Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03407 Selenicereus undatus HOM05D004081 ORTHO05D025646 6.7e-57 223.8 112 100.0
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 8.0e-18 94.0 91 61.5
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 2.7e-10 68.9 91 41.8
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 4.7e-10 68.2 48 64.6
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 8.8e-09 63.9 57 57.9
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 1.2e-08 63.5 49 59.2
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 1.5e-08 63.2 48 62.5
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 1.5e-08 63.2 49 61.2
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 1.5e-08 63.2 49 61.2
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 1.5e-08 63.2 47 63.8
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.6e-08 62.4 59 50.8
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 2.6e-08 62.4 49 59.2
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 2.6e-08 62.4 49 59.2
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 3.4e-08 62.0 49 61.2
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 3.4e-08 62.0 48 62.5
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 4.4e-08 61.6 47 63.8
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 7.5e-08 60.8 49 57.1
Oeu014640.1 Olea europaea HOM05D004081 ORTHO05D025646 1.3e-07 60.1 51 56.9
MD15G1096200 Malus domestica HOM05D004081 ORTHO05D025646 1.7e-07 59.7 48 58.3
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 2.2e-07 59.3 49 57.1
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.2e-07 59.3 49 53.1
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 2.8e-07 58.9 48 56.2
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 3.7e-07 58.5 65 47.7
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 3.7e-07 58.5 51 52.9
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 3.7e-07 58.5 63 46.0
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 4.8e-07 58.2 49 55.1
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 4.8e-07 58.2 59 47.5
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 6.3e-07 57.8 40 70.0
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 1.8e-06 56.2 56 50.0
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 2.4e-06 55.8 47 57.4
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 2.4e-06 55.8 48 54.2
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 3.1e-06 55.5 63 46.0
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 3.1e-06 55.5 48 52.1
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 3.1e-06 55.5 77 39.0
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 3.1e-06 55.5 41 63.4
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 4.1e-06 55.1 44 54.5
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 4.1e-06 55.1 54 57.4
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 5.4e-06 54.7 52 59.6
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 5.4e-06 54.7 48 56.2
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 7.0e-06 54.3 51 51.0
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 7.0e-06 54.3 50 52.0
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 9.1e-06 53.9 48 54.2
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 9.1e-06 53.9 48 52.1
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 9.1e-06 53.9 54 55.6
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 9.1e-06 53.9 54 55.6


User provided reference genes

Program Settings