Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04160 Selenicereus undatus HOM05D000425 ORTHO05D000373 5.1e-102 374.4 187 100.0
Sc09g0006100 Simmondsia chinensis HOM05D000425 ORTHO05D000373 4.1e-35 152.1 184 53.3
EL10Ac7g16775 Beta vulgaris HOM05D000425 ORTHO05D000373 7.0e-35 151.4 108 73.1
Thecc.10G080300 Theobroma cacao HOM05D000425 ORTHO05D000373 1.1e-32 144.1 192 47.9
Sc23g0004910 Simmondsia chinensis HOM05D000425 ORTHO05D000373 1.9e-32 143.3 190 51.1
GSVIVG01016234001 Vitis vinifera HOM05D000425 ORTHO05D000373 1.6e-31 140.2 193 48.7
AUR62014264 Chenopodium quinoa HOM05D000425 ORTHO05D000373 4.7e-31 138.7 185 48.1
Duzib128G1117 Durio zibethinus HOM05D000425 ORTHO05D000373 6.2e-31 138.3 191 51.3
Duzib114G0694 Durio zibethinus HOM05D000425 ORTHO05D000373 6.8e-30 134.8 192 49.5
TAR633G2021 Trochodendron aralioides HOM05D000425 ORTHO05D000373 8.9e-30 134.4 197 47.2
THA.LOC104825222 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 1.2e-29 134.0 194 45.9
COL.COLO4_12181 Corchorus olitorius HOM05D000425 ORTHO05D000373 2.6e-29 132.9 192 46.9
Cpa.g.sc53.114 Carica papaya HOM05D000425 ORTHO05D000373 5.8e-29 131.7 189 47.6
Potri.008G036300 Populus trichocarpa HOM05D000425 ORTHO05D000373 2.2e-28 129.8 193 47.2
CSS0002138 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 6.4e-28 128.3 189 48.1
Cc02_g11030 Coffea canephora HOM05D000425 ORTHO05D000373 6.4e-28 128.3 193 44.0
PSO339G4452 Papaver somniferum HOM05D000425 ORTHO05D000373 8.3e-28 127.9 194 43.8
Ciclev10031131m.g Citrus clementina HOM05D000425 ORTHO05D000373 1.4e-27 127.1 188 48.9
Rhsim09G0149600 Rhododendron simsii HOM05D000425 ORTHO05D000373 1.4e-27 127.1 189 48.1
RhsimUnG0187000 Rhododendron simsii HOM05D000425 ORTHO05D000373 1.4e-27 127.1 189 48.1
Gohir.D05G294800 Gossypium hirsutum HOM05D000425 ORTHO05D000373 2.4e-27 126.3 201 45.8
Gorai.009G311500 Gossypium raimondii HOM05D000425 ORTHO05D000373 2.4e-27 126.3 201 45.8
HanXRQChr07g0195041 Helianthus annuus HOM05D000425 ORTHO05D000373 2.4e-27 126.3 188 47.3
Lsat_1_v5_gn_2_112901 Lactuca sativa HOM05D000425 ORTHO05D000373 2.4e-27 126.3 189 49.2
TWI38G1268 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 2.4e-27 126.3 191 47.1
PSO063G3625 Papaver somniferum HOM05D000425 ORTHO05D000373 4.1e-27 125.6 192 44.3
Peaxi162Scf00662g00415 Petunia axillaris HOM05D000425 ORTHO05D000373 4.1e-27 125.6 192 44.3
Aa31LG5G20470 Aethionema arabicum HOM05D000425 ORTHO05D000373 7.0e-27 124.8 188 48.4
Gohir.A05G294300 Gossypium hirsutum HOM05D000425 ORTHO05D000373 7.0e-27 124.8 201 45.3
PGSC0003DMG400007424 Solanum tuberosum HOM05D000425 ORTHO05D000373 7.0e-27 124.8 190 45.8
Manes.07G095400 Manihot esculenta HOM05D000425 ORTHO05D000373 1.2e-26 124.0 188 47.3
HanXRQChr14g0456651 Helianthus annuus HOM05D000425 ORTHO05D000373 2.0e-26 123.2 188 46.8
Hma1.2p1_0438F.1_g153100 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 2.0e-26 123.2 188 45.2
Nn2g13759 Nelumbo nucifera HOM05D000425 ORTHO05D000373 3.5e-26 122.5 194 43.8
Phvul.007G097200 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 3.5e-26 122.5 187 50.8
Dinv36404 Davidia involucrata HOM05D000425 ORTHO05D000373 4.6e-26 122.1 189 47.1
Glyma.10G208800 Glycine max HOM05D000425 ORTHO05D000373 7.8e-26 121.3 187 47.1
Solyc11g008440.3 Solanum lycopersicum HOM05D000425 ORTHO05D000373 7.8e-26 121.3 189 45.5
MBI17_g12508_MAGBIO Magnolia biondii HOM05D000425 ORTHO05D000373 1.0e-25 120.9 195 44.6
AL4G36430 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 1.7e-25 120.2 191 44.5
CDE11G0827 Ceratophyllum demersum HOM05D000425 ORTHO05D000373 1.7e-25 120.2 187 43.3
Nitab4.5_0004325g0070 Nicotiana tabacum HOM05D000425 ORTHO05D000373 2.3e-25 119.8 192 43.2
VMungo0720G3028 Vigna mungo HOM05D000425 ORTHO05D000373 2.3e-25 119.8 187 49.7
MD01G1104600 Malus domestica HOM05D000425 ORTHO05D000373 3.0e-25 119.4 191 44.5
Oeu000807.1 Olea europaea HOM05D000425 ORTHO05D000373 3.0e-25 119.4 187 42.2
CAN.G321.40 Capsicum annuum HOM05D000425 ORTHO05D000373 3.9e-25 119.0 192 43.8
Manes.10G049300 Manihot esculenta HOM05D000425 ORTHO05D000373 5.0e-25 118.6 194 45.4
vmacro04853 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 5.0e-25 118.6 190 46.3
PGR044G0567 Punica granatum HOM05D000425 ORTHO05D000373 6.6e-25 118.2 197 45.7
Migut.F01722 Erythranthe guttata HOM05D000425 ORTHO05D000373 8.6e-25 117.9 189 42.9
Glyma.20G181900 Glycine max HOM05D000425 ORTHO05D000373 8.6e-25 117.9 187 47.6
Actinidia32438 Actinidia chinensis HOM05D000425 ORTHO05D000373 1.5e-24 117.1 190 44.7
Carub.0004s2118 Capsella rubella HOM05D000425 ORTHO05D000373 1.9e-24 116.7 192 44.3
Lalb_Chr02g0152151 Lupinus albus HOM05D000425 ORTHO05D000373 1.9e-24 116.7 193 46.1
Aqoxy2G01796 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 3.3e-24 115.9 196 43.4
Sopen03g015310 Solanum pennellii HOM05D000425 ORTHO05D000373 3.3e-24 115.9 188 41.5
CDE05G0235 Ceratophyllum demersum HOM05D000425 ORTHO05D000373 4.3e-24 115.5 187 43.3
Oeu046635.3 Olea europaea HOM05D000425 ORTHO05D000373 5.6e-24 115.2 196 43.9
Peaxi162Scf00253g00417 Petunia axillaris HOM05D000425 ORTHO05D000373 7.3e-24 114.8 187 42.8
Lj3A881T67 Lonicera japonica HOM05D000425 ORTHO05D000373 9.5e-24 114.4 195 43.6
BcaC02g12041 Brassica carinata HOM05D000425 ORTHO05D000373 1.2e-23 114.0 190 44.2
C04p08580 Brassica napus HOM05D000425 ORTHO05D000373 1.2e-23 114.0 190 44.2
BolC4t22453H Brassica oleracea HOM05D000425 ORTHO05D000373 1.2e-23 114.0 190 44.2
ECA238G4802 Erigeron canadensis HOM05D000425 ORTHO05D000373 1.2e-23 114.0 195 43.6
RcHm_v2.0_Chr1g0362811 Rosa chinensis HOM05D000425 ORTHO05D000373 1.2e-23 114.0 193 43.0
PGSC0003DMG400013962 Solanum tuberosum HOM05D000425 ORTHO05D000373 1.6e-23 113.6 188 41.0
Solyc03g063030.4 Solanum lycopersicum HOM05D000425 ORTHO05D000373 2.1e-23 113.2 188 41.0
BraA05t19682Z Brassica rapa HOM05D000425 ORTHO05D000373 2.8e-23 112.8 190 44.2
Medtr1g050328 Medicago truncatula HOM05D000425 ORTHO05D000373 3.6e-23 112.5 187 45.5
QL08p054920 Quercus lobata HOM05D000425 ORTHO05D000373 3.6e-23 112.5 187 44.4
CSS0006346 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 4.7e-23 112.1 111 61.3
Lalb_Chr21g0313741 Lupinus albus HOM05D000425 ORTHO05D000373 4.7e-23 112.1 188 45.7
Nitab4.5_0002233g0010 Nicotiana tabacum HOM05D000425 ORTHO05D000373 4.7e-23 112.1 192 39.6
TAR623G0773 Trochodendron aralioides HOM05D000425 ORTHO05D000373 4.7e-23 112.1 192 42.7
MSTRG.384 Avicennia marina HOM05D000425 ORTHO05D000373 8.1e-23 111.3 192 41.7
A05p07170 Brassica napus HOM05D000425 ORTHO05D000373 1.1e-22 110.9 172 45.9
Nn2g11557 Nelumbo nucifera HOM05D000425 ORTHO05D000373 1.4e-22 110.5 191 40.3
Sp4g21480 Schrenkiella parvula HOM05D000425 ORTHO05D000373 1.4e-22 110.5 195 43.6
Aqoxy1G01173_Aqoxy1G01174 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 1.8e-22 110.2 194 40.2
BcaC02g12909 Brassica carinata HOM05D000425 ORTHO05D000373 1.8e-22 110.2 190 41.6
BcaC02g12911 Brassica carinata HOM05D000425 ORTHO05D000373 1.8e-22 110.2 190 41.6
Ca_24104_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 1.8e-22 110.2 188 45.2
Lj6g0013335 Lotus japonicus HOM05D000425 ORTHO05D000373 1.8e-22 110.2 187 44.4
MD07G1171200 Malus domestica HOM05D000425 ORTHO05D000373 1.8e-22 110.2 190 44.7
Sopen11g004230 Solanum pennellii HOM05D000425 ORTHO05D000373 1.8e-22 110.2 108 59.3
CARHR133890 Cardamine hirsuta HOM05D000425 ORTHO05D000373 2.3e-22 109.8 115 57.4
DCAR_019090 Daucus carota HOM05D000425 ORTHO05D000373 3.1e-22 109.4 187 44.9
vmacro07124 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 3.1e-22 109.4 190 42.6
C04p67060 Brassica napus HOM05D000425 ORTHO05D000373 4.0e-22 109.0 191 42.9
BolC4t28208H Brassica oleracea HOM05D000425 ORTHO05D000373 4.0e-22 109.0 191 42.9
Gorai.011G238000 Gossypium raimondii HOM05D000425 ORTHO05D000373 4.0e-22 109.0 191 42.9
Nitab4.5_0004385g0030 Nicotiana tabacum HOM05D000425 ORTHO05D000373 4.0e-22 109.0 190 43.2
Duzib106G1167 Durio zibethinus HOM05D000425 ORTHO05D000373 5.2e-22 108.6 192 44.8
Oeu015082.1 Olea europaea HOM05D000425 ORTHO05D000373 6.8e-22 108.2 189 44.4
Atru.chr12.830 Acer truncatum HOM05D000425 ORTHO05D000373 8.9e-22 107.8 193 43.0
A04p29800 Brassica napus HOM05D000425 ORTHO05D000373 8.9e-22 107.8 194 42.3
BraA04t18442Z Brassica rapa HOM05D000425 ORTHO05D000373 8.9e-22 107.8 194 42.3
Lalb_Chr03g0036431 Lupinus albus HOM05D000425 ORTHO05D000373 1.2e-21 107.5 188 44.1
Potri.010G226000 Populus trichocarpa HOM05D000425 ORTHO05D000373 1.2e-21 107.5 194 43.3
BcaB02g09142 Brassica carinata HOM05D000425 ORTHO05D000373 1.5e-21 107.1 113 58.4
Prupe.2G209900 Prunus persica HOM05D000425 ORTHO05D000373 1.5e-21 107.1 190 41.6
arahy.Tifrunner.gnm1.ann1.BC87BJ Arachis hypogaea HOM05D000425 ORTHO05D000373 2.0e-21 106.7 186 43.0
TPR.G1950 Trifolium pratense HOM05D000425 ORTHO05D000373 2.0e-21 106.7 188 46.8
MELO3C012409.2 Cucumis melo HOM05D000425 ORTHO05D000373 2.6e-21 106.3 119 55.5
Thhalv10016467m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 2.6e-21 106.3 116 57.8
Rhsim03G0117100 Rhododendron simsii HOM05D000425 ORTHO05D000373 3.4e-21 105.9 113 57.5
arahy.Tifrunner.gnm1.ann1.N0MV1J Arachis hypogaea HOM05D000425 ORTHO05D000373 4.4e-21 105.5 186 42.5
CsaV3_5G036080 Cucumis sativus L. HOM05D000425 ORTHO05D000373 4.4e-21 105.5 119 55.5
AT2G39130 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 5.8e-21 105.1 192 41.7
MELO3C019816.2 Cucumis melo HOM05D000425 ORTHO05D000373 5.8e-21 105.1 189 42.9
Eucgr.J01066 Eucalyptus grandis HOM05D000425 ORTHO05D000373 5.8e-21 105.1 112 62.5
Ca_20268_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 7.5e-21 104.8 188 42.0
CANSAT56G4283 Cannabis sativa HOM05D000425 ORTHO05D000373 2.2e-20 103.2 203 39.4
Gohir.D10G212100 Gossypium hirsutum HOM05D000425 ORTHO05D000373 2.2e-20 103.2 191 41.9
Lj5g0024381 Lotus japonicus HOM05D000425 ORTHO05D000373 2.2e-20 103.2 111 60.4
Psat6g093880 Pisum sativum HOM05D000425 ORTHO05D000373 2.2e-20 103.2 184 41.8
CsaV3_6G036610 Cucumis sativus L. HOM05D000425 ORTHO05D000373 3.7e-20 102.4 189 41.8
FAN06G2715 Fragaria x ananassa HOM05D000425 ORTHO05D000373 3.7e-20 102.4 190 43.2
FAN06G3886 Fragaria x ananassa HOM05D000425 ORTHO05D000373 3.7e-20 102.4 190 43.2
Gohir.A10G204200 Gossypium hirsutum HOM05D000425 ORTHO05D000373 3.7e-20 102.4 190 41.1
Sed0017499 Sechium edule HOM05D000425 ORTHO05D000373 3.7e-20 102.4 118 55.1
DCAR_006422 Daucus carota HOM05D001165 ORTHO05D001347 4.9e-20 102.1 188 40.4
Medtr1g094620 Medicago truncatula HOM05D000425 ORTHO05D000373 1.1e-19 100.9 110 60.0
Nitab4.5_0000819g0070 Nicotiana tabacum HOM05D000425 ORTHO05D000373 1.4e-19 100.5 187 39.0
Lalb_Chr19g0129131 Lupinus albus HOM05D000425 ORTHO05D000373 3.2e-19 99.4 188 42.0
FvH4_7g18870 Fragaria vesca HOM05D000425 ORTHO05D000373 4.1e-19 99.0 189 42.9
ATR0680G312 Amborella trichopoda HOM05D000425 ORTHO05D000373 5.4e-19 98.6 192 41.1
SalBow4G1724 Salvia bowleyana HOM05D000425 ORTHO05D000373 9.2e-19 97.8 187 40.6
SalBow4G1926 Salvia bowleyana HOM05D000425 ORTHO05D000373 9.2e-19 97.8 187 40.6
Glyma.02G160900 Glycine max HOM05D000425 ORTHO05D000373 2.7e-18 96.3 189 42.3
Glyma.10G109500 Glycine max HOM05D000425 ORTHO05D000373 2.7e-18 96.3 189 42.9
Lalb_Chr01g0010441 Lupinus albus HOM05D000425 ORTHO05D000373 3.5e-18 95.9 188 41.5
VMungo0720G0628 Vigna mungo HOM05D000425 ORTHO05D000373 6.0e-18 95.1 184 41.3
DCAR_019091 Daucus carota HOM05D000425 ORTHO05D000373 1.7e-17 93.6 187 40.1
Actinidia06740 Actinidia chinensis HOM05D000425 ORTHO05D000373 2.3e-17 93.2 187 39.6
Sed0022938 Sechium edule HOM05D000425 ORTHO05D000373 5.1e-17 92.0 194 39.7
Phvul.007G242400 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 6.6e-17 91.7 110 53.6
ClCG08G007640 Citrullus lanatus HOM05D000425 ORTHO05D000373 1.5e-16 90.5 108 51.9
HPP92_022587 Vanilla planifolia HOM05D000425 ORTHO05D000373 1.9e-16 90.1 202 40.1
FAN10G2300 Fragaria x ananassa HOM05D000425 ORTHO05D000373 2.5e-16 89.7 188 39.9
Haze_16848 Corylus avellana HOM05D000425 ORTHO05D000373 3.3e-16 89.4 158 46.2
PGR142G2295 Punica granatum HOM05D000425 ORTHO05D000373 7.3e-16 88.2 192 39.6
CARHR164780 Cardamine hirsuta HOM05D000425 ORTHO05D000373 1.2e-15 87.4 188 37.8
Sp5g07590 Schrenkiella parvula HOM05D000425 ORTHO05D000373 1.2e-15 87.4 191 39.3
FAN03G1171 Fragaria x ananassa HOM05D000425 ORTHO05D000373 2.1e-15 86.7 199 40.7
arahy.Tifrunner.gnm1.ann1.K7T5R5 Arachis hypogaea HOM05D000425 ORTHO05D000373 2.8e-15 86.3 192 39.6
arahy.Tifrunner.gnm1.ann1.3H39ZY Arachis hypogaea HOM05D000425 ORTHO05D000373 4.7e-15 85.5 192 39.6
Thhalv10010278m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 4.7e-15 85.5 188 37.2
FAN01G1533 Fragaria x ananassa HOM05D000425 ORTHO05D000373 4.7e-15 85.5 193 38.3
AT3G54830 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 6.2e-15 85.1 190 36.8
BcaB01g00156 Brassica carinata HOM05D000425 ORTHO05D000373 8.1e-15 84.7 189 38.1
A09p47760 Brassica napus HOM05D000425 ORTHO05D000373 3.1e-14 82.8 189 38.6
BraA09t40234Z Brassica rapa HOM05D000425 ORTHO05D000373 3.1e-14 82.8 189 38.6
FAN10G2737 Fragaria x ananassa HOM05D000425 ORTHO05D000373 4.0e-14 82.4 193 39.9
Sabra10G0174200 Salix brachista HOM05D000425 ORTHO05D000373 4.0e-14 82.4 197 36.5
BolC8t50608H Brassica oleracea HOM05D000425 ORTHO05D000373 5.2e-14 82.0 189 38.6
BcaC07g39779 Brassica carinata HOM05D000425 ORTHO05D000373 6.8e-14 81.6 189 38.6
C08p29990 Brassica napus HOM05D000425 ORTHO05D000373 6.8e-14 81.6 189 38.6
unitig_26.g9458 Utricularia gibba HOM05D000425 ORTHO05D000373 8.9e-14 81.3 193 35.8
Psat6g181960 Pisum sativum HOM05D000425 ORTHO05D000373 1.5e-13 80.5 188 39.4
unitig_749.g13570 Utricularia gibba HOM05D000425 ORTHO05D000373 2.0e-13 80.1 190 36.3
Aa31sc66G20 Aethionema arabicum HOM05D000425 ORTHO05D000373 3.4e-13 79.3 190 35.3
EL10Ac7g16774 Beta vulgaris HOM05D000425 ORTHO05D000373 4.4e-13 79.0 84 54.8
BcaC02g12912 Brassica carinata HOM05D000425 ORTHO05D000373 7.6e-13 78.2 184 33.7
Migut.F01963 Erythranthe guttata HOM05D000425 ORTHO05D000373 9.9e-13 77.8 194 35.6
Duzib106G1504 Durio zibethinus HOM05D000009 ORTHO05D000008 3.7e-12 75.9 70 64.3
HPP92_005086 Vanilla planifolia HOM05D000425 ORTHO05D000373 3.7e-12 75.9 194 34.5
Ca_10549_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 4.9e-12 75.5 192 36.5
Lsat_1_v5_gn_4_127280 Lactuca sativa HOM05D000425 ORTHO05D000373 1.6e-10 70.5 145 35.2
PGR142G1800 Punica granatum HOM05D000425 ORTHO05D000373 1.6e-10 70.5 115 40.9
SEGI_21934 Sequoiadendron giganteum HOM05D000425 ORTHO05D000373 1.6e-10 70.5 106 41.5
Sed0010197 Sechium edule HOM05D000425 ORTHO05D000373 3.5e-10 69.3 110 44.5
Zm00001eb087950 Zea mays HOM05D000425 ORTHO05D000373 2.3e-09 66.6 118 40.7
Solyc03g063050.1 Solanum lycopersicum HOM05D000425 ORTHO05D033483 3.9e-09 65.9 110 37.3
Os02g0101000 Oryza sativa ssp. japonica HOM05D000425 ORTHO05D000373 2.1e-07 60.1 118 39.8
Zm00001eb278120 Zea mays HOM05D000425 ORTHO05D000373 1.8e-06 57.0 112 35.7
HanXRQChr08g0218601 Helianthus annuus HOM05D000425 ORTHO05D000373 3.1e-06 56.2 188 29.3


User provided reference genes

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