Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 8.4e-99 363.6 175 100.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 5.5e-82 307.8 176 84.1
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 4.7e-41 171.8 178 53.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 5.0e-27 125.2 165 46.7
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 5.6e-26 121.7 151 47.7
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 3.2e-21 105.9 188 37.2
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 5.4e-21 105.1 188 37.8
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.6e-20 103.6 143 43.4
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.6e-20 103.6 143 43.4
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 4.6e-20 102.1 145 45.5
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 7.8e-20 101.3 174 36.8
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 3.9e-19 99.0 168 38.1
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 5.1e-19 98.6 183 36.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 6.6e-19 98.2 174 35.1
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 8.6e-19 97.8 189 35.4
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.5e-18 96.3 165 38.8
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 3.6e-17 92.4 144 39.6
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 3.6e-17 92.4 165 38.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.7e-17 92.0 159 37.7
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 8.1e-17 91.3 137 41.6
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 8.1e-17 91.3 147 38.8
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.1e-17 91.3 192 34.9
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.1e-17 91.3 192 34.9
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 1.1e-16 90.9 142 38.7
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.4e-16 90.5 149 37.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.4e-16 90.5 163 39.3
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 2.3e-16 89.7 174 35.6
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.3e-16 89.7 159 38.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.3e-16 89.7 159 38.4
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 3.1e-16 89.4 164 37.2
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 5.2e-16 88.6 157 37.6
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 5.2e-16 88.6 165 35.8
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 8.9e-16 87.8 144 38.2
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 8.9e-16 87.8 164 36.6
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.5e-15 87.0 171 36.3
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 2.6e-15 86.3 149 36.9
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 4.4e-15 85.5 157 38.9
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 5.8e-15 85.1 144 41.0
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 7.6e-15 84.7 147 38.1
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 9.9e-15 84.3 145 39.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 9.9e-15 84.3 140 38.6
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.3e-14 84.0 172 34.3
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.7e-14 83.6 164 35.4
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.7e-14 83.6 175 36.6
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.2e-14 83.2 164 36.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 2.2e-14 83.2 156 33.3
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.9e-14 82.8 152 33.6
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.9e-14 82.8 146 37.7
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 2.9e-14 82.8 148 38.5
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 3.7e-14 82.4 141 35.5
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 4.9e-14 82.0 153 32.7
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.9e-14 82.0 140 40.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 4.9e-14 82.0 190 32.6
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 4.9e-14 82.0 173 34.1
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 4.9e-14 82.0 172 34.9
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 6.4e-14 81.6 153 32.0
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.9e-13 80.1 144 38.2
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.4e-13 79.7 143 38.5
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.4e-13 79.7 149 32.2
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.4e-13 79.7 149 32.9
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.2e-13 79.3 163 36.8
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 3.2e-13 79.3 149 32.2
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 5.4e-13 78.6 166 35.5
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 7.1e-13 78.2 152 38.2
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 9.2e-13 77.8 139 38.1
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 9.2e-13 77.8 159 37.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 1.6e-12 77.0 154 36.4
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.7e-12 76.3 153 31.4
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.7e-12 76.3 172 31.4
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.7e-12 76.3 172 31.4
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.7e-12 76.3 201 30.3
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.5e-12 75.9 153 31.4
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.5e-12 75.9 153 31.4
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 3.5e-12 75.9 164 33.5
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 3.5e-12 75.9 175 34.9
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 4.6e-12 75.5 153 35.3
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 4.6e-12 75.5 171 35.7
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 7.8e-12 74.7 186 32.3
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 7.8e-12 74.7 150 34.7
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 7.8e-12 74.7 152 32.2
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.8e-12 74.7 103 45.6
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.0e-11 74.3 152 30.3
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.0e-11 74.3 152 30.3
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.0e-11 74.3 155 32.3
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.3e-11 73.9 132 37.9
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.7e-11 73.6 155 36.1
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.3e-11 73.2 126 39.7
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 3.0e-11 72.8 152 30.3
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 3.0e-11 72.8 152 30.3
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 3.0e-11 72.8 188 28.7
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 3.0e-11 72.8 166 33.7
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 6.6e-11 71.6 139 32.4
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 6.6e-11 71.6 175 32.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 8.6e-11 71.2 161 31.7
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.1e-10 70.9 149 33.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.1e-10 70.9 176 33.5
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.9e-10 70.1 185 31.9
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.9e-10 70.1 138 34.1
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.3e-10 69.3 173 30.6
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.6e-09 67.0 135 30.4
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 6.2e-09 65.1 142 32.4
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 1.4e-08 63.9 163 27.6
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.8e-08 63.5 157 28.7
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-08 63.5 190 31.1
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 3.1e-08 62.8 190 30.5
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.2e-07 60.8 130 33.8
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.2e-07 60.8 61 55.7
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.5e-07 60.5 152 31.6
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 5.8e-07 58.5 168 32.7
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 2.2e-06 56.6 52 48.1
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-06 56.2 85 42.4
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-06 56.2 109 37.6
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 2.9e-06 56.2 150 28.7
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.8e-06 55.8 109 33.0
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 6.4e-06 55.1 136 33.1


User provided reference genes

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