Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 2.2e-100 369.4 253 100.0
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 2.5e-35 153.3 255 60.8
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 5.6e-35 152.1 282 54.3
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.2e-34 151.0 253 60.5
Hund11988 Selenicereus undatus HOM05D007634 ORTHO05D004310 8.0e-34 148.3 258 61.6
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 7.0e-30 135.2 253 58.9
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 1.9e-27 127.1 253 47.8
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 2.3e-25 120.2 253 54.5
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 5.6e-19 99.0 259 52.9
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 7.3e-19 98.6 255 52.5
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 4.0e-17 92.8 261 52.5
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 4.0e-17 92.8 252 52.4
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.5e-16 90.9 263 47.9
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 1.5e-16 90.9 270 47.0
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 1.3e-15 87.8 270 46.7
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 1.3e-15 87.8 259 51.7
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 3.2e-14 83.2 88 50.0
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 7.1e-14 82.0 252 48.8
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 9.2e-14 81.6 257 47.5
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 7.8e-13 78.6 252 48.0
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 1.3e-12 77.8 271 48.0
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.3e-12 77.8 255 43.5
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.9e-11 73.9 86 45.3
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.5e-11 73.6 78 47.4
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 3.3e-11 73.2 88 44.3
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 5.6e-11 72.4 88 44.3
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 2.1e-10 70.5 85 43.5
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 2.1e-10 70.5 255 46.3
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 3.6e-10 69.7 84 46.4
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 3.6e-10 69.7 250 47.6
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 3.6e-10 69.7 77 44.2
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 4.7e-10 69.3 88 48.9
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 6.2e-10 68.9 249 47.8
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 8.1e-10 68.6 260 47.7
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.1e-09 68.2 250 46.8
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.4e-09 67.8 82 42.7
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 1.8e-09 67.4 86 43.0
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.1e-09 66.6 237 48.1
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 3.1e-09 66.6 88 42.0
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 5.2e-09 65.9 86 47.7
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 5.2e-09 65.9 86 43.0
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 5.2e-09 65.9 241 49.8
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 9.0e-09 65.1 256 49.2
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 9.0e-09 65.1 258 37.6
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 9.0e-09 65.1 90 45.6
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 9.0e-09 65.1 90 45.6
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 9.0e-09 65.1 84 45.2
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 1.2e-08 64.7 81 45.7
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 1.2e-08 64.7 89 46.1
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.2e-08 64.7 165 61.8
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.5e-08 64.3 192 55.2
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 1.5e-08 64.3 245 46.1
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 1.5e-08 64.3 90 43.3
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 2.0e-08 63.9 90 42.2
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.6e-08 63.5 244 47.1
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 5.8e-08 62.4 88 39.8
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 5.8e-08 62.4 255 51.0
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 7.6e-08 62.0 233 38.2
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 2.2e-07 60.5 255 48.6
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.2e-07 60.5 253 47.8
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 3.8e-07 59.7 81 46.9
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 6.4e-07 58.9 88 38.6
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 6.4e-07 58.9 86 41.9
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.1e-06 58.2 254 41.7
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.4e-06 57.8 245 47.8
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.4e-06 57.0 254 41.7
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 5.4e-06 55.8 76 39.5
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 7.1e-06 55.5 61 47.5


User provided reference genes

Program Settings