Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 9.5e-107 390.2 197 100.0
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 7.6e-56 221.1 201 61.2
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 7.9e-53 211.1 201 60.7
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.2e-48 197.2 203 55.2
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.2e-46 188.7 203 52.7
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 4.2e-46 188.7 201 54.2
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.6e-45 185.3 197 53.3
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.0e-44 184.1 196 51.5
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 5.1e-44 181.8 203 54.7
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 6.7e-44 181.4 154 62.3
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 3.3e-43 179.1 176 55.1
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 9.6e-43 177.6 159 55.3
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 9.6e-43 177.6 151 64.9
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.6e-42 176.8 194 50.0
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.1e-42 176.4 204 51.5
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 2.1e-42 176.4 158 59.5
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.1e-42 176.4 160 55.6
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.8e-42 176.0 198 50.5
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.8e-42 176.0 198 50.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.8e-42 176.0 149 61.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.8e-42 176.0 147 59.9
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 6.2e-42 174.9 180 52.8
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 8.2e-42 174.5 154 59.1
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 8.2e-42 174.5 154 59.1
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 8.2e-42 174.5 159 59.1
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.1e-41 174.1 154 58.4
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.1e-41 174.1 143 61.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 2.4e-41 172.9 189 50.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 4.0e-41 172.2 144 61.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 6.9e-41 171.4 178 52.8
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 9.0e-41 171.0 180 53.9
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.2e-40 170.6 177 53.7
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.5e-40 170.2 203 49.8
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 3.4e-40 169.1 140 60.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.0e-39 167.5 197 50.3
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.0e-39 167.5 178 52.8
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.3e-39 167.2 154 58.4
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.3e-39 167.2 154 55.8
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.2e-39 166.4 150 58.7
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.2e-39 166.4 152 56.6
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 2.9e-39 166.0 184 51.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 5.0e-39 165.2 184 48.4
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 5.0e-39 165.2 155 58.7
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 8.4e-39 164.5 155 58.1
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.9e-38 163.3 196 47.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.5e-38 162.9 173 51.4
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.5e-38 162.9 197 47.7
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 2.5e-38 162.9 180 53.3
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 3.2e-38 162.5 183 49.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 4.2e-38 162.2 127 62.2
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 5.5e-38 161.8 173 51.4
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 9.3e-38 161.0 180 50.0
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.2e-37 160.6 130 63.1
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 2.1e-37 159.8 140 58.6
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 3.5e-37 159.1 200 46.5
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 3.5e-37 159.1 134 61.9
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 6.1e-37 158.3 146 55.5
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.0e-36 157.5 168 53.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.0e-36 157.5 168 53.0
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.3e-36 157.1 176 48.9
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.8e-36 156.8 177 51.4
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.8e-36 156.8 149 54.4
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 3.9e-36 155.6 196 45.9
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 3.9e-36 155.6 129 61.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 5.1e-36 155.2 168 51.2
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 6.7e-36 154.8 115 66.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 8.7e-36 154.5 169 52.7
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 8.7e-36 154.5 169 52.7
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 8.7e-36 154.5 199 47.7
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 8.7e-36 154.5 179 49.2
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.1e-35 154.1 140 55.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.1e-35 154.1 199 47.2
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.5e-35 153.7 138 55.8
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.5e-35 153.7 159 55.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 2.5e-35 152.9 136 58.1
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.5e-35 152.9 136 58.8
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 4.3e-35 152.1 122 62.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 5.7e-35 151.8 124 60.5
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 7.4e-35 151.4 129 59.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.3e-34 150.6 172 50.0
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.6e-34 150.2 194 46.9
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.6e-34 150.2 197 45.7
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 4.8e-34 148.7 171 53.2
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 6.3e-34 148.3 136 57.4
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.8e-33 146.7 115 63.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 5.9e-32 141.7 194 44.3
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.4e-30 137.1 136 55.1
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 9.4e-30 134.4 170 48.8
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 9.4e-30 134.4 180 45.0
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 4.6e-29 132.1 146 45.9
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 3.9e-28 129.0 202 43.1
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 5.1e-28 128.6 157 45.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 8.8e-28 127.9 147 48.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 8.8e-28 127.9 147 48.3
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 6.3e-26 121.7 123 49.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.4e-25 120.6 132 47.7
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.5e-19 100.5 80 60.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.3e-19 99.4 84 58.3
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.3e-19 99.4 84 58.3
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.3e-18 97.4 80 58.8
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.6e-16 89.7 78 56.4
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.5e-14 84.0 79 55.7
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 3.2e-06 56.2 72 47.2
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.2e-06 56.2 44 59.1


User provided reference genes

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