Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04601 Selenicereus undatus HOM05D005186 ORTHO05D006278 4.0e-204 714.5 364 100.0
Hund11823 Selenicereus undatus HOM05D005186 ORTHO05D006278 2.2e-85 320.1 418 54.3
EL10Ac3g05838 Beta vulgaris HOM05D005186 ORTHO05D006278 2.0e-73 280.4 397 50.9
Sc13g0007880 Simmondsia chinensis HOM05D005186 ORTHO05D006278 2.0e-73 280.4 373 53.6
Ah.07g207900 Amaranthus hybridus HOM05D005186 ORTHO05D006278 1.5e-70 270.8 398 51.0
Ciclev10005111m.g Citrus clementina HOM05D005186 ORTHO05D006278 1.7e-64 250.8 399 46.1
Atru.chr1.716 Acer truncatum HOM05D005186 ORTHO05D006278 2.8e-64 250.0 391 45.0
CAN.G48.15 Capsicum annuum HOM05D005186 ORTHO05D006278 3.1e-63 246.5 395 45.3
Eucgr.A02891 Eucalyptus grandis HOM05D005186 ORTHO05D006278 4.1e-63 246.1 424 44.6
Thecc.03G156500 Theobroma cacao HOM05D005186 ORTHO05D006278 5.3e-63 245.7 395 46.1
TWI23G1038 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 5.3e-63 245.7 406 46.6
Duzib205G1009 Durio zibethinus HOM05D005186 ORTHO05D006278 4.5e-62 242.7 397 47.6
Sabra15G0140200 Salix brachista HOM05D005186 ORTHO05D006278 1.0e-61 241.5 402 46.3
vmacro06793 Vaccinium macrocarpon HOM05D005186 ORTHO05D006278 2.2e-61 240.4 420 44.0
COL.COLO4_14129 Corchorus olitorius HOM05D005186 ORTHO05D006278 2.9e-61 240.0 376 47.9
TWI39G1272 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 2.9e-61 240.0 406 44.3
Gohir.D03G107500 Gossypium hirsutum HOM05D005186 ORTHO05D006278 5.0e-61 239.2 398 45.2
Gohir.A03G058600 Gossypium hirsutum HOM05D005186 ORTHO05D006278 6.5e-61 238.8 398 45.7
Sopen03g023730 Solanum pennellii HOM05D005186 ORTHO05D006278 1.1e-60 238.0 393 43.5
Nitab4.5_0001383g0010 Nicotiana tabacum HOM05D005186 ORTHO05D006278 1.9e-60 237.3 405 43.2
RhsimUnG0046700 Rhododendron simsii HOM05D005186 ORTHO05D006278 1.9e-60 237.3 422 46.2
Solyc03g083970.3 Solanum lycopersicum HOM05D005186 ORTHO05D006278 4.2e-60 236.1 391 43.2
PGSC0003DMG400013858 Solanum tuberosum HOM05D005186 ORTHO05D006278 5.5e-60 235.7 418 41.4
Dinv28566 Davidia involucrata HOM05D005186 ORTHO05D006278 1.2e-59 234.6 416 45.2
Gorai.003G113800 Gossypium raimondii HOM05D005186 ORTHO05D006278 2.1e-59 233.8 398 44.7
Manes.14G035500 Manihot esculenta HOM05D005186 ORTHO05D006278 6.1e-59 232.3 396 45.2
Hma1.2p1_0432F.1_g151690 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 1.0e-58 231.5 418 46.2
Potri.012G126000 Populus trichocarpa HOM05D005186 ORTHO05D006278 1.0e-58 231.5 404 44.6
CsaV3_7G006320 Cucumis sativus L. HOM05D005186 ORTHO05D006278 1.4e-58 231.1 409 44.5
CANSAT56G0052 Cannabis sativa HOM05D005186 ORTHO05D006278 2.3e-58 230.3 405 43.7
Haze_13870 Corylus avellana HOM05D005186 ORTHO05D006278 5.2e-58 229.2 400 45.8
Cpa.g.sc3.315 Carica papaya HOM05D005186 ORTHO05D006278 1.1e-57 228.0 406 44.3
SalBow2G2587 Salvia bowleyana HOM05D005186 ORTHO05D006278 1.1e-57 228.0 388 45.6
PGR042G0730 Punica granatum HOM05D005186 ORTHO05D006278 1.5e-57 227.6 402 43.3
Potri.015G126800 Populus trichocarpa HOM05D005186 ORTHO05D006278 2.6e-57 226.9 409 44.5
AUR62015515 Chenopodium quinoa HOM05D005186 ORTHO05D006278 3.3e-57 226.5 251 59.0
Actinidia13575 Actinidia chinensis HOM05D005186 ORTHO05D006278 4.4e-57 226.1 439 43.5
Migut.F00469 Erythranthe guttata HOM05D005186 ORTHO05D006278 4.4e-57 226.1 411 42.3
Aqoxy7G00728 Aquilegia oxysepala HOM05D005186 ORTHO05D006278 7.4e-57 225.3 389 43.2
AUR62002195 Chenopodium quinoa HOM05D005186 ORTHO05D006278 7.4e-57 225.3 253 58.9
Manes.06G135200 Manihot esculenta HOM05D005186 ORTHO05D006278 2.8e-56 223.4 407 45.9
Cc02_g04200 Coffea canephora HOM05D005186 ORTHO05D006278 3.7e-56 223.0 419 43.4
MELO3C018660.2 Cucumis melo HOM05D005186 ORTHO05D006278 4.8e-56 222.6 410 42.9
Oeu022491.2 Olea europaea HOM05D005186 ORTHO05D006278 4.8e-56 222.6 442 42.5
HanXRQChr14g0461411 Helianthus annuus HOM05D005186 ORTHO05D006278 1.1e-55 221.5 377 44.8
Nitab4.5_0003875g0030 Nicotiana tabacum HOM05D005186 ORTHO05D006278 1.1e-55 221.5 385 42.1
Prupe.2G277700 Prunus persica HOM05D005186 ORTHO05D006278 2.4e-55 220.3 413 44.1
ClCG09G015150 Citrullus lanatus HOM05D005186 ORTHO05D006278 7.0e-55 218.8 409 41.8
Nn1g01074 Nelumbo nucifera HOM05D005186 ORTHO05D006278 1.2e-54 218.0 398 44.2
SGA_v2.0_scaffold543G52822 Striga asiatica HOM05D005186 ORTHO05D006278 1.2e-54 218.0 404 42.6
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-54 217.6 406 42.1
Lsat_1_v5_gn_2_129120 Lactuca sativa HOM05D005186 ORTHO05D006278 1.6e-54 217.6 409 43.0
PGR142G0385 Punica granatum HOM05D005186 ORTHO05D006278 1.6e-54 217.6 424 39.6
TAR374G0329 Trochodendron aralioides HOM05D005186 ORTHO05D006278 3.5e-54 216.5 408 45.1
Oeu042561.2 Olea europaea HOM05D005186 ORTHO05D006278 5.9e-54 215.7 436 41.3
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 1.0e-53 214.9 363 44.9
Sed0005126 Sechium edule HOM05D005186 ORTHO05D006278 1.0e-53 214.9 309 47.6
FAN06G2498 Fragaria x ananassa HOM05D005186 ORTHO05D006278 2.2e-53 213.8 397 43.8
DCAR_020192 Daucus carota HOM05D005186 ORTHO05D006278 2.9e-53 213.4 392 44.1
FAN10G1701 Fragaria x ananassa HOM05D005186 ORTHO05D006278 3.8e-53 213.0 409 41.6
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.0e-53 212.6 404 43.8
unitig_1.g29355 Utricularia gibba HOM05D005186 ORTHO05D006278 5.0e-53 212.6 402 42.3
unitig_747.g22057 Utricularia gibba HOM05D005186 ORTHO05D006278 5.0e-53 212.6 402 42.3
FvH4_7g27600 Fragaria vesca HOM05D005186 ORTHO05D006278 8.5e-53 211.8 404 43.8
FAN03G1399 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.1e-52 211.5 406 41.6
Lj8A42G21 Lonicera japonica HOM05D005186 ORTHO05D006278 1.1e-52 211.5 411 41.8
SGA_v2.0_scaffold2G01194 Striga asiatica HOM05D005186 ORTHO05D006278 1.1e-52 211.5 401 41.4
Hma1.2p1_1640F.1_g295100 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 1.9e-52 210.7 400 42.0
RcHm_v2.0_Chr1g0374461 Rosa chinensis HOM05D005186 ORTHO05D006278 1.9e-52 210.7 407 43.0
TAR375G0993 Trochodendron aralioides HOM05D005186 ORTHO05D006278 1.9e-52 210.7 324 48.1
Lj3g0017931 Lotus japonicus HOM05D005186 ORTHO05D006278 4.2e-52 209.5 409 40.8
Peaxi162Scf00241g00318 Petunia axillaris HOM05D005186 ORTHO05D006278 4.2e-52 209.5 394 42.1
QL09p019611 Quercus lobata HOM05D005186 ORTHO05D006278 4.2e-52 209.5 421 42.8
MSTRG.128 Avicennia marina HOM05D005186 ORTHO05D006278 2.7e-51 206.8 416 41.6
PSO170G0780 Papaver somniferum HOM05D005186 ORTHO05D006278 6.1e-51 205.7 414 42.0
Sabra12G0094900 Salix brachista HOM05D005186 ORTHO05D006278 1.0e-50 204.9 428 42.5
HPP92_022436 Vanilla planifolia HOM05D005186 ORTHO05D006278 1.0e-50 204.9 388 43.0
arahy.Tifrunner.gnm1.ann1.UNN1LQ Arachis hypogaea HOM05D005186 ORTHO05D006278 1.8e-50 204.1 311 44.4
Nn6g34030 Nelumbo nucifera HOM05D005186 ORTHO05D006278 1.8e-50 204.1 384 43.0
arahy.Tifrunner.gnm1.ann1.7NC073 Arachis hypogaea HOM05D005186 ORTHO05D006278 2.3e-50 203.8 301 44.9
VMungo1127G0816 Vigna mungo HOM05D005186 ORTHO05D006278 2.3e-50 203.8 425 40.2
ECA238G0955 Erigeron canadensis HOM05D005186 ORTHO05D006278 3.0e-50 203.4 379 42.0
Sed0012571 Sechium edule HOM05D005186 ORTHO05D006278 1.2e-49 201.4 399 39.6
TPR.G3671 Trifolium pratense HOM05D005186 ORTHO05D006278 2.0e-49 200.7 419 38.2
Lalb_Chr01g0000291 Lupinus albus HOM05D005186 ORTHO05D006278 2.6e-49 200.3 282 45.7
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 5.7e-49 199.1 422 37.9
Glyma.12G005300 Glycine max HOM05D005186 ORTHO05D006278 5.7e-49 199.1 416 37.7
CDE02G0091 Ceratophyllum demersum HOM05D005186 ORTHO05D006278 2.8e-48 196.8 381 40.7
PSO017G1100 Papaver somniferum HOM05D005186 ORTHO05D006278 3.1e-47 193.4 412 41.5
MBI04_g37589_MAGBIO Magnolia biondii HOM05D005186 ORTHO05D006278 5.4e-47 192.6 382 41.1
CiPaw.04G060200 Carya illinoinensis HOM05D005186 ORTHO05D006278 9.1e-47 191.8 369 42.8
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 1.6e-46 191.0 310 43.2
Psat7g207000 Pisum sativum HOM05D005186 ORTHO05D006278 3.5e-46 189.9 188 56.9
Medtr4g036110 Medicago truncatula HOM05D005186 ORTHO05D006278 1.0e-45 188.3 420 38.6
Phvul.011G006100 Phaseolus vulgaris HOM05D005186 ORTHO05D006278 2.9e-45 186.8 390 42.1
C03p64500 Brassica napus HOM05D005186 ORTHO05D006278 6.5e-45 185.7 428 38.8
BcaC01g02463 Brassica carinata HOM05D005186 ORTHO05D006278 1.9e-44 184.1 428 38.6
GSVIVG01018630001 Vitis vinifera HOM05D005186 ORTHO05D006278 9.4e-44 181.8 251 48.6
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 1.8e-42 177.6 463 33.9
Ca_25005_v3 Cicer arietinum L. HOM05D005186 ORTHO05D006278 1.8e-42 177.6 162 61.7
Thhalv10004201m.g Eutrema salsugineum HOM05D005186 ORTHO05D006278 6.8e-42 175.6 459 35.9
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 2.0e-41 174.1 466 33.5
AL8G39220 Arabidopsis lyrata HOM05D005186 ORTHO05D006278 3.4e-41 173.3 459 34.0
BolC3t18705H Brassica oleracea HOM05D005186 ORTHO05D006278 5.7e-41 172.6 438 36.5
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 5.7e-41 172.6 163 58.9
CiPaw.03G094100 Carya illinoinensis HOM05D005186 ORTHO05D006278 1.3e-40 171.4 347 40.9
CARHR276170 Cardamine hirsuta HOM05D005186 ORTHO05D006278 1.7e-40 171.0 459 37.3
Carub.0008s2307 Capsella rubella HOM05D005186 ORTHO05D006278 3.7e-40 169.9 471 35.0
Thecc.01G380900 Theobroma cacao HOM05D005186 ORTHO05D006278 6.3e-40 169.1 277 43.3
AT5G62390 Arabidopsis thaliana HOM05D005186 ORTHO05D006278 8.3e-40 168.7 453 34.2
Zm00001eb379410 Zea mays HOM05D005186 ORTHO05D006278 5.4e-39 166.0 275 41.8
ATR1153G063 Amborella trichopoda HOM05D005186 ORTHO05D006278 9.1e-39 165.2 399 39.8
BraA01t01233Z Brassica rapa HOM05D005186 ORTHO05D006278 1.6e-38 164.5 474 33.8
THA.LOC104821410 Tarenaya hassleriana HOM05D005186 ORTHO05D006278 2.0e-38 164.1 446 35.4
A01p12890 Brassica napus HOM05D005186 ORTHO05D006278 2.7e-38 163.7 477 32.7
COL.COLO4_12507 Corchorus olitorius HOM05D005186 ORTHO05D006278 1.3e-37 161.4 310 41.0
BcaNung02779 Brassica carinata HOM05D005186 ORTHO05D006278 3.8e-37 159.8 167 53.9
Sp2g25560 Schrenkiella parvula HOM05D005186 ORTHO05D006278 1.1e-36 158.3 469 33.5
Aa31LG11G1230 Aethionema arabicum HOM05D005186 ORTHO05D006278 1.5e-36 157.9 169 55.6
CSS0020740 Camellia sinensis var. sinensis HOM05D005186 ORTHO05D006278 1.5e-36 157.9 339 43.4
Os06g0104400 Oryza sativa ssp. japonica HOM05D005186 ORTHO05D006278 1.4e-34 151.4 171 53.2
HanXRQChr05g0146091 Helianthus annuus HOM05D005186 ORTHO05D006278 5.2e-34 149.4 164 55.5
BcaC01g02462 Brassica carinata HOM05D005186 ORTHO05D006278 2.0e-33 147.5 138 58.0
SHI13968 Sapria himalayana HOM05D005186 ORTHO05D006278 3.4e-33 146.7 299 36.8
CDE11G1075 Ceratophyllum demersum HOM05D005186 ORTHO05D006278 2.9e-32 143.7 395 38.2
Zm00001eb229450 Zea mays HOM05D005186 ORTHO05D006278 3.7e-32 143.3 186 47.3
Os02g0105500 Oryza sativa ssp. japonica HOM05D005186 ORTHO05D006278 1.6e-30 137.9 178 48.3
Atru.chr5.265 Acer truncatum HOM05D005186 ORTHO05D006278 1.3e-24 118.2 125 51.2
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 6.4e-16 89.4 108 44.4
GSVIVG01000691001 Vitis vinifera HOM05D005186 ORTHO05D006278 1.3e-13 81.6 92 50.0
COL.COLO4_07114 Corchorus olitorius HOM05D005186 ORTHO05D006278 3.0e-13 80.5 80 55.0
CAN.G319.13 Capsicum annuum HOM05D005186 ORTHO05D006278 8.6e-13 79.0 76 56.6
GSVIVG01000692001 Vitis vinifera HOM05D005186 ORTHO05D006278 3.3e-12 77.0 92 47.8
Mapoly0035s0113 Marchantia polymorpha HOM05D006269 ORTHO05D001487 1.8e-10 71.2 110 38.2
arahy.Tifrunner.gnm1.ann1.II6FYR Arachis hypogaea HOM05D006269 ORTHO05D001487 2.0e-09 67.8 128 32.8
Mapoly0045s0108 Marchantia polymorpha HOM05D006269 ORTHO05D001487 7.6e-09 65.9 100 36.0
SEGI_35486 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 2.9e-08 63.9 121 32.2
CSS0003747 Camellia sinensis var. sinensis HOM05D005186 ORTHO05D006278 4.9e-08 63.2 61 55.7
Rhsim10G0141000 Rhododendron simsii HOM05D006269 ORTHO05D001487 6.4e-08 62.8 148 27.7
SEGI_27071 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 6.4e-08 62.8 121 32.2
arahy.Tifrunner.gnm1.ann1.YSVF0U Arachis hypogaea HOM05D006269 ORTHO05D001487 8.4e-08 62.4 128 31.2
ECA238G1972 Erigeron canadensis HOM05D005186 ORTHO05D006278 8.4e-08 62.4 63 52.4
SalBow5G2113 Salvia bowleyana HOM05D006269 ORTHO05D001487 1.9e-07 61.2 112 32.1
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 2.4e-07 60.8 107 36.4
SEGI_37331 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 3.2e-07 60.5 107 30.8
Sabra02G0145300 Salix brachista HOM05D006269 ORTHO05D001487 4.1e-07 60.1 117 30.8
ECA240G2267 Erigeron canadensis HOM05D001977 ORTHO05D002246 5.4e-07 59.7 155 25.2
MBI06_g04302_MAGBIO Magnolia biondii HOM05D006269 ORTHO05D001487 7.1e-07 59.3 119 30.3
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 7.1e-07 59.3 99 40.4
Pp3c13_3400 Physcomitrium patens HOM05D006269 ORTHO05D001487 9.2e-07 58.9 131 30.5
GSVIVG01027028001 Vitis vinifera HOM05D006269 ORTHO05D001487 9.2e-07 58.9 110 31.8
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 1.2e-06 58.5 101 32.7
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.2e-06 58.5 101 32.7
Potri.002G166300 Populus trichocarpa HOM05D006269 ORTHO05D001487 1.2e-06 58.5 119 30.3
Aqoxy1G02938 Aquilegia oxysepala HOM05D006269 ORTHO05D001487 1.6e-06 58.2 112 30.4
CAN.G1067.7 Capsicum annuum HOM05D005186 ORTHO05D006278 2.1e-06 57.8 157 30.6
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 2.1e-06 57.8 136 32.4
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 2.1e-06 57.8 101 36.6
Lalb_Chr10g0096511 Lupinus albus HOM05D006269 ORTHO05D001487 2.1e-06 57.8 113 28.3
Thecc.01G349600 Theobroma cacao HOM05D006269 ORTHO05D001487 2.1e-06 57.8 162 27.8
vmacro13212 Vaccinium macrocarpon HOM05D006269 ORTHO05D001487 2.1e-06 57.8 123 30.1
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 2.7e-06 57.4 102 35.3
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 2.7e-06 57.4 99 35.4
MELO3C021171.2 Cucumis melo HOM05D006269 ORTHO05D001487 2.7e-06 57.4 143 31.5
QL04p034904 Quercus lobata HOM05D006269 ORTHO05D001487 2.7e-06 57.4 168 26.8
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 2.7e-06 57.4 103 40.8
Cpa.g.sc184.9 Carica papaya HOM05D006269 ORTHO05D001487 4.6e-06 56.6 113 31.0
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 4.6e-06 56.6 101 32.7
Pp3c7_10910 Physcomitrium patens HOM05D002157 ORTHO05D002197 4.6e-06 56.6 102 33.3
PGSC0003DMG400000079 Solanum tuberosum HOM05D006269 ORTHO05D001487 4.6e-06 56.6 108 30.6
EL10Ac1g00334 Beta vulgaris HOM05D006269 ORTHO05D001487 6.0e-06 56.2 160 28.1
Peaxi162Scf01254g00022 Petunia axillaris HOM05D006269 ORTHO05D001487 6.0e-06 56.2 124 29.8
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 6.0e-06 56.2 101 35.6
Pp3c19_17670 Physcomitrium patens HOM05D006269 ORTHO05D001487 6.0e-06 56.2 103 35.0
Sed0002830 Sechium edule HOM05D006269 ORTHO05D001487 6.0e-06 56.2 139 30.2
SEGI_15116 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 6.0e-06 56.2 99 33.3
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 7.8e-06 55.8 152 28.3
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 7.8e-06 55.8 99 34.3
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.8e-06 55.8 101 38.6


User provided reference genes

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