Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03203 Selenicereus undatus HOM05D003581 ORTHO05D004332 8.8e-176 620.2 309 100.0
AUR62002403 Chenopodium quinoa HOM05D003581 ORTHO05D004332 7.0e-72 275.0 391 43.0
AUR62023792 Chenopodium quinoa HOM05D003581 ORTHO05D004332 1.5e-69 267.3 359 45.1
Duzib151G0128 Durio zibethinus HOM05D003581 ORTHO05D004332 1.5e-69 267.3 322 48.4
Duzib268G0130 Durio zibethinus HOM05D003581 ORTHO05D004332 6.1e-68 261.9 356 45.2
GSVIVG01038144001 Vitis vinifera HOM05D003581 ORTHO05D004332 1.0e-67 261.2 392 41.8
QL10p055884 Quercus lobata HOM05D003581 ORTHO05D004332 8.8e-67 258.1 394 42.9
Nn7g37551 Nelumbo nucifera HOM05D003581 ORTHO05D004332 2.6e-66 256.5 382 42.7
Ca_18637_v3 Cicer arietinum L. HOM05D003581 ORTHO05D004332 1.3e-65 254.2 392 41.1
Hma1.2p1_0108F.1_g051730 Hydrangea macrophylla HOM05D003581 ORTHO05D004332 1.3e-65 254.2 397 42.3
TPR.G23544 Trifolium pratense HOM05D003581 ORTHO05D004332 1.3e-65 254.2 389 41.6
TWI63G1729 Tripterygium wilfordii HOM05D003581 ORTHO05D004332 1.3e-65 254.2 393 42.2
Dinv33206 Davidia involucrata HOM05D003581 ORTHO05D004332 2.8e-65 253.1 440 40.0
FvH4_3g33330 Fragaria vesca HOM05D003581 ORTHO05D004332 2.8e-65 253.1 396 41.2
TAR362G0335 Trochodendron aralioides HOM05D003581 ORTHO05D004332 1.1e-64 251.1 396 41.2
Actinidia11443 Actinidia chinensis HOM05D003581 ORTHO05D004332 1.4e-64 250.8 319 46.7
Cfa015269 Carpinus fangiana HOM05D003581 ORTHO05D004332 1.8e-64 250.4 394 40.9
Eucgr.L00003 Eucalyptus grandis HOM05D003581 ORTHO05D004332 1.8e-64 250.4 390 40.3
Ciclev10019435m.g Citrus clementina HOM05D003581 ORTHO05D004332 3.1e-64 249.6 434 39.2
FAN11G3774 Fragaria x ananassa HOM05D003581 ORTHO05D004332 3.1e-64 249.6 395 40.5
EL10Ac3g06090 Beta vulgaris HOM05D003581 ORTHO05D004332 4.1e-64 249.2 428 39.5
Sc19g0002230 Simmondsia chinensis HOM05D003581 ORTHO05D004332 5.3e-64 248.8 357 44.3
Atru.chr4.1420 Acer truncatum HOM05D003581 ORTHO05D004332 7.0e-64 248.4 394 41.1
Carub.0005s2638 Capsella rubella HOM05D003581 ORTHO05D004332 7.0e-64 248.4 407 41.0
Migut.G01176 Erythranthe guttata HOM05D003581 ORTHO05D004332 1.2e-63 247.7 396 41.2
Aa31LG10G13950 Aethionema arabicum HOM05D003581 ORTHO05D004332 1.6e-63 247.3 419 39.1
Aqoxy2G04153 Aquilegia oxysepala HOM05D003581 ORTHO05D004332 1.6e-63 247.3 397 41.8
FAN21G3444 Fragaria x ananassa HOM05D003581 ORTHO05D004332 2.0e-63 246.9 387 40.8
PSO837G0047 Papaver somniferum HOM05D003581 ORTHO05D004332 2.7e-63 246.5 393 41.2
Gohir.A02G009800 Gossypium hirsutum HOM05D003581 ORTHO05D004332 4.5e-63 245.7 388 39.9
Gohir.A10G143900 Gossypium hirsutum HOM05D003581 ORTHO05D004332 4.5e-63 245.7 372 41.1
Gohir.D02G010000 Gossypium hirsutum HOM05D003581 ORTHO05D004332 5.9e-63 245.4 388 39.7
Thecc.04G165500 Theobroma cacao HOM05D003581 ORTHO05D004332 5.9e-63 245.4 390 40.8
TWI15G0618 Tripterygium wilfordii HOM05D003581 ORTHO05D004332 5.9e-63 245.4 393 40.2
arahy.Tifrunner.gnm1.ann1.CYNM9M Arachis hypogaea HOM05D003581 ORTHO05D004332 1.0e-62 244.6 384 40.9
FAN25G3295 Fragaria x ananassa HOM05D003581 ORTHO05D004332 1.3e-62 244.2 387 40.3
AT3G59660 Arabidopsis thaliana HOM05D003581 ORTHO05D004332 2.2e-62 243.4 403 40.9
Gorai.005G012300 Gossypium raimondii HOM05D003581 ORTHO05D004332 2.2e-62 243.4 388 39.4
Hma1.2p1_0150F.1_g066840 Hydrangea macrophylla HOM05D003581 ORTHO05D004332 2.2e-62 243.4 382 40.8
Nitab4.5_0001586g0020 Nicotiana tabacum HOM05D003581 ORTHO05D004332 2.2e-62 243.4 424 38.2
BcaC08g44999 Brassica carinata HOM05D003581 ORTHO05D004332 2.9e-62 243.0 405 40.5
BolC6t37794H Brassica oleracea HOM05D003581 ORTHO05D004332 2.9e-62 243.0 405 40.5
COL.COLO4_06497 Corchorus olitorius HOM05D003581 ORTHO05D004332 2.9e-62 243.0 420 38.3
Gohir.D10G123100 Gossypium hirsutum HOM05D003581 ORTHO05D004332 2.9e-62 243.0 392 39.8
Gorai.011G135600 Gossypium raimondii HOM05D003581 ORTHO05D004332 2.9e-62 243.0 392 39.8
Lalb_Chr05g0218901 Lupinus albus HOM05D003581 ORTHO05D004332 2.9e-62 243.0 394 40.6
Glyma.02G137700 Glycine max HOM05D003581 ORTHO05D004332 3.8e-62 242.7 394 40.6
PSO017G3340 Papaver somniferum HOM05D003581 ORTHO05D004332 3.8e-62 242.7 370 41.4
ATR0743G267 Amborella trichopoda HOM05D003581 ORTHO05D004332 5.0e-62 242.3 379 39.3
VMungo0251G3355 Vigna mungo HOM05D003581 ORTHO05D004332 5.0e-62 242.3 382 41.1
Glyma.07G207700 Glycine max HOM05D003581 ORTHO05D004332 6.5e-62 241.9 392 40.6
Potri.013G127000 Populus trichocarpa HOM05D003581 ORTHO05D004332 6.5e-62 241.9 396 40.4
arahy.Tifrunner.gnm1.ann1.S0PZLW Arachis hypogaea HOM05D003581 ORTHO05D004332 8.5e-62 241.5 363 42.1
Cc03_g14130 Coffea canephora HOM05D003581 ORTHO05D004332 8.5e-62 241.5 373 41.3
Medtr4g087320 Medicago truncatula HOM05D003581 ORTHO05D004332 8.5e-62 241.5 392 39.8
Psat7g120160 Pisum sativum HOM05D003581 ORTHO05D004332 8.5e-62 241.5 390 40.5
SalBow3G1683 Salvia bowleyana HOM05D003581 ORTHO05D004332 8.5e-62 241.5 383 40.2
RcHm_v2.0_Chr5g0060731 Rosa chinensis HOM05D003581 ORTHO05D004332 1.1e-61 241.1 397 39.8
BcaB02g07454 Brassica carinata HOM05D003581 ORTHO05D004332 1.5e-61 240.7 403 40.4
CARHR170030 Cardamine hirsuta HOM05D003581 ORTHO05D004332 1.5e-61 240.7 416 39.4
Prupe.1G207300 Prunus persica HOM05D003581 ORTHO05D004332 1.5e-61 240.7 272 49.6
PGR042G0246 Punica granatum HOM05D003581 ORTHO05D004332 1.5e-61 240.7 393 39.9
Sopen06g018480 Solanum pennellii HOM05D003581 ORTHO05D004332 1.5e-61 240.7 383 39.9
CiPaw.02G100300 Carya illinoinensis HOM05D003581 ORTHO05D004332 1.9e-61 240.4 399 40.9
Lj4g0012121 Lotus japonicus HOM05D003581 ORTHO05D004332 1.9e-61 240.4 394 40.4
MD00G1149500 Malus domestica HOM05D003581 ORTHO05D004332 1.9e-61 240.4 396 39.9
Duzib212G0814 Durio zibethinus HOM05D003581 ORTHO05D004332 2.5e-61 240.0 396 38.9
Sp5g03520 Schrenkiella parvula HOM05D003581 ORTHO05D004332 2.5e-61 240.0 410 40.2
HPP92_012802 Vanilla planifolia HOM05D003581 ORTHO05D004332 2.5e-61 240.0 386 39.9
AL5G41730 Arabidopsis lyrata HOM05D003581 ORTHO05D004332 3.2e-61 239.6 388 41.0
Rhsim02G0084300 Rhododendron simsii HOM05D003581 ORTHO05D004332 3.2e-61 239.6 400 39.2
Solyc06g053420.4 Solanum lycopersicum HOM05D003581 ORTHO05D004332 3.2e-61 239.6 383 39.9
MBI11_g16039_MAGBIO Magnolia biondii HOM05D003581 ORTHO05D004332 4.2e-61 239.2 379 40.6
Manes.11G129000 Manihot esculenta HOM05D003581 ORTHO05D004332 4.2e-61 239.2 395 39.5
MSTRG.4302 Avicennia marina HOM05D003581 ORTHO05D004332 5.5e-61 238.8 388 40.2
CDE02G2835 Ceratophyllum demersum HOM05D003581 ORTHO05D004332 7.2e-61 238.4 372 40.6
CAN.G136.12 Capsicum annuum HOM05D003581 ORTHO05D004332 2.7e-60 236.5 377 39.5
Thhalv10005851m.g Eutrema salsugineum HOM05D003581 ORTHO05D004332 2.7e-60 236.5 402 39.8
C08p34660 Brassica napus HOM05D003581 ORTHO05D004332 4.7e-60 235.7 411 39.4
ECA248G0552 Erigeron canadensis HOM05D003581 ORTHO05D004332 4.7e-60 235.7 374 40.4
Peaxi162Scf00075g01320 Petunia axillaris HOM05D003581 ORTHO05D004332 4.7e-60 235.7 393 40.2
MSTRG.9734 Avicennia marina HOM05D003581 ORTHO05D004332 6.1e-60 235.3 355 42.0
Oeu015721.1 Olea europaea HOM05D003581 ORTHO05D004332 1.0e-59 234.6 302 46.7
BcaC07g40497 Brassica carinata HOM05D003581 ORTHO05D004332 2.3e-59 233.4 411 39.2
C06p26310 Brassica napus HOM05D003581 ORTHO05D004332 3.0e-59 233.0 431 38.3
HanXRQChr02g0059151 Helianthus annuus HOM05D003581 ORTHO05D004332 4.0e-59 232.6 371 39.4
BolC8t51068H Brassica oleracea HOM05D003581 ORTHO05D004332 5.2e-59 232.3 397 39.5
Haze_01360 Corylus avellana HOM05D003581 ORTHO05D004332 5.2e-59 232.3 294 45.9
A07p24730 Brassica napus HOM05D003581 ORTHO05D004332 6.8e-59 231.9 428 37.9
A09p51980 Brassica napus HOM05D003581 ORTHO05D004332 6.8e-59 231.9 424 38.0
BraA09t40631Z Brassica rapa HOM05D003581 ORTHO05D004332 8.8e-59 231.5 397 39.0
Ciclev10019432m.g Citrus clementina HOM05D003581 ORTHO05D004332 1.2e-58 231.1 434 37.6
MELO3C017762.2 Cucumis melo HOM05D003581 ORTHO05D004332 1.5e-58 230.7 390 40.0
Ciclev10019423m.g Citrus clementina HOM05D003581 ORTHO05D004332 4.4e-58 229.2 437 37.5
CsaV3_4G002790 Cucumis sativus L. HOM05D003581 ORTHO05D004332 5.7e-58 228.8 434 38.0
Lalb_Chr16g0384431 Lupinus albus HOM05D003581 ORTHO05D004332 5.7e-58 228.8 395 38.7
Os09g0516900 Oryza sativa ssp. japonica HOM05D003581 ORTHO05D004332 9.8e-58 228.0 385 39.2
Oeu050335.1 Olea europaea HOM05D003581 ORTHO05D004332 1.7e-57 227.3 385 40.3
Solyc08g014150.4 Solanum lycopersicum HOM05D003581 ORTHO05D004332 1.7e-57 227.3 383 38.9
HanXRQChr11g0343141 Helianthus annuus HOM05D003581 ORTHO05D004332 2.2e-57 226.9 377 38.5
Sopen08g005080 Solanum pennellii HOM05D003581 ORTHO05D004332 2.8e-57 226.5 383 38.6
Dinv07056 Davidia involucrata HOM05D003581 ORTHO05D004332 3.7e-57 226.1 313 44.1
THA.LOC104817844 Tarenaya hassleriana HOM05D003581 ORTHO05D004332 4.8e-57 225.7 385 39.2
BraA07t30118Z Brassica rapa HOM05D003581 ORTHO05D004332 1.8e-56 223.8 298 44.6
Nitab4.5_0000013g0560 Nicotiana tabacum HOM05D003581 ORTHO05D004332 1.2e-55 221.1 303 44.6
Zm00001eb318620 Zea mays HOM05D003581 ORTHO05D004332 1.2e-55 221.1 425 36.9
Sed0001548 Sechium edule HOM05D003581 ORTHO05D004332 1.6e-55 220.7 431 36.7
Peaxi162Scf00568g00013 Petunia axillaris HOM05D003581 ORTHO05D004332 2.0e-55 220.3 289 44.6
Sed0016715 Sechium edule HOM05D003581 ORTHO05D004332 2.0e-55 220.3 390 38.2
Zm00001eb102830 Zea mays HOM05D003581 ORTHO05D004332 2.0e-55 220.3 379 39.1
Nitab4.5_0001411g0030 Nicotiana tabacum HOM05D003581 ORTHO05D004332 2.7e-55 219.9 296 44.3
FAN16G1590 Fragaria x ananassa HOM05D003581 ORTHO05D004332 3.5e-55 219.5 458 34.5
Lju470A15G16 Lonicera japonica HOM05D003581 ORTHO05D004332 3.5e-55 219.5 323 42.4
Lsat_1_v5_gn_1_74961 Lactuca sativa HOM05D003581 ORTHO05D004332 4.5e-55 219.2 285 43.9
unitig_747.g21694 Utricularia gibba HOM05D003581 ORTHO05D004332 5.9e-55 218.8 330 42.1
SEGI_00445 Sequoiadendron giganteum HOM05D003581 ORTHO05D004332 7.7e-55 218.4 387 37.0
Oeu016612.2 Olea europaea HOM05D003581 ORTHO05D004332 2.9e-54 216.5 394 37.8
CSS0022611 Camellia sinensis var. sinensis HOM05D003581 ORTHO05D004332 3.8e-54 216.1 376 38.0
Phvul.003G296800 Phaseolus vulgaris HOM05D003581 ORTHO05D004332 6.5e-54 215.3 317 42.6
Peaxi162Scf00180g00011 Petunia axillaris HOM05D003581 ORTHO05D004332 1.1e-53 214.5 297 42.8
Nitab4.5_0024222g0010 Nicotiana tabacum HOM05D003581 ORTHO05D004332 1.9e-53 213.8 299 42.1
Lsat_1_v5_gn_6_65760 Lactuca sativa HOM05D003581 ORTHO05D004332 2.7e-52 209.9 283 42.8
Lj6A212G5 Lonicera japonica HOM05D003581 ORTHO05D004332 4.7e-52 209.1 356 38.8
Sabra13G0106000 Salix brachista HOM05D003581 ORTHO05D004332 5.2e-51 205.7 477 33.5
SGA_v2.0_scaffold283G46956 Striga asiatica HOM05D003581 ORTHO05D004332 2.2e-49 200.3 355 40.3
ClCG07G015200 Citrullus lanatus HOM05D003581 ORTHO05D004332 2.4e-48 196.8 359 39.3
Mapoly0029s0087 Marchantia polymorpha HOM05D003581 ORTHO05D004332 3.3e-45 186.4 394 32.5
FAN21G2715 Fragaria x ananassa HOM05D003581 ORTHO05D004332 4.7e-44 182.6 249 45.4
DCAR_027523 Daucus carota HOM05D003581 ORTHO05D004332 6.1e-44 182.2 294 39.1
Actinidia02585 Actinidia chinensis HOM05D003581 ORTHO05D004332 1.8e-43 180.6 283 39.6
AagrBONN_evm.TU.Sc2ySwM_228.999 Anthoceros agrestis HOM05D003581 ORTHO05D004332 6.8e-43 178.7 287 38.0
Ah.13g073460 Amaranthus hybridus HOM05D003581 ORTHO05D004332 1.2e-42 177.9 370 37.0
MSTRG.22033 Avicennia marina HOM05D003581 ORTHO05D004332 1.2e-42 177.9 431 32.7
DCAR_005472 Daucus carota HOM05D003581 ORTHO05D004332 3.7e-41 172.9 280 38.2
arahy.Tifrunner.gnm1.ann1.QCV2L4 Arachis hypogaea HOM05D003581 ORTHO05D004332 8.3e-41 171.8 347 34.3
CBR_g46857 Chara braunii HOM05D003581 ORTHO05D004332 1.1e-40 171.4 464 28.7
Zm00001eb246670 Zea mays HOM05D003581 ORTHO05D004332 3.2e-40 169.9 292 36.0
Pp3c15_5890 Physcomitrium patens HOM05D003581 ORTHO05D004332 3.9e-38 162.9 449 29.2
Migut.N03065 Erythranthe guttata HOM05D003581 ORTHO05D004332 1.6e-36 157.5 317 33.8
SalBow6G2049 Salvia bowleyana HOM05D003581 ORTHO05D004332 2.1e-36 157.1 340 33.2
Oeu015722.1 Olea europaea HOM05D003581 ORTHO05D004332 1.9e-32 144.1 150 52.7
Cpa.g.sc9.366 Carica papaya HOM05D003581 ORTHO05D004332 5.4e-32 142.5 186 44.1
Rhsim09G0009900 Rhododendron simsii HOM05D003581 ORTHO05D004332 3.5e-31 139.8 320 32.8
Gohir.D02G010400 Gossypium hirsutum HOM05D000101 ORTHO05D002559 7.8e-31 138.7 142 49.3
PGSC0003DMG400014635 Solanum tuberosum HOM05D003581 ORTHO05D004332 3.0e-30 136.7 264 34.8
arahy.Tifrunner.gnm1.ann1.KL9X3Y Arachis hypogaea HOM05D003581 ORTHO05D004332 3.9e-30 136.3 266 34.6
SMO358G0294 Selaginella moellendorffii HOM05D003581 ORTHO05D004332 2.5e-29 133.7 330 28.5
SEGI_09569 Sequoiadendron giganteum HOM05D003581 ORTHO05D004332 4.3e-29 132.9 157 47.1
vmacro00696 Vaccinium macrocarpon HOM05D003581 ORTHO05D004332 3.1e-27 126.7 217 36.4
Lj6A223G7 Lonicera japonica HOM05D003581 ORTHO05D004332 2.0e-26 124.0 69 79.7
FAN02G4325 Fragaria x ananassa HOM05D003581 ORTHO05D004332 7.5e-26 122.1 70 75.7
FAN03G1615 Fragaria x ananassa HOM05D003581 ORTHO05D004332 2.9e-25 120.2 69 75.4
CiPaw.01G170500 Carya illinoinensis HOM05D003581 ORTHO05D004332 3.7e-25 119.8 142 46.5
FAN08G0117 Fragaria x ananassa HOM05D003581 ORTHO05D004332 3.7e-25 119.8 67 77.6
CAN.G759.9 Capsicum annuum HOM05D003581 ORTHO05D004332 1.4e-24 117.9 71 78.9
Ciclev10020241m.g Citrus clementina HOM05D003581 ORTHO05D004332 2.7e-23 113.6 69 71.0
CAN.G759.10 Capsicum annuum HOM05D003581 ORTHO05D004332 6.6e-22 109.0 65 70.8
MELO3C025672.2 Cucumis melo HOM05D003581 ORTHO05D004332 1.1e-21 108.2 84 63.1
HanXRQChr08g0224081 Helianthus annuus HOM05D003581 ORTHO05D004332 2.5e-21 107.1 71 67.6
Glyma.02G137500 Glycine max HOM05D003581 ORTHO05D004332 5.6e-21 105.9 156 44.2
AL5G41680 Arabidopsis lyrata HOM05D003581 ORTHO05D004332 8.9e-19 98.6 125 47.2
Cpa.g.sc9.367 Carica papaya HOM05D003581 ORTHO05D004332 3.8e-17 93.2 128 45.3
HanXRQChr15g0474821 Helianthus annuus HOM05D003581 ORTHO05D004332 2.4e-16 90.5 119 42.0
MELO3C031715.2 Cucumis melo HOM05D003581 ORTHO05D004332 3.2e-16 90.1 64 67.2
MELO3C026654.2 Cucumis melo HOM05D003581 ORTHO05D004332 3.5e-15 86.7 53 73.6
Phvul.003G296600 Phaseolus vulgaris HOM05D003581 ORTHO05D004332 6.0e-15 85.9 199 35.2
CiPaw.01G170400 Carya illinoinensis HOM05D003581 ORTHO05D004332 7.8e-15 85.5 127 43.3
VMungo0251G0270 Vigna mungo HOM05D003581 ORTHO05D004332 7.8e-15 85.5 186 33.3
Glyma.07G207902 Glycine max HOM05D003581 ORTHO05D004332 4.7e-12 76.3 73 57.5
Cpa.g.sc9.365 Carica papaya HOM05D003581 ORTHO05D004332 1.3e-06 58.2 61 54.1


User provided reference genes

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