Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 3.0e-105 385.2 191 100.0
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.9e-75 286.2 190 73.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.6e-74 283.1 190 73.2
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 5.1e-73 278.1 178 77.5
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.8e-71 271.6 190 70.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.8e-71 271.6 190 70.0
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 4.0e-70 268.5 167 74.9
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 6.9e-70 267.7 191 70.2
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.2e-69 266.9 179 71.5
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.5e-69 265.0 170 72.4
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 4.5e-69 265.0 182 67.6
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 7.6e-69 264.2 179 70.9
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 2.2e-68 262.7 190 66.3
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.9e-68 262.3 168 72.6
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.4e-67 260.0 168 70.8
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.2e-67 258.8 170 71.2
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 3.2e-67 258.8 168 70.8
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 4.2e-67 258.5 191 64.4
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 4.2e-67 258.5 167 71.3
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 5.4e-67 258.1 168 70.8
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.4e-67 258.1 168 70.8
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 7.1e-67 257.7 170 71.2
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 7.1e-67 257.7 165 72.1
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 9.3e-67 257.3 181 66.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.2e-66 256.9 179 68.7
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 4.6e-66 255.0 167 69.5
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 4.6e-66 255.0 182 64.8
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 4.6e-66 255.0 191 64.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 6.0e-66 254.6 179 68.2
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 7.9e-66 254.2 191 63.9
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.0e-65 253.8 191 66.0
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.3e-65 253.4 180 68.9
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.3e-65 253.4 168 69.0
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.0e-65 252.3 194 62.4
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.0e-65 252.3 174 64.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.9e-65 251.9 169 69.8
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 6.7e-65 251.1 187 65.8
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 8.7e-65 250.8 194 62.4
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.5e-64 250.0 191 63.9
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.5e-64 250.0 191 63.9
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.9e-64 249.6 194 60.8
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 2.5e-64 249.2 168 67.9
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.3e-64 248.8 166 66.3
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.3e-64 248.8 192 62.5
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 4.3e-64 248.4 165 70.9
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.3e-63 246.9 190 61.6
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.3e-63 246.9 191 62.3
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.3e-63 246.9 212 57.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.1e-63 246.1 194 60.3
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.1e-63 246.1 166 66.3
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.8e-63 245.7 168 67.9
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 3.6e-63 245.4 168 67.3
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.1e-62 243.8 168 66.1
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.4e-62 243.4 198 63.1
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.4e-62 243.4 157 72.0
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 3.1e-62 242.3 168 67.3
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 3.1e-62 242.3 181 64.6
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.1e-62 242.3 166 65.1
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 6.9e-62 241.1 158 70.9
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 7.6e-61 237.7 190 59.5
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.7e-60 236.5 167 62.9
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 2.2e-60 236.1 169 65.7
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 4.9e-60 235.0 174 65.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 6.4e-60 234.6 169 67.5
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.4e-59 233.4 191 60.2
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 7.1e-59 231.1 148 72.3
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.7e-58 229.2 180 63.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.5e-58 228.8 158 68.4
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 7.9e-58 227.6 162 64.2
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.3e-57 226.9 165 65.5
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 1.8e-57 226.5 192 56.8
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-57 226.1 158 67.1
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.0e-57 225.7 167 66.5
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 3.9e-57 225.3 158 67.1
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.4e-54 216.9 138 73.9
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.8e-54 216.5 152 67.8
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.5e-53 211.8 269 45.0
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 5.8e-53 211.5 175 60.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.3e-52 210.3 161 61.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 7.9e-50 201.1 173 54.3
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.3e-49 200.3 128 73.4
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 7.4e-48 194.5 168 57.1
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 9.6e-48 194.1 161 55.3
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 4.8e-47 191.8 154 61.7
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 8.2e-47 191.0 129 72.1
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 6.9e-46 188.0 156 56.4
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 6.9e-46 188.0 158 57.0
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 4.2e-43 178.7 185 50.3
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 5.5e-43 178.3 125 68.8
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 7.2e-43 177.9 114 74.6
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 9.3e-43 177.6 158 53.8
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 3.6e-42 175.6 118 67.8
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.3e-41 172.9 119 65.5
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 6.7e-41 171.4 144 56.2
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.5e-40 170.2 154 57.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 3.7e-39 165.6 174 48.9
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.6e-37 159.5 148 52.7
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 5.9e-37 158.3 132 53.8
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.4e-35 153.7 124 60.5
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.1e-34 149.8 109 66.1
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.1e-34 149.8 96 74.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 1.0e-33 147.5 121 57.9
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 3.9e-33 145.6 162 48.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.9e-33 145.6 98 74.5
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.0e-32 143.3 101 67.3
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.6e-32 142.9 97 70.1
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 4.1e-30 135.6 88 72.7
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 3.8e-28 129.0 97 60.8
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.4e-25 120.6 131 52.7
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 5.2e-25 118.6 78 66.7
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.3e-24 115.9 75 76.0
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.7e-23 113.6 159 42.1
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.1e-19 100.9 84 56.0
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.4e-17 94.0 155 31.0
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.7e-16 87.8 49 85.7
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.8e-15 86.3 71 50.7
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 9.4e-11 71.2 49 67.3
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.7e-07 59.3 41 70.7


User provided reference genes

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