Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 1.6e-117 427.6 582 100.0
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 3.4e-51 207.2 258 74.8
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 4.2e-46 190.3 259 63.3
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 8.0e-45 186.0 254 63.8
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 2.3e-36 157.9 240 68.3
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 5.2e-36 156.8 262 63.0
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.5e-35 155.2 254 65.4
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 1.5e-35 155.2 247 66.4
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 2.0e-35 154.8 249 66.3
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.1e-33 149.1 249 64.3
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 5.4e-33 146.7 259 61.4
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.0e-32 144.8 277 59.2
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 2.0e-32 144.8 242 64.9
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 7.8e-32 142.9 264 62.5
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 3.0e-31 141.0 281 55.5
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 5.0e-31 140.2 268 60.4
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 8.6e-31 139.4 251 64.5
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 8.6e-31 139.4 277 58.5
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 1.1e-30 139.0 260 60.8
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.5e-30 137.9 251 64.1
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 9.5e-30 136.0 251 63.7
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.2e-29 135.6 250 56.8
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.2e-29 135.6 251 63.7
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.6e-29 135.2 216 70.8
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.1e-29 134.8 251 63.7
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 8.0e-29 132.9 234 64.5
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.8e-28 131.7 271 58.7
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 4.0e-28 130.6 234 65.8
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 6.8e-28 129.8 259 56.8
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 3.4e-27 127.5 253 60.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 4.4e-27 127.1 261 64.4
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 5.8e-27 126.7 252 59.9
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 3.7e-26 124.0 234 67.5
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 3.7e-26 124.0 274 57.3
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 1.4e-25 122.1 256 59.8
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.4e-25 121.3 243 62.6
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 3.2e-25 120.9 241 56.8
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 3.2e-25 120.9 234 65.4
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 4.1e-25 120.6 233 63.1
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.2e-24 119.0 122 49.2
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 1.6e-24 118.6 255 59.6
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 1.0e-23 115.9 256 60.2
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.0e-23 115.9 240 60.4
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 5.1e-23 113.6 216 66.2
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 5.1e-23 113.6 245 60.8
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 1.1e-22 112.5 244 61.1
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 2.5e-22 111.3 243 61.7
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.5e-22 111.3 256 59.0
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 3.3e-22 110.9 242 63.2
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 9.5e-22 109.4 251 59.0
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.2e-21 109.0 249 59.4
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 1.6e-21 108.6 237 55.7
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 2.8e-21 107.8 238 64.3
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 8.1e-21 106.3 242 61.6
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 1.1e-20 105.9 197 60.4
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 1.8e-20 105.1 251 59.8
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 1.8e-20 105.1 251 59.8
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 5.2e-20 103.6 242 63.6
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 6.8e-20 103.2 245 60.0
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.2e-19 102.4 216 66.7
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.5e-19 102.1 260 55.0
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.6e-19 101.3 250 42.8
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 2.6e-19 101.3 214 63.1
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 4.4e-19 100.5 246 52.8
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 5.8e-19 100.1 232 61.2
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 9.9e-19 99.4 236 62.7
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.3e-18 99.0 233 59.7
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.7e-18 98.6 117 44.4
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 2.2e-18 98.2 244 50.4
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 4.9e-18 97.1 221 62.9
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 6.4e-18 96.7 222 64.0
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.1e-17 95.9 244 60.7
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.4e-17 95.5 216 65.7
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 1.4e-17 95.5 216 65.7
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.9e-17 95.1 216 65.7
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 3.2e-17 94.4 233 59.2
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.6e-16 92.0 232 59.9
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 1.3e-15 89.0 90 43.3
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 6.6e-15 86.7 190 64.7
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 8.6e-15 86.3 239 59.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.8e-12 78.6 115 40.0
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.5e-11 75.5 82 43.9
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 3.4e-11 74.3 73 54.8
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 4.4e-11 73.9 84 46.4
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 9.9e-11 72.8 207 66.7
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 9.9e-11 72.8 248 51.2
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 1.3e-10 72.4 91 44.0
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 8.4e-10 69.7 99 36.4
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 4.2e-09 67.4 73 47.9
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 2.7e-08 64.7 102 43.1
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.0e-07 62.8 86 39.5
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 3.0e-07 61.2 87 39.1


User provided reference genes

Program Settings