Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.1e-152 543.5 332 100.0
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 3.5e-114 415.6 330 77.6
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.8e-111 406.0 330 77.6
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.0e-109 399.8 330 74.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.5e-107 392.9 332 68.1
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 3.3e-104 382.5 331 65.3
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 9.7e-104 380.9 330 68.2
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.4e-102 377.1 326 67.5
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 5.3e-102 375.2 332 66.3
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 6.5e-100 368.2 326 67.2
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.5e-99 366.3 330 65.8
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 4.2e-99 365.5 322 65.2
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.6e-98 363.6 332 70.5
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 3.6e-98 362.5 332 65.7
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 6.7e-97 358.2 324 69.8
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 6.7e-97 358.2 324 69.8
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 6.7e-97 358.2 325 63.1
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 8.8e-97 357.8 332 70.5
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.2e-95 353.2 327 63.0
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 2.2e-95 353.2 331 63.7
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 1.1e-94 350.9 328 66.2
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.8e-94 350.1 327 63.9
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 2.4e-94 349.7 328 63.4
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 3.1e-94 349.4 328 69.2
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 4.1e-94 349.0 326 70.6
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 6.9e-94 348.2 332 63.3
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.0e-93 346.7 328 68.9
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.7e-92 343.6 321 62.3
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 3.8e-92 342.4 323 61.0
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.8e-92 342.4 322 60.2
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 5.0e-92 342.0 331 62.5
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.9e-91 340.1 320 69.1
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 2.5e-91 339.7 327 61.2
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.2e-91 339.0 332 62.3
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.2e-90 337.4 326 69.0
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 4.7e-90 335.5 326 66.3
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 6.1e-90 335.1 321 61.1
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 6.1e-90 335.1 324 62.3
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.0e-90 334.7 332 61.7
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.0e-89 334.3 327 62.1
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.0e-89 334.3 353 56.1
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 1.8e-89 333.6 332 61.7
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.8e-89 333.6 319 63.6
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.9e-89 332.4 327 59.6
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 5.2e-89 332.0 323 65.3
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 6.7e-89 331.6 322 62.4
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 6.7e-89 331.6 329 59.9
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.1e-88 330.9 325 60.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 2.0e-88 330.1 324 61.7
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.0e-88 330.1 323 55.4
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.6e-88 329.7 337 59.1
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.7e-87 327.0 324 59.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.2e-87 326.6 320 61.2
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 2.2e-87 326.6 353 55.0
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.8e-87 326.2 324 61.4
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 2.8e-87 326.2 334 65.3
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 3.7e-87 325.9 318 60.4
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.4e-86 323.9 355 53.2
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 1.8e-86 323.6 324 61.4
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 2.4e-86 323.2 329 60.8
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.4e-86 323.2 329 57.4
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.6e-85 320.5 327 60.6
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 3.5e-85 319.3 324 60.5
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-84 317.0 327 59.3
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 2.9e-84 316.2 321 62.6
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 5.0e-84 315.5 322 59.3
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 5.0e-84 315.5 323 64.4
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 5.0e-84 315.5 334 57.5
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.5e-83 313.9 325 64.6
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 4.2e-83 312.4 333 58.9
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 5.5e-83 312.0 324 59.9
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 7.2e-83 311.6 347 48.1
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.2e-82 310.8 327 57.5
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.6e-82 310.5 325 64.3
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.1e-82 310.1 322 59.3
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 2.7e-82 309.7 324 59.9
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 4.7e-82 308.9 328 57.9
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 3.0e-81 306.2 325 62.8
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 5.2e-81 305.4 324 57.4
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.7e-81 305.1 321 61.4
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.6e-80 303.1 325 57.2
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 7.5e-80 301.6 333 60.1
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 9.7e-80 301.2 324 63.6
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 9.7e-80 301.2 324 63.6
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.3e-79 300.8 324 56.8
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 4.8e-79 298.9 324 57.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 2.4e-78 296.6 328 57.0
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 2.4e-78 296.6 329 56.2
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 4.1e-78 295.8 324 62.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.7e-77 293.1 327 56.9
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 5.0e-76 288.9 324 63.3
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 5.5e-75 285.4 335 52.2
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 7.0e-70 268.5 282 65.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.0e-68 264.6 286 59.8
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 9.5e-67 258.1 326 59.2
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.5e-64 250.8 320 54.1
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 4.1e-62 242.7 316 52.2
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 1.2e-61 241.1 212 66.0
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 2.7e-61 240.0 320 56.6
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.3e-52 211.1 174 55.2
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.3e-52 210.3 212 49.5
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 6.2e-50 202.2 167 55.1
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.3e-47 194.5 204 47.1
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.7e-47 194.1 268 40.7
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.4e-46 189.1 199 47.2
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.6e-45 187.6 170 54.1
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.3e-44 183.7 139 59.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.1e-43 181.4 170 50.6
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.3e-43 179.9 170 53.5
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 6.2e-42 175.6 169 50.9
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.3e-39 167.9 170 47.6
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.7e-39 166.4 169 59.2
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.4e-38 163.7 210 68.6
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 4.6e-37 159.5 339 45.7
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.4e-33 147.1 163 49.1
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-31 141.0 101 68.3
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.9e-30 137.5 110 60.9
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.6e-26 123.2 78 75.6
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 8.1e-26 122.1 91 65.9
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 4.2e-22 109.8 87 60.9
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 9.3e-22 108.6 171 44.4
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 3.5e-21 106.7 72 69.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.6e-21 106.3 107 47.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 6.6e-20 102.4 65 70.8
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.9e-19 100.9 354 27.7
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.5e-19 100.5 265 44.2
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 2.7e-13 80.5 123 40.7
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.8e-10 69.7 54 61.1
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 4.2e-06 56.6 44 63.6


User provided reference genes

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