Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03353 Selenicereus undatus HOM05D007010 ORTHO05D008591 1.6e-77 292.7 158 100.0
Hma1.2p1_0450F.1_g155640 Hydrangea macrophylla HOM05D007010 ORTHO05D008591 6.4e-21 104.8 127 58.3
Sc09g0009690 Simmondsia chinensis HOM05D007010 ORTHO05D008591 7.0e-20 101.3 124 54.0
AUR62009172 Chenopodium quinoa HOM05D007010 ORTHO05D008591 1.2e-19 100.5 156 46.8
Eucgr.C02362 Eucalyptus grandis HOM05D007010 ORTHO05D008591 1.6e-19 100.1 127 55.9
Thecc.09G051700 Theobroma cacao HOM05D007010 ORTHO05D008591 4.6e-19 98.6 165 44.2
Potri.018G056000 Populus trichocarpa HOM05D007010 ORTHO05D008591 1.3e-18 97.1 128 51.6
Nn8g38932 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.1e-17 94.0 121 52.1
Nn8g38936 Nelumbo nucifera HOM05D007010 ORTHO05D008591 1.1e-17 94.0 121 52.1
Glyma.07G198700 Glycine max HOM05D007010 ORTHO05D008591 2.5e-17 92.8 129 48.1
Atru.chr1.3280 Acer truncatum HOM05D007010 ORTHO05D008591 5.6e-17 91.7 132 46.2
Lalb_Chr05g0218511 Lupinus albus HOM05D007010 ORTHO05D008591 3.6e-16 89.0 127 49.6
Lj5g0011556 Lotus japonicus HOM05D007010 ORTHO05D008591 4.7e-16 88.6 127 48.0
Ciclev10009901m.g Citrus clementina HOM05D007010 ORTHO05D008591 6.2e-16 88.2 128 50.8
THA.LOC104811249 Tarenaya hassleriana HOM05D007010 ORTHO05D008591 1.1e-15 87.4 168 39.9
TWI63G1421 Tripterygium wilfordii HOM05D007010 ORTHO05D008591 1.1e-15 87.4 126 46.8
TPR.G16317 Trifolium pratense HOM05D007010 ORTHO05D008591 1.4e-15 87.0 135 48.1
CsaV3_4G035530 Cucumis sativus L. HOM05D007010 ORTHO05D008591 3.1e-15 85.9 144 42.4
Nn8g38933 Nelumbo nucifera HOM05D007010 ORTHO05D008591 6.8e-15 84.7 117 50.4
QL05p001142 Quercus lobata HOM05D007010 ORTHO05D008591 8.9e-15 84.3 90 57.8
Sp7g31830 Schrenkiella parvula HOM05D007010 ORTHO05D008591 1.2e-14 84.0 133 43.6
Sopen12g031840 Solanum pennellii HOM05D007010 ORTHO05D008591 1.5e-14 83.6 129 44.2
Oeu037327.1 Olea europaea HOM05D007010 ORTHO05D008591 2.0e-14 83.2 131 42.0
Sed0004842 Sechium edule HOM05D007010 ORTHO05D008591 2.0e-14 83.2 95 49.5
Solyc12g095940.1 Solanum lycopersicum HOM05D007010 ORTHO05D008591 2.0e-14 83.2 129 44.2
Gohir.A06G087901 Gossypium hirsutum HOM05D007010 ORTHO05D008591 2.6e-14 82.8 129 44.2
QL05p000846 Quercus lobata HOM05D007010 ORTHO05D008591 2.6e-14 82.8 91 57.1
Haze_03853 Corylus avellana HOM05D007010 ORTHO05D008591 3.4e-14 82.4 92 53.3
Sp6g31840 Schrenkiella parvula HOM05D007010 ORTHO05D008591 3.4e-14 82.4 130 46.2
CANSAT56G1710 Cannabis sativa HOM05D007010 ORTHO05D008591 7.5e-14 81.3 129 43.4
Phvul.002G230000 Phaseolus vulgaris HOM05D007010 ORTHO05D008591 7.5e-14 81.3 129 45.7
TAR383G0702 Trochodendron aralioides HOM05D007010 ORTHO05D008591 1.3e-13 80.5 125 45.6
Medtr4g088585 Medicago truncatula HOM05D007010 ORTHO05D008591 1.7e-13 80.1 131 41.2
Psat7g115760 Pisum sativum HOM05D007010 ORTHO05D008591 1.7e-13 80.1 127 42.5
PGSC0003DMG400029388 Solanum tuberosum HOM05D007010 ORTHO05D008591 2.2e-13 79.7 129 43.4
TAR497G0007 Trochodendron aralioides HOM05D007010 ORTHO05D008591 2.2e-13 79.7 126 50.0
ECA240G3686 Erigeron canadensis HOM05D007010 ORTHO05D008591 2.9e-13 79.3 145 43.4
Aa31LG3G15440 Aethionema arabicum HOM05D007010 ORTHO05D008591 4.9e-13 78.6 131 42.7
Cpa.g.sc7.196 Carica papaya HOM05D007010 ORTHO05D008591 8.3e-13 77.8 127 44.9
Lj4g0022512 Lotus japonicus HOM05D007010 ORTHO05D008591 8.3e-13 77.8 122 45.1
Manes.03G046700 Manihot esculenta HOM05D007010 ORTHO05D008591 1.4e-12 77.0 141 42.6
Gohir.D06G088700 Gossypium hirsutum HOM05D007010 ORTHO05D008591 2.4e-12 76.3 129 41.9
MD08G1044600 Malus domestica HOM05D007010 ORTHO05D008591 3.2e-12 75.9 154 38.3
CAN.G208.75 Capsicum annuum HOM05D007010 ORTHO05D008591 5.4e-12 75.1 127 43.3
Glyma.13G177700 Glycine max HOM05D007010 ORTHO05D008591 7.1e-12 74.7 125 43.2
Oeu018653.1 Olea europaea HOM05D007010 ORTHO05D008591 1.2e-11 73.9 131 42.0
Lj7P280T30 Lonicera japonica HOM05D007010 ORTHO05D008591 1.6e-11 73.6 126 40.5
EL10As8g23835 Beta vulgaris HOM05D007010 ORTHO05D008591 2.1e-11 73.2 151 43.0
Ca_18571_v3 Cicer arietinum L. HOM05D007010 ORTHO05D008591 2.1e-11 73.2 127 43.3
FAN24G3148 Fragaria x ananassa HOM05D007010 ORTHO05D008591 2.1e-11 73.2 143 39.2
PSO478G3947 Papaver somniferum HOM05D007010 ORTHO05D008591 2.1e-11 73.2 106 45.3
SalBow2G0398 Salvia bowleyana HOM05D007010 ORTHO05D008591 2.1e-11 73.2 135 40.7
SalBow2G1284 Salvia bowleyana HOM05D007010 ORTHO05D008591 2.1e-11 73.2 135 40.7
RcHm_v2.0_Chr6g0310541 Rosa chinensis HOM05D007010 ORTHO05D008591 2.7e-11 72.8 43 72.1
Potri.006G232200 Populus trichocarpa HOM05D007010 ORTHO05D008591 3.5e-11 72.4 146 43.2
PGR044G1826 Punica granatum HOM05D007010 ORTHO05D008591 3.5e-11 72.4 131 42.0
FvH4_2g32140 Fragaria vesca HOM05D007010 ORTHO05D008591 4.6e-11 72.0 176 36.9
MD15G1061800 Malus domestica HOM05D007010 ORTHO05D008591 4.6e-11 72.0 156 37.8
ClCG05G017750 Citrullus lanatus HOM05D007010 ORTHO05D008591 6.0e-11 71.6 98 49.0
VMungo0251G3434 Vigna mungo HOM05D007010 ORTHO05D008591 6.0e-11 71.6 132 42.4
Thhalv10027214m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 7.8e-11 71.2 127 42.5
SGA_v2.0_scaffold52G19071 Striga asiatica HOM05D007010 ORTHO05D008591 7.8e-11 71.2 136 42.6
Atru.chr7.2115 Acer truncatum HOM05D007010 ORTHO05D008591 1.0e-10 70.9 129 41.9
Thhalv10014970m.g Eutrema salsugineum HOM05D007010 ORTHO05D008591 1.7e-10 70.1 141 39.0
Sabra06G0180200 Salix brachista HOM05D007010 ORTHO05D008591 1.7e-10 70.1 134 44.0
Duzib168G1521 Durio zibethinus HOM05D007010 ORTHO05D008591 3.0e-10 69.3 96 46.9
vmacro00158 Vaccinium macrocarpon HOM05D007010 ORTHO05D008591 3.0e-10 69.3 112 48.2
BcaB03g11855 Brassica carinata HOM05D007010 ORTHO05D008591 3.9e-10 68.9 158 36.1
MBI06_g20720_MAGBIO Magnolia biondii HOM05D007010 ORTHO05D008591 6.6e-10 68.2 118 44.1
Lsat_1_v5_gn_9_89520 Lactuca sativa HOM05D007010 ORTHO05D008591 8.6e-10 67.8 152 40.1
Pp3c2_14930 Physcomitrium patens HOM05D007010 ORTHO05D008591 2.5e-09 66.2 147 36.1
Sabra06G0180800 Salix brachista HOM05D007010 ORTHO05D008591 2.5e-09 66.2 148 41.9
SalBow7G3522 Salvia bowleyana HOM05D007010 ORTHO05D008591 3.3e-09 65.9 133 39.1
Prupe.1G414500 Prunus persica HOM05D007010 ORTHO05D008591 4.3e-09 65.5 173 35.3
Dinv23425 Davidia involucrata HOM05D000575 ORTHO05D004448 7.3e-09 64.7 112 50.0
FAN10G4050 Fragaria x ananassa HOM05D007010 ORTHO05D008591 7.3e-09 64.7 39 69.2
Migut.L00284 Erythranthe guttata HOM05D007010 ORTHO05D008591 1.2e-08 63.9 145 33.8
BraA08t33674Z Brassica rapa HOM05D007010 ORTHO05D008591 2.1e-08 63.2 157 35.7
Aqoxy3G02885 Aquilegia oxysepala HOM05D007010 ORTHO05D008591 3.6e-08 62.4 66 50.0
BcaC01g00931 Brassica carinata HOM05D007010 ORTHO05D008591 3.6e-08 62.4 154 35.1
C03p86090 Brassica napus HOM05D007010 ORTHO05D008591 3.6e-08 62.4 154 35.1
BolC3t20897H Brassica oleracea HOM05D007010 ORTHO05D008591 3.6e-08 62.4 154 35.1
Dinv27969 Davidia involucrata HOM05D007010 ORTHO05D008591 3.6e-08 62.4 112 44.6
Cfa017938 Carpinus fangiana HOM05D007010 ORTHO05D008591 4.7e-08 62.0 124 39.5
A08p17130 Brassica napus HOM05D007010 ORTHO05D008591 6.2e-08 61.6 160 33.8
FAN27G2071 Fragaria x ananassa HOM05D007010 ORTHO05D008591 8.1e-08 61.2 126 39.7
Rhsim11G0045900 Rhododendron simsii HOM05D007010 ORTHO05D008591 8.1e-08 61.2 113 45.1
Zm00001eb054150 Zea mays HOM05D007010 ORTHO05D008591 8.1e-08 61.2 113 39.8
AUR62022053 Chenopodium quinoa HOM05D007010 ORTHO05D008591 1.1e-07 60.8 54 63.0
Mapoly0094s0032 Marchantia polymorpha HOM05D007010 ORTHO05D008591 1.8e-07 60.1 134 39.6
ATR0697G019 Amborella trichopoda HOM05D007010 ORTHO05D008591 5.2e-07 58.5 140 34.3
FAN20G1932 Fragaria x ananassa HOM05D007010 ORTHO05D008591 6.8e-07 58.2 132 40.2
HanXRQChr13g0410661 Helianthus annuus HOM05D007010 ORTHO05D008591 6.8e-07 58.2 132 38.6
SEGI_19332 Sequoiadendron giganteum HOM05D007010 ORTHO05D008591 6.8e-07 58.2 131 35.9
Cre09.g395325 Chlamydomonas reinhardtii HOM05D007010 ORTHO05D008591 7.6e-06 54.7 91 41.8


User provided reference genes

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