e-40 170.2 149 59.7
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.4e-40 169.1 157 57.3
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 2.4e-40 169.1 140 60.0
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 3.2e-40 168.7 140 59.3
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 3.2e-40 168.7 140 59.3
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 3.2e-40 168.7 140 59.3
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 4.2e-40 168.3 140 59.3
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 7.1e-40 167.5 140 58.6
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 9.3e-40 167.2 140 60.7
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.6e-39 166.4 140 57.9
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.1e-39 166.0 151 59.6
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 3.5e-39 165.2 149 56.4
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.0e-38 163.7 140 58.6
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.3e-38 163.3 140 58.6
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 3.0e-38 162.2 142 56.3
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 3.9e-38 161.8 147 55.1
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 3.9e-38 161.8 140 57.1
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 5.1e-38 161.4 141 57.4
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 5.1e-38 161.4 141 57.4
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 5.1e-38 161.4 150 54.0
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 6.6e-38 161.0 152 57.2
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 8.7e-38 160.6 147 54.4
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 8.7e-38 160.6 151 57.6
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.5e-37 159.1 143 55.9
vmacro06667 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 7.3e-37 157.5 129 59.7
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 9.6e-37 157.1 140 55.7
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 4.0e-35 151.8 144 55.6
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 5.3e-35 151.4 132 62.1
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 6.9e-35 151.0 91 71.4
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 9.0e-35 150.6 168 47.6
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.0e-34 149.4 109 63.3
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.9e-33 145.6 140 52.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 1.1e-32 143.7 126 56.3
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 2.1e-31 139.4 157 47.1
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.5e-31 138.7 115 58.3
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.0e-30 135.6 180 44.4
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 3.0e-30 135.6 140 51.4
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 3.9e-30 135.2 115 55.7
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 7.4e-29 131.0 118 55.1
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 9.6e-29 130.6 133 55.6
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 1.1e-27 127.1 94 59.6
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 1.5e-26 123.2 88 76.1
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 2.0e-26 122.9 140 45.0
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 9.9e-26 120.6 208 38.5
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 9.9e-26 120.6 143 48.3
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 2.2e-17 92.8 60 61.7
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.0e-14 84.0 102 48.0
MELO3C034501.2 Cucumis melo HOM05D001607 ORTHO05D001893 2.3e-14 82.8 58 62.1
PGSC0003DMG400019983 Solanum tuberosum HOM05D001607 ORTHO05D000214 7.6e-10 67.8 49 59.2
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 2.5e-08 62.8 132 31.1
SHI13772 Sapria himalayana HOM05D001607 ORTHO05D001893 6.1e-07 58.2 86 43.0


User provided reference genes

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