Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04730 Selenicereus undatus HOM05D025484 ORTHO05D003332 2.1e-183 645.6 333 100.0
AUR62016000 Chenopodium quinoa HOM05D025484 ORTHO05D003332 6.0e-61 238.8 326 46.0
AUR62021206 Chenopodium quinoa HOM05D025484 ORTHO05D017259 1.6e-50 204.1 295 44.7
Ah.07g207320 Amaranthus hybridus HOM05D025484 ORTHO05D017259 1.2e-42 177.9 314 41.7
Sc13g0008550 Simmondsia chinensis HOM05D025484 ORTHO05D003332 8.7e-28 128.6 458 31.2
TAR629G1002 Trochodendron aralioides HOM05D003520 ORTHO05D003332 1.0e-12 78.6 345 24.6
GSVIVG01019812001 Vitis vinifera HOM05D000016 ORTHO05D000109 1.8e-12 77.8 370 26.5
Dinv28454 Davidia involucrata HOM05D003520 ORTHO05D003332 1.5e-11 74.7 353 25.2
Aqoxy7G00385 Aquilegia oxysepala HOM05D003520 ORTHO05D003332 8.2e-10 68.9 388 24.2
Atru.chr1.477_Atru.chr1.478 Acer truncatum HOM05D003520 ORTHO05D003332 4.1e-09 66.6 336 25.3
CSS0014139 Camellia sinensis var. sinensis HOM05D003520 ORTHO05D003332 4.1e-09 66.6 343 28.9
TAR375G0279 Trochodendron aralioides HOM05D003520 ORTHO05D003332 4.1e-09 66.6 382 23.0
Dinv37667 Davidia involucrata HOM05D003520 ORTHO05D003332 6.9e-09 65.9 405 23.0
HanXRQChr09g0253501 Helianthus annuus HOM05D003520 ORTHO05D003332 1.0e-07 62.0 65 50.8
Actinidia32870 Actinidia chinensis HOM05D003520 ORTHO05D003332 2.2e-07 60.8 324 25.0
CiPaw.04G065400 Carya illinoinensis HOM05D003520 ORTHO05D003332 2.2e-07 60.8 59 50.8
Cc02_g03140 Coffea canephora HOM05D003520 ORTHO05D003332 2.2e-07 60.8 336 25.6
Lsat_1_v5_gn_0_29760 Lactuca sativa HOM05D003520 ORTHO05D003332 2.9e-07 60.5 357 25.2
Eucgr.K00243 Eucalyptus grandis HOM05D003520 ORTHO05D003332 5.0e-07 59.7 90 38.9
CiPaw.04G065200 Carya illinoinensis HOM05D003520 ORTHO05D003332 6.5e-07 59.3 95 38.9
MBI18_g01149_MAGBIO Magnolia biondii HOM05D003520 ORTHO05D003332 8.4e-07 58.9 373 23.9
Nitab4.5_0003604g0010 Nicotiana tabacum HOM05D003520 ORTHO05D003332 1.9e-06 57.8 219 30.1
Ciclev10004647m.g Citrus clementina HOM05D003520 ORTHO05D003332 4.2e-06 56.6 366 25.4
Cfa008307 Carpinus fangiana HOM05D003520 ORTHO05D003332 9.3e-06 55.5 212 26.9
CiPaw.11G138700 Carya illinoinensis HOM05D003520 ORTHO05D003332 9.3e-06 55.5 395 23.5
FAN04G1936 Fragaria x ananassa HOM05D003520 ORTHO05D003332 9.3e-06 55.5 64 45.3
QL12p017888 Quercus lobata HOM05D003520 ORTHO05D003332 9.3e-06 55.5 107 32.7


User provided reference genes

Program Settings