Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 2.0e-52 208.8 100 100.0
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.3e-40 169.5 100 79.0
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.6e-38 161.4 102 77.5
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 4.3e-31 137.9 98 68.4
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 4.3e-31 137.9 98 69.4
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.1e-29 133.3 95 67.4
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.1e-29 133.3 95 67.4
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 2.4e-29 132.1 95 67.4
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 4.0e-29 131.3 75 77.3
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 5.3e-29 131.0 95 65.3
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 5.3e-29 131.0 76 76.3
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.2e-28 129.8 91 65.9
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.5e-28 129.4 90 67.8
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.0e-28 129.0 74 77.0
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 3.4e-28 128.3 95 63.2
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 4.4e-28 127.9 94 62.8
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 4.4e-28 127.9 90 66.7
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 5.8e-28 127.5 94 62.8
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 7.6e-28 127.1 82 68.3
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.3e-27 126.3 84 67.9
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.2e-27 125.6 90 65.6
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 2.2e-27 125.6 90 65.6
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 2.9e-27 125.2 88 61.4
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 2.9e-27 125.2 106 64.2
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 3.8e-27 124.8 93 62.4
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.8e-27 124.8 70 74.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 3.8e-27 124.8 70 74.3
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 3.8e-27 124.8 91 63.7
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 1.4e-26 122.9 78 67.9
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.4e-26 122.9 70 72.9
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 1.4e-26 122.9 69 73.9
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 1.9e-26 122.5 91 61.5
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 1.9e-26 122.5 75 70.7
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 3.2e-26 121.7 107 56.1
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 5.4e-26 120.9 93 62.4
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 9.3e-26 120.2 73 68.5
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 9.3e-26 120.2 69 72.5
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 9.3e-26 120.2 73 71.2
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.2e-25 119.8 67 74.6
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.2e-25 119.8 73 71.2
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.6e-25 119.4 73 68.5
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.6e-25 119.4 103 58.3
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 2.1e-25 119.0 96 59.4
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 2.1e-25 119.0 74 68.9
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 2.1e-25 119.0 82 70.7
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 2.7e-25 118.6 76 68.4
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 2.7e-25 118.6 85 65.9
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 2.7e-25 118.6 81 65.4
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 3.5e-25 118.2 118 52.5
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 4.6e-25 117.9 76 67.1
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 4.6e-25 117.9 73 67.1
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 4.6e-25 117.9 73 67.1
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 6.0e-25 117.5 76 67.1
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 6.0e-25 117.5 76 67.1
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.0e-24 116.7 74 67.6
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 1.3e-24 116.3 94 58.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 1.3e-24 116.3 94 58.5
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.7e-24 115.9 93 59.1
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 1.7e-24 115.9 67 71.6
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 1.7e-24 115.9 67 71.6
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 3.9e-24 114.8 75 66.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 3.9e-24 114.8 60 76.7
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 5.1e-24 114.4 75 66.7
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 5.1e-24 114.4 76 64.5
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 8.7e-24 113.6 84 61.9
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 8.7e-24 113.6 72 68.1
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 8.7e-24 113.6 61 75.4
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.5e-23 112.8 77 63.6
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.5e-23 112.8 72 69.4
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.9e-23 112.5 72 69.4
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 2.5e-23 112.1 64 75.0
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.3e-23 111.7 68 77.9
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 3.3e-23 111.7 75 64.0
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 7.3e-23 110.5 77 62.3
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 1.6e-22 109.4 75 65.3
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.6e-22 109.4 75 66.7
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.6e-22 109.4 75 66.7
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 3.6e-22 108.2 75 64.0
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 4.8e-22 107.8 67 77.6
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 4.8e-22 107.8 69 65.2
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 6.2e-22 107.5 70 65.7
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 6.2e-22 107.5 58 77.6
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 1.4e-21 106.3 97 53.6
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.8e-21 105.9 75 62.7
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.1e-21 105.1 66 65.2
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 5.3e-21 104.4 70 65.7
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 9.0e-21 103.6 67 65.7
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 9.0e-21 103.6 68 69.1
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 9.0e-21 103.6 74 59.5
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.2e-20 103.2 78 56.4
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.5e-20 102.8 81 56.8
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 5.8e-20 100.9 59 74.6
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 5.8e-20 100.9 59 74.6
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 2.9e-19 98.6 82 53.7
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 6.4e-19 97.4 128 43.8
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 6.4e-19 97.4 77 54.5
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 9.3e-18 93.6 106 46.2
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 1.6e-17 92.8 58 67.2
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.0e-16 90.1 54 72.2
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 6.7e-16 87.4 66 54.5
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 6.7e-16 87.4 78 52.6
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 6.7e-16 87.4 78 52.6
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.5e-15 85.5 86 48.8
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 1.1e-13 80.1 62 58.1
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 5.3e-13 77.8 67 58.2
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 3.5e-09 65.1 65 43.1
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 7.9e-09 63.9 40 67.5
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.3e-08 63.2 64 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 1.9e-07 59.3 42 52.4


User provided reference genes

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