Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 0.0e+00 1176.4 596 100.0
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 3.6e-226 788.5 688 63.2
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 1.1e-206 723.8 668 60.2
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 7.8e-205 717.6 668 60.3
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 7.8e-205 717.6 667 60.0
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 7.3e-203 711.1 652 60.4
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 3.1e-201 705.7 664 59.0
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 2.2e-199 699.5 607 61.3
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 2.1e-197 693.0 660 57.7
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 4.6e-197 691.8 659 58.3
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 4.6e-197 691.8 656 58.1
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.0e-196 690.6 662 57.4
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 3.0e-196 689.1 667 57.0
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 6.6e-196 688.0 640 59.1
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 1.1e-195 687.2 663 57.8
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 5.6e-195 684.9 687 56.2
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 1.8e-193 679.9 662 57.7
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 6.9e-193 677.9 664 55.4
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 3.4e-192 675.6 649 56.9
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 1.3e-191 673.7 705 53.6
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 1.7e-191 673.3 630 59.4
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.2e-191 672.9 653 56.2
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.9e-191 672.5 660 57.0
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 1.4e-190 670.2 660 56.7
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.9e-190 669.8 660 56.7
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.0e-188 664.1 741 52.5
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 1.5e-187 660.2 655 56.5
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 3.3e-187 659.1 668 56.0
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 1.5e-184 650.2 652 54.4
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 3.4e-184 649.0 665 55.2
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 4.9e-183 645.2 651 56.1
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 1.6e-181 640.2 637 54.9
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.8e-180 636.7 601 60.2
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.8e-180 636.7 654 55.4
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 3.0e-180 636.0 662 53.5
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 3.9e-180 635.6 674 54.0
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 1.1e-179 634.0 651 54.2
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-179 633.6 625 57.8
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.9e-179 633.3 625 57.6
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 2.1e-178 629.8 624 54.3
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 3.7e-178 629.0 763 50.3
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 3.7e-178 629.0 648 54.8
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 6.2e-178 628.2 619 57.2
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 5.8e-176 621.7 672 50.7
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.7e-175 620.2 648 50.9
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.4e-174 617.1 530 62.5
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.2e-174 615.9 523 63.7
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 5.1e-172 608.6 651 53.5
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 5.7e-171 605.1 642 54.4
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 5.7e-171 605.1 616 54.4
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.4e-164 583.9 651 53.1
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 4.8e-162 575.5 690 49.4
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 3.1e-161 572.8 615 51.7
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 3.3e-155 552.7 532 57.3
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 6.3e-154 548.5 513 56.3
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 7.2e-150 535.0 508 58.9
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 8.0e-149 531.6 550 54.2
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.3e-146 524.2 560 53.4
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 3.8e-143 512.7 467 62.1
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 1.2e-139 501.1 662 42.9
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 5.3e-137 492.3 477 59.5
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 5.3e-137 492.3 665 46.5
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 9.1e-137 491.5 459 60.1
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.9e-134 483.8 459 59.7
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 8.0e-133 478.4 549 50.6
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 4.5e-128 462.6 448 55.6
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 2.5e-126 456.8 484 55.0
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 1.7e-119 434.1 364 63.7
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 5.8e-115 419.1 480 52.5
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 9.8e-115 418.3 468 52.4
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.3e-114 417.9 584 40.8
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 9.2e-113 411.8 493 50.3
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 4.6e-112 409.5 462 53.0
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 7.8e-112 408.7 343 63.3
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 9.5e-110 401.7 653 38.4
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 3.1e-108 396.7 561 44.9
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 2.6e-107 393.7 469 49.0
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 5.8e-107 392.5 331 62.2
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 9.5e-102 375.2 456 50.7
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 2.0e-91 340.9 641 35.3
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 3.8e-90 336.7 340 55.6
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 1.1e-73 282.0 169 80.5
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 2.7e-72 277.3 168 76.2
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 1.5e-70 271.6 169 75.7
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 4.3e-70 270.0 255 59.6
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 7.4e-70 269.2 169 75.1
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 1.4e-68 265.0 244 57.8
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.0e-66 258.8 280 55.7
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 1.4e-65 255.0 333 45.0
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 3.5e-64 250.4 155 78.7
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 3.0e-63 247.3 257 51.8
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 2.5e-62 244.2 168 67.3
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 2.5e-62 244.2 174 65.5
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 9.6e-62 242.3 174 64.4
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.6e-61 241.5 173 68.2
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 2.1e-61 241.1 172 68.0
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 2.8e-61 240.7 174 63.2
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 5.0e-58 229.9 349 42.7
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 1.2e-56 225.3 132 82.6
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 1.6e-56 224.9 132 82.6
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 4.6e-56 223.4 168 61.3
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 5.7e-54 216.5 184 57.6
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 6.9e-52 209.5 532 32.1
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 3.7e-45 187.2 178 56.2
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.4e-44 185.3 115 74.8
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.4e-44 185.3 168 54.8
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 1.2e-43 182.2 177 52.5
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 1.5e-43 181.8 129 69.0
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 2.2e-42 177.9 130 63.1
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 8.5e-34 149.4 90 75.6
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 1.5e-33 148.7 114 70.2
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.7e-29 135.2 185 41.6
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.8e-29 134.4 168 48.2
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 3.7e-29 134.0 136 47.8
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 8.5e-26 122.9 80 75.0
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 7.2e-25 119.8 77 76.6
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.0e-23 114.4 68 82.4
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 5.2e-23 113.6 168 36.3
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 4.4e-22 110.5 68 75.0
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 3.1e-20 104.4 81 58.0
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 4.1e-20 104.0 70 71.4
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 4.1e-20 104.0 190 43.7
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 2.3e-15 88.2 43 95.3
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 2.3e-15 88.2 43 95.3
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 8.8e-15 86.3 58 63.8
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 9.8e-14 82.8 56 66.1
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 1.7e-13 82.0 131 42.0
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 5.9e-11 73.6 87 47.1
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 5.0e-10 70.5 87 44.8
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 6.6e-10 70.1 87 44.8
Sp1g03340 Schrenkiella parvula HOM05D003335 ORTHO05D003853 3.3e-09 67.8 287 26.1
Carub.0001s0372 Capsella rubella HOM05D003335 ORTHO05D003853 2.8e-08 64.7 285 26.0
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 3.6e-08 64.3 43 65.1
A10p02930 Brassica napus HOM05D003335 ORTHO05D003853 4.7e-08 63.9 284 26.1
C05p02680 Brassica napus HOM05D003335 ORTHO05D003853 4.7e-08 63.9 284 26.1
BolC5t29049H Brassica oleracea HOM05D003335 ORTHO05D003853 4.7e-08 63.9 284 26.1
BraA10t42562Z Brassica rapa HOM05D003335 ORTHO05D003853 4.7e-08 63.9 284 26.1
BcaC07g36904 Brassica carinata HOM05D003335 ORTHO05D003853 6.1e-08 63.5 289 25.3
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 8.0e-08 63.2 284 25.7
arahy.Tifrunner.gnm1.ann1.0Y6UED Arachis hypogaea HOM05D003335 ORTHO05D003853 1.4e-07 62.4 280 23.9
arahy.Tifrunner.gnm1.ann1.3R4EAX Arachis hypogaea HOM05D003335 ORTHO05D003853 1.4e-07 62.4 280 23.9
Dinv29806 Davidia involucrata HOM05D003335 ORTHO05D003853 1.8e-07 62.0 280 26.1
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 2.3e-07 61.6 49 46.9
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 3.0e-07 61.2 57 52.6
PRCOL_00007011 Prasinoderma coloniale HOM05D004669 ORTHO05D000387 4.0e-07 60.8 244 24.6
THA.LOC104816006 Tarenaya hassleriana HOM05D003335 ORTHO05D003853 6.8e-07 60.1 284 23.2
CiPaw.02G107400 Carya illinoinensis HOM05D003335 ORTHO05D003853 8.9e-07 59.7 280 25.0


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