Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04783 Selenicereus undatus HOM05D005947 ORTHO05D007498 4.1e-47 191.0 97 100.0
AUR62031418 Chenopodium quinoa HOM05D005947 ORTHO05D007498 1.0e-45 186.4 97 95.9
AUR62021126 Chenopodium quinoa HOM05D005947 ORTHO05D007498 2.3e-45 185.3 97 94.8
MELO3C005838.2 Cucumis melo HOM05D005947 ORTHO05D007498 2.3e-45 185.3 97 94.8
CsaV3_5G001080 Cucumis sativus L. HOM05D005947 ORTHO05D007498 2.3e-45 185.3 97 94.8
Cfa016284 Carpinus fangiana HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Haze_00040 Corylus avellana HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Duzib084G0036 Durio zibethinus HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Gohir.A08G098000 Gossypium hirsutum HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Gohir.D08G109600 Gossypium hirsutum HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Gorai.004G117300 Gossypium raimondii HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Hma1.2p1_0274F.1_g110170 Hydrangea macrophylla HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
PGR042G2417 Punica granatum HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Sed0027671 Sechium edule HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 93.8
THA.LOC104798913 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
TWI39G0764 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 5.1e-45 184.1 97 94.8
Cpa.g.sc107.105 Carica papaya HOM05D005947 ORTHO05D007498 8.6e-45 183.3 97 94.8
CANSAT21G1923 Cannabis sativa HOM05D005947 ORTHO05D007498 1.1e-44 183.0 97 93.8
Potri.004G080100 Populus trichocarpa HOM05D005947 ORTHO05D007498 1.1e-44 183.0 95 95.8
Sabra04G0053200 Salix brachista HOM05D005947 ORTHO05D007498 1.1e-44 183.0 95 95.8
THA.LOC104814930 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 1.1e-44 183.0 97 93.8
Thecc.03G183900 Theobroma cacao HOM05D005947 ORTHO05D007498 1.1e-44 183.0 97 93.8
TWI14G0750 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 1.1e-44 183.0 97 93.8
Aqoxy7G00241 Aquilegia oxysepala HOM05D005947 ORTHO05D007498 1.9e-44 182.2 97 93.8
Ciclev10005457m.g Citrus clementina HOM05D005947 ORTHO05D007498 1.9e-44 182.2 97 91.8
Cc02_g02400 Coffea canephora HOM05D005947 ORTHO05D007498 1.9e-44 182.2 97 93.8
MD07G1278700 Malus domestica HOM05D005947 ORTHO05D007498 1.9e-44 182.2 97 92.8
Ah.07g206580 Amaranthus hybridus HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 92.8
PSO478G4027 Papaver somniferum HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 92.8
PSO782G1988 Papaver somniferum HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 92.8
QL09p012952 Quercus lobata HOM05D005947 ORTHO05D007498 2.5e-44 181.8 96 93.8
Rhsim09G0200500 Rhododendron simsii HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 92.8
SalBow4G2978 Salvia bowleyana HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 93.8
Sed0018068 Sechium edule HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 93.8
vmacro09816 Vaccinium macrocarpon HOM05D005947 ORTHO05D007498 2.5e-44 181.8 97 93.8
AL6G35340 Arabidopsis lyrata HOM05D005947 ORTHO05D007498 3.3e-44 181.4 97 92.8
AT5G24020 Arabidopsis thaliana HOM05D005947 ORTHO05D007498 3.3e-44 181.4 97 92.8
CiPaw.05G262900 Carya illinoinensis HOM05D005947 ORTHO05D007498 3.3e-44 181.4 95 94.7
DCAR_010659 Daucus carota HOM05D005947 ORTHO05D007498 3.3e-44 181.4 97 92.8
Sp2g23290 Schrenkiella parvula HOM05D005947 ORTHO05D007498 3.3e-44 181.4 97 92.8
Migut.F00295 Erythranthe guttata HOM05D005947 ORTHO05D007498 4.3e-44 181.0 97 93.8
Eucgr.A02743 Eucalyptus grandis HOM05D005947 ORTHO05D007498 4.3e-44 181.0 97 92.8
CARHR189560 Cardamine hirsuta HOM05D005947 ORTHO05D007498 7.3e-44 180.3 97 91.8
Sc19g0001250 Simmondsia chinensis HOM05D005947 ORTHO05D007498 7.3e-44 180.3 97 91.8
Atru.chr1.362 Acer truncatum HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN01G2305 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN03G2555 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN03G2880 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN06G1268 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN10G0541 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
FAN10G2124 Fragaria x ananassa HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
Nn6g33304 Nelumbo nucifera HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 91.8
RcHm_v2.0_Chr1g0378251 Rosa chinensis HOM05D005947 ORTHO05D007498 9.6e-44 179.9 97 90.7
Aa31LG11G3310 Aethionema arabicum HOM05D005947 ORTHO05D007498 1.6e-43 179.1 97 90.7
ECA232G3749 Erigeron canadensis HOM05D005947 ORTHO05D007498 1.6e-43 179.1 97 90.7
Lsat_1_v5_gn_9_56500 Lactuca sativa HOM05D005947 ORTHO05D007498 1.6e-43 179.1 97 90.7
Oeu034005.1 Olea europaea HOM05D005947 ORTHO05D007498 1.6e-43 179.1 97 92.8
Peaxi162Scf00444g00012 Petunia axillaris HOM05D005947 ORTHO05D007498 1.6e-43 179.1 95 93.7
TAR375G0765 Trochodendron aralioides HOM05D005947 ORTHO05D007498 1.6e-43 179.1 97 91.8
BcaNung01201 Brassica carinata HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
BcaNung01829 Brassica carinata HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
A06p34800 Brassica napus HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
C07p43700 Brassica napus HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
BolC7t44900H Brassica oleracea HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
BraA06t26407Z Brassica rapa HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
Carub.0006s2174 Capsella rubella HOM05D005947 ORTHO05D007498 2.1e-43 178.7 97 90.7
Dinv28389 Davidia involucrata HOM05D005947 ORTHO05D007498 2.1e-43 178.7 95 92.6
Thhalv10005713m.g Eutrema salsugineum HOM05D005947 ORTHO05D007498 2.1e-43 178.7 95 92.6
BcaB04g19841 Brassica carinata HOM05D005947 ORTHO05D007498 2.8e-43 178.3 97 89.7
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 2.8e-43 178.3 95 92.6
FAN06G0215 Fragaria x ananassa HOM05D005947 ORTHO05D007498 2.8e-43 178.3 97 90.7
MSTRG.27089 Avicennia marina HOM05D005947 ORTHO05D007498 3.6e-43 177.9 97 91.8
MSTRG.8712 Avicennia marina HOM05D005947 ORTHO05D007498 3.6e-43 177.9 97 90.7
Lj1P1004T65 Lonicera japonica HOM05D005947 ORTHO05D007498 3.6e-43 177.9 97 90.7
Manes.14G022800 Manihot esculenta HOM05D005947 ORTHO05D007498 3.6e-43 177.9 95 92.6
Aa31sc89G80 Aethionema arabicum HOM05D000041 ORTHO05D000061 4.7e-43 177.6 97 89.7
Dinv35250 Davidia involucrata HOM05D005947 ORTHO05D007498 4.7e-43 177.6 95 91.6
FvH4_7g30210 Fragaria vesca HOM05D005947 ORTHO05D007498 4.7e-43 177.6 97 89.7
TAR374G0782 Trochodendron aralioides HOM05D005947 ORTHO05D007498 4.7e-43 177.6 97 90.7
Nitab4.5_0000084g0430 Nicotiana tabacum HOM05D005947 ORTHO05D007498 1.1e-42 176.4 95 91.6
Nitab4.5_0008851g0010 Nicotiana tabacum HOM05D005947 ORTHO05D007498 1.1e-42 176.4 95 91.6
Duzib205G0732 Durio zibethinus HOM05D005947 ORTHO05D007498 1.4e-42 176.0 97 93.8
MBI11_g04748_MAGBIO Magnolia biondii HOM05D005947 ORTHO05D007498 1.4e-42 176.0 97 89.7
unitig_37.g11971 Utricularia gibba HOM05D005947 ORTHO05D007498 1.4e-42 176.0 97 89.7
Ca_20085_v3 Cicer arietinum L. HOM05D005947 ORTHO05D007498 1.8e-42 175.6 97 92.8
Medtr6g048300 Medicago truncatula HOM05D005947 ORTHO05D007498 1.8e-42 175.6 97 92.8
TPR.G33515 Trifolium pratense HOM05D005947 ORTHO05D007498 1.8e-42 175.6 97 92.8
Solyc03g007980.1 Solanum lycopersicum HOM05D005947 ORTHO05D007498 2.4e-42 175.3 95 91.6
Sopen03g003920 Solanum pennellii HOM05D005947 ORTHO05D007498 2.4e-42 175.3 95 91.6
PGSC0003DMG400010127 Solanum tuberosum HOM05D005947 ORTHO05D007498 2.4e-42 175.3 95 91.6
Phvul.004G106800 Phaseolus vulgaris HOM05D005947 ORTHO05D007498 3.1e-42 174.9 97 91.8
Prupe.2G300600 Prunus persica HOM05D005947 ORTHO05D007498 3.1e-42 174.9 96 91.7
VMungo0464G0961 Vigna mungo HOM05D005947 ORTHO05D007498 4.0e-42 174.5 96 91.7
ClCG01G000930 Citrullus lanatus HOM05D005947 ORTHO05D007498 5.2e-42 174.1 91 94.5
Glyma.09G132300 Glycine max HOM05D005947 ORTHO05D007498 5.2e-42 174.1 97 91.8
Lalb_Chr01g0009481 Lupinus albus HOM05D005947 ORTHO05D007498 5.2e-42 174.1 97 92.8
Psat0ss1860g0200 Pisum sativum HOM05D005947 ORTHO05D007498 5.2e-42 174.1 97 91.8
CAN.G236.6 Capsicum annuum HOM05D005947 ORTHO05D007498 6.9e-42 173.7 95 90.5
Glyma.16G179200 Glycine max HOM05D005947 ORTHO05D007498 6.9e-42 173.7 97 91.8
Lalb_Chr03g0034831 Lupinus albus HOM05D005947 ORTHO05D007498 9.0e-42 173.3 97 90.7
Lj2g0014936 Lotus japonicus HOM05D005947 ORTHO05D007498 2.6e-41 171.8 97 89.7
CDE11G0334 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 3.4e-41 171.4 93 91.4
Nn1g01628 Nelumbo nucifera HOM05D005947 ORTHO05D007498 4.4e-41 171.0 95 87.4
arahy.Tifrunner.gnm1.ann1.D9DNDH Arachis hypogaea HOM05D005947 ORTHO05D007498 7.6e-41 170.2 95 90.5
COL.COLO4_10059 Corchorus olitorius HOM05D005947 ORTHO05D007498 7.6e-41 170.2 100 87.0
SEGI_04763 Sequoiadendron giganteum HOM05D005947 ORTHO05D007498 4.9e-40 167.5 98 84.7
ATR0661G312 Amborella trichopoda HOM05D005947 ORTHO05D007498 3.2e-39 164.9 98 82.7
CSS0033085 Camellia sinensis var. sinensis HOM05D005947 ORTHO05D007498 4.2e-39 164.5 88 92.0
Mapoly0042s0122 Marchantia polymorpha HOM05D005947 ORTHO05D007498 4.2e-39 164.5 97 84.5
SMO364G0223 Selaginella moellendorffii HOM05D005947 ORTHO05D007498 2.7e-38 161.8 97 83.5
arahy.Tifrunner.gnm1.ann1.4MV0VI Arachis hypogaea HOM05D005947 ORTHO05D007498 6.0e-38 160.6 87 90.8
AagrBONN_evm.TU.Sc2ySwM_368.3402 Anthoceros agrestis HOM05D005947 ORTHO05D007498 7.8e-38 160.2 98 82.7
Pp3c1_24820 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.7e-37 159.1 96 80.2
Pp3c2_15820 Physcomitrium patens HOM05D005947 ORTHO05D007498 2.3e-37 158.7 96 79.2
Os06g0106000 Oryza sativa ssp. japonica HOM05D005947 ORTHO05D007498 1.6e-35 152.5 100 78.0
SGA_v2.0_scaffold60G21105 Striga asiatica HOM05D005947 ORTHO05D007498 2.8e-35 151.8 82 92.7
Actinidia31839 Actinidia chinensis HOM05D005947 ORTHO05D007498 3.1e-34 148.3 78 96.2
Zm00001eb268640 Zea mays HOM05D005947 ORTHO05D007498 8.4e-32 140.2 84 81.0
C06p34040 Brassica napus HOM05D005947 ORTHO05D007498 6.0e-22 107.5 63 81.0
MCO05G507 Micromonas commoda HOM05D005947 ORTHO05D007498 6.7e-21 104.0 88 68.2
Cre12.g522950 Chlamydomonas reinhardtii HOM05D005947 ORTHO05D007498 2.4e-18 95.5 95 54.7
Pp3c14_14070 Physcomitrium patens HOM05D005947 ORTHO05D007498 3.6e-06 55.1 58 56.9


User provided reference genes

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