Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03270 Selenicereus undatus HOM05D003482 ORTHO05D004194 5.8e-80 300.8 151 100.0
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 4.3e-43 178.3 102 86.3
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 3.8e-39 165.2 107 73.8
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 1.9e-38 162.9 102 78.4
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 9.3e-38 160.6 102 76.5
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 2.7e-37 159.1 102 76.5
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 3.6e-37 158.7 102 76.5
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 4.6e-37 158.3 102 77.5
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 4.6e-37 158.3 102 77.5
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 4.6e-37 158.3 102 77.5
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 4.6e-37 158.3 127 63.0
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 4.6e-37 158.3 103 75.7
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 6.1e-37 157.9 107 74.8
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 6.1e-37 157.9 102 75.5
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 7.9e-37 157.5 123 65.9
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 7.9e-37 157.5 102 75.5
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 1.3e-36 156.8 102 76.5
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 1.3e-36 156.8 123 64.2
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 1.8e-36 156.4 102 73.5
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 1.8e-36 156.4 105 75.2
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 1.8e-36 156.4 102 76.5
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 1.8e-36 156.4 107 72.0
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 1.8e-36 156.4 102 74.5
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 2.3e-36 156.0 102 74.5
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 3.0e-36 155.6 107 72.0
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 3.0e-36 155.6 107 72.0
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 3.0e-36 155.6 102 73.5
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 3.9e-36 155.2 124 62.1
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 3.9e-36 155.2 124 62.1
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 3.9e-36 155.2 124 62.1
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 3.9e-36 155.2 124 62.1
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 3.9e-36 155.2 102 74.5
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 3.9e-36 155.2 102 75.5
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 5.1e-36 154.8 102 73.5
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 5.1e-36 154.8 107 71.0
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 6.7e-36 154.5 103 73.8
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 6.7e-36 154.5 135 60.7
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 6.7e-36 154.5 135 60.7
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 8.7e-36 154.1 105 73.3
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 8.7e-36 154.1 107 70.1
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 8.7e-36 154.1 102 73.5
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 1.5e-35 153.3 102 72.5
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 1.9e-35 152.9 102 76.5
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 1.9e-35 152.9 102 72.5
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 2.5e-35 152.5 105 72.4
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 2.5e-35 152.5 103 72.8
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.5e-35 152.5 102 72.5
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 3.3e-35 152.1 102 72.5
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 3.3e-35 152.1 102 72.5
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 3.3e-35 152.1 107 70.1
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 4.3e-35 151.8 102 73.5
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 4.3e-35 151.8 102 70.6
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 4.3e-35 151.8 102 70.6
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 7.4e-35 151.0 102 73.5
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 7.4e-35 151.0 102 73.5
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 7.4e-35 151.0 104 72.1
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 9.7e-35 150.6 102 72.5
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 9.7e-35 150.6 102 72.5
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 1.3e-34 150.2 102 71.6
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 1.6e-34 149.8 102 71.6
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 1.6e-34 149.8 102 72.5
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 2.8e-34 149.1 102 72.5
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 2.8e-34 149.1 103 75.7
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 2.8e-34 149.1 102 70.6
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 2.8e-34 149.1 102 71.6
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 2.8e-34 149.1 102 71.6
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 2.8e-34 149.1 134 59.7
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 3.7e-34 148.7 102 71.6
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 3.7e-34 148.7 102 71.6
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 3.7e-34 148.7 102 71.6
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 3.7e-34 148.7 102 70.6
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 4.8e-34 148.3 126 64.3
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 4.8e-34 148.3 107 67.3
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 4.8e-34 148.3 102 73.5
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 6.3e-34 147.9 127 61.4
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 6.3e-34 147.9 107 68.2
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 6.3e-34 147.9 107 67.3
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 8.2e-34 147.5 102 67.6
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 1.1e-33 147.1 102 70.6
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 1.4e-33 146.7 127 60.6
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 1.8e-33 146.4 102 68.6
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 1.8e-33 146.4 102 68.6
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.8e-33 146.4 142 57.0
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 2.4e-33 146.0 102 71.6
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 2.4e-33 146.0 107 66.4
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 2.4e-33 146.0 105 70.5
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.1e-33 145.6 102 71.6
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 3.1e-33 145.6 102 72.5
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 3.1e-33 145.6 102 68.6
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 4.1e-33 145.2 99 69.7
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 4.1e-33 145.2 107 66.4
TPR.G18873 Trifolium pratense HOM05D003482 ORTHO05D004194 4.1e-33 145.2 102 66.7
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 5.3e-33 144.8 102 71.6
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 5.3e-33 144.8 102 72.5
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 5.3e-33 144.8 102 71.6
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 9.1e-33 144.1 102 65.7
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 9.1e-33 144.1 102 68.6
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 1.2e-32 143.7 107 66.4
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 1.2e-32 143.7 102 70.6
SEGI_28596 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 5.9e-32 141.4 102 68.6
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 7.7e-32 141.0 102 67.6
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 7.7e-32 141.0 102 67.6
SEGI_04035 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 1.0e-31 140.6 99 69.7
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 2.2e-31 139.4 102 69.6
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 4.2e-30 135.2 91 73.6
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 5.5e-30 134.8 102 67.6
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 9.4e-30 134.0 107 63.6
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 9.4e-30 134.0 95 71.6
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 9.4e-30 134.0 95 71.6
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 2.1e-29 132.9 91 71.4
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 4.6e-29 131.7 102 63.7
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.8e-28 129.8 102 61.8
SEGI_26295 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 1.1e-27 127.1 99 63.6
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 2.2e-26 122.9 94 62.8
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 3.1e-25 119.0 107 54.2
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 5.3e-25 118.2 102 56.9
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 1.2e-24 117.1 102 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 4.5e-24 115.2 107 53.3
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.3e-23 113.6 79 67.1
SEGI_21411 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 6.5e-23 111.3 96 60.4
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 4.2e-22 108.6 102 52.9
SEGI_20762 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 3.3e-19 99.0 78 65.4
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.0e-16 89.7 60 70.0
Rhsim03G0037500 Rhododendron simsii HOM05D003482 ORTHO05D004194 2.8e-10 69.3 56 66.1
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 2.5e-06 56.2 32 84.4
CBR_g8367 Chara braunii HOM05D000290 ORTHO05D004630 7.2e-06 54.7 91 31.9


User provided reference genes

Program Settings