Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 5.2e-84 314.3 155 100.0
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.6e-75 285.4 155 87.1
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 2.9e-74 282.0 155 86.5
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 1.4e-73 279.6 153 86.9
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 1.4e-68 263.1 154 78.6
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 3.2e-65 251.9 146 81.5
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 9.2e-65 250.4 152 76.3
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 4.6e-64 248.1 151 76.8
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 6.0e-64 247.7 151 75.5
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 6.0e-64 247.7 152 76.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 1.7e-63 246.1 154 74.0
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.7e-63 246.1 154 74.7
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 3.9e-63 245.0 157 74.5
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 3.9e-63 245.0 150 76.0
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 5.1e-63 244.6 146 77.4
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 8.6e-63 243.8 152 74.3
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 8.6e-63 243.8 157 72.0
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 8.6e-63 243.8 153 74.5
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 8.6e-63 243.8 158 75.3
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 8.6e-63 243.8 148 75.0
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 1.9e-62 242.7 151 72.8
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 1.9e-62 242.7 138 81.9
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 2.5e-62 242.3 150 73.3
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 2.5e-62 242.3 152 73.0
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 2.5e-62 242.3 141 82.3
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 3.3e-62 241.9 152 71.7
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 3.3e-62 241.9 150 72.7
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.3e-62 241.9 155 74.8
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 3.3e-62 241.9 145 77.9
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 4.3e-62 241.5 141 80.9
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 4.3e-62 241.5 141 80.9
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 4.3e-62 241.5 152 74.3
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 5.6e-62 241.1 146 76.7
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 5.6e-62 241.1 147 75.5
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 9.5e-62 240.4 150 72.0
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 9.5e-62 240.4 150 72.0
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 1.2e-61 240.0 156 73.7
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 1.2e-61 240.0 149 74.5
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.6e-61 239.6 158 72.2
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 1.6e-61 239.6 146 75.3
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.6e-61 239.6 155 72.3
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 2.1e-61 239.2 132 81.8
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.1e-61 239.2 153 74.5
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.1e-61 239.2 153 74.5
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 2.1e-61 239.2 159 69.8
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 2.8e-61 238.8 154 72.1
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 2.8e-61 238.8 154 72.1
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 2.8e-61 238.8 154 72.1
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 4.7e-61 238.0 153 71.2
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 4.7e-61 238.0 153 73.2
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 4.7e-61 238.0 153 69.3
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 4.7e-61 238.0 140 79.3
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 4.7e-61 238.0 153 73.2
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 6.2e-61 237.7 147 73.5
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 6.2e-61 237.7 154 72.1
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 6.2e-61 237.7 159 71.1
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 6.2e-61 237.7 151 72.8
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 6.2e-61 237.7 158 71.5
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 6.2e-61 237.7 154 72.1
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 8.1e-61 237.3 153 71.2
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 8.1e-61 237.3 150 72.7
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 8.1e-61 237.3 150 72.7
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 8.1e-61 237.3 150 72.7
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 8.1e-61 237.3 150 72.7
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 8.1e-61 237.3 150 72.7
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 1.1e-60 236.9 151 72.2
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 1.8e-60 236.1 148 73.0
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 2.3e-60 235.7 150 72.0
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 2.3e-60 235.7 154 73.4
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 3.1e-60 235.3 149 72.5
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 3.1e-60 235.3 156 70.5
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 3.1e-60 235.3 156 70.5
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 3.1e-60 235.3 158 70.3
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 3.1e-60 235.3 148 71.6
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 3.1e-60 235.3 155 70.3
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 4.0e-60 235.0 137 76.6
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 4.0e-60 235.0 142 74.6
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 5.2e-60 234.6 141 78.0
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 5.2e-60 234.6 156 71.8
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.2e-60 234.6 148 72.3
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 6.8e-60 234.2 154 70.1
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.2e-59 233.4 159 69.2
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 1.2e-59 233.4 153 70.6
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 1.2e-59 233.4 148 72.3
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 1.5e-59 233.0 149 72.5
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.0e-59 232.6 159 69.2
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 2.6e-59 232.3 152 69.7
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 3.4e-59 231.9 149 71.8
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 4.4e-59 231.5 151 71.5
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 5.8e-59 231.1 155 69.0
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 9.9e-59 230.3 151 68.9
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 9.9e-59 230.3 154 68.8
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 1.3e-58 229.9 151 68.9
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 1.3e-58 229.9 151 68.9
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 1.7e-58 229.6 151 68.9
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 2.9e-58 228.8 152 68.4
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 3.7e-58 228.4 150 71.3
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 2.4e-57 225.7 152 67.1
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 3.2e-57 225.3 153 68.6
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 9.2e-57 223.8 146 68.5
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 2.7e-56 222.2 155 69.7
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 4.6e-56 221.5 147 69.4
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 6.0e-56 221.1 147 69.4
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.6e-54 214.5 206 54.4
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.1e-53 210.7 201 54.2
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.1e-53 210.7 211 52.6
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 1.4e-52 209.9 142 64.8
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 4.0e-52 208.4 171 58.5
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 5.2e-52 208.0 160 61.9
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 5.2e-52 208.0 145 64.8
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 8.9e-52 207.2 119 82.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 1.2e-51 206.8 146 63.0
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 2.1e-45 186.0 158 62.0
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 4.4e-43 178.3 128 60.9
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 1.7e-42 176.4 103 77.7
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 2.9e-42 175.6 136 55.9
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 8.4e-42 174.1 150 58.0
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 1.9e-41 172.9 97 79.4
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 7.9e-32 141.0 83 75.9
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 4.2e-25 118.6 83 65.1
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 4.3e-22 108.6 72 69.4
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 7.9e-16 87.8 148 33.8
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 1.9e-14 83.2 73 56.2
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 6.3e-13 78.2 124 33.9
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 2.3e-07 59.7 41 65.9


User provided reference genes

Program Settings