Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 1.1e-98 363.2 178 100.0
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.1e-50 203.8 177 58.8
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 3.3e-50 202.2 176 58.5
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.5e-47 193.4 174 60.3
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 7.6e-47 191.0 217 50.2
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 2.4e-40 169.5 183 49.2
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 3.1e-40 169.1 177 50.8
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 4.0e-40 168.7 175 50.3
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 4.0e-40 168.7 177 51.4
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 6.9e-40 167.9 173 48.6
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 1.0e-38 164.1 177 50.3
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 1.7e-38 163.3 174 48.3
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 2.2e-38 162.9 177 50.3
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 2.9e-38 162.5 177 48.6
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.9e-38 162.5 177 50.3
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 6.5e-38 161.4 177 49.7
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 8.4e-38 161.0 171 47.4
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 1.1e-37 160.6 175 47.4
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.9e-37 159.8 182 49.5
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 2.5e-37 159.5 180 49.4
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 3.2e-37 159.1 171 45.6
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 7.1e-37 157.9 175 46.3
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.6e-36 156.8 213 42.3
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 1.6e-36 156.8 192 48.4
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 2.1e-36 156.4 178 46.1
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 2.1e-36 156.4 174 49.4
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 3.5e-36 155.6 177 47.5
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 3.5e-36 155.6 178 46.1
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 4.6e-36 155.2 186 48.9
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 4.6e-36 155.2 186 48.9
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 7.9e-36 154.5 171 47.4
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 7.9e-36 154.5 179 45.8
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.0e-35 154.1 177 47.5
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 1.0e-35 154.1 178 46.6
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.0e-35 154.1 179 46.4
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 1.8e-35 153.3 178 49.4
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 3.0e-35 152.5 173 48.6
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 5.1e-35 151.8 181 46.4
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 6.7e-35 151.4 179 45.8
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 8.7e-35 151.0 178 47.2
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 1.1e-34 150.6 181 49.2
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 2.5e-34 149.4 170 49.4
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 3.3e-34 149.1 202 44.6
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 4.3e-34 148.7 179 46.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 4.3e-34 148.7 177 48.0
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 9.7e-34 147.5 185 45.9
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.2e-33 146.4 175 45.1
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 2.2e-33 146.4 172 43.6
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 2.8e-33 146.0 185 45.4
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 3.7e-33 145.6 177 44.6
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.7e-33 145.6 209 44.5
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.1e-32 144.1 173 47.4
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 2.4e-32 142.9 180 47.8
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 2.4e-32 142.9 178 42.7
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 3.1e-32 142.5 190 43.7
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 5.3e-32 141.7 178 41.6
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 5.3e-32 141.7 178 41.6
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 6.9e-32 141.4 178 45.5
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 9.0e-32 141.0 176 44.3
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 1.5e-31 140.2 186 45.2
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 2.0e-31 139.8 182 44.0
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 2.0e-31 139.8 177 44.1
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 2.6e-31 139.4 175 47.4
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 2.6e-31 139.4 172 43.0
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 7.6e-31 137.9 184 42.9
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 7.6e-31 137.9 178 42.7
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 2.2e-30 136.3 181 43.1
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 2.9e-30 136.0 181 43.1
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 2.9e-30 136.0 181 43.1
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 5.0e-30 135.2 178 43.3
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 5.0e-30 135.2 181 45.9
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.1e-29 134.0 180 40.6
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 1.4e-29 133.7 187 43.3
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 1.4e-29 133.7 180 43.3
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 3.2e-29 132.5 187 41.2
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 4.2e-29 132.1 185 43.2
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 4.2e-29 132.1 185 43.2
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 7.2e-29 131.3 173 41.0
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 9.3e-29 131.0 192 39.6
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 7.9e-28 127.9 179 42.5
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 1.3e-27 127.1 189 39.7
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 2.3e-27 126.3 168 47.0
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 3.9e-27 125.6 165 43.0
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 8.8e-27 124.4 164 43.3
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 8.8e-27 124.4 181 40.3
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 1.1e-26 124.0 174 48.3
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 4.3e-26 122.1 192 38.0
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 8.2e-25 117.9 70 77.1
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 8.2e-25 117.9 169 46.7
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 3.1e-24 115.9 176 39.8
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 4.1e-24 115.5 66 77.3
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.1e-24 115.5 70 77.1
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 9.1e-24 114.4 109 53.2
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.2e-23 114.0 167 40.1
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 4.5e-23 112.1 171 36.8
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 1.3e-22 110.5 70 70.0
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.7e-22 110.2 170 41.8
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 2.5e-21 106.3 174 37.4
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 7.2e-21 104.8 154 38.3
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 2.1e-20 103.2 181 37.0
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 7.9e-20 101.3 70 67.1
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 3.0e-19 99.4 161 39.1
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 5.1e-19 98.6 64 71.9
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 8.8e-19 97.8 167 35.9
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 4.4e-18 95.5 180 36.1
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 4.4e-18 95.5 165 37.0
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 5.7e-18 95.1 67 62.7
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 1.7e-17 93.6 69 60.9
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 3.7e-17 92.4 178 37.1
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 6.9e-16 88.2 202 35.1
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 6.9e-16 88.2 202 35.1
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 9.1e-16 87.8 70 60.0
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 1.7e-14 83.6 163 35.0
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 2.2e-14 83.2 123 39.8
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.7e-12 76.3 70 57.1
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 4.7e-12 75.5 143 36.4
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 1.4e-11 73.9 75 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 1.8e-11 73.6 65 47.7
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 2.4e-08 63.2 65 44.6


User provided reference genes

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