Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.7e-95 350.9 178 100.0
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.2e-45 185.7 140 71.4
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.2e-45 185.3 135 73.3
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 4.6e-44 181.8 140 70.0
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 4.8e-41 171.8 170 59.4
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 6.2e-41 171.4 170 59.4
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 6.2e-41 171.4 170 59.4
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 8.2e-41 171.0 170 58.8
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.1e-40 170.6 170 58.2
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 1.4e-40 170.2 170 58.8
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.8e-40 169.9 170 58.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.4e-40 169.5 170 58.2
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-40 169.5 165 60.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.4e-40 169.5 170 58.2
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.4e-40 169.5 170 58.2
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 2.4e-40 169.5 170 58.2
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.4e-40 169.5 170 58.2
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 4.0e-40 168.7 170 58.2
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.0e-40 168.7 170 58.2
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 5.3e-40 168.3 168 58.3
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 5.3e-40 168.3 168 58.3
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 5.3e-40 168.3 168 58.3
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 5.3e-40 168.3 170 57.6
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 5.3e-40 168.3 170 57.6
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 6.9e-40 167.9 166 59.0
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.9e-40 167.9 170 57.6
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.9e-40 167.9 170 57.6
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.2e-39 167.2 170 57.6
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.2e-39 167.2 165 58.8
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 2.0e-39 166.4 170 57.6
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 2.0e-39 166.4 170 57.6
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 2.0e-39 166.4 170 57.6
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.0e-39 166.4 170 57.1
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 2.6e-39 166.0 170 58.2
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.6e-39 166.0 170 57.1
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 2.6e-39 166.0 195 52.3
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.1
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.6
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.6
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.4e-39 165.6 170 57.6
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 4.5e-39 165.2 170 56.5
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 4.5e-39 165.2 170 57.1
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 4.5e-39 165.2 166 57.8
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 5.8e-39 164.9 170 57.1
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.8e-39 164.9 170 57.1
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 7.6e-39 164.5 170 57.6
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 7.6e-39 164.5 170 56.5
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 7.6e-39 164.5 170 57.1
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.0e-38 164.1 170 57.1
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.3e-38 163.7 166 58.4
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.3e-38 163.7 170 56.5
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.7e-38 163.3 170 56.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 1.7e-38 163.3 170 56.5
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.2e-38 162.9 176 55.1
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 4.9e-38 161.8 165 57.6
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 6.5e-38 161.4 170 55.9
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 6.5e-38 161.4 170 55.9
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 6.5e-38 161.4 170 55.9
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.1e-37 160.6 165 57.0
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.1e-37 160.6 170 55.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 3.2e-37 159.1 183 52.5
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.5e-37 158.3 170 56.5
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.2e-36 157.1 183 51.9
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.6e-36 156.8 168 56.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 3.9e-35 152.1 157 56.7
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.9e-35 152.1 164 55.5
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 8.7e-35 151.0 164 54.3
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 1.9e-34 149.8 116 69.0
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.7e-34 148.3 110 70.9
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.3e-33 147.1 157 55.4
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.2e-33 146.4 174 50.6
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 6.9e-32 141.4 142 57.7
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 9.0e-32 141.0 145 57.2
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.0e-31 139.8 164 52.4
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.6e-31 139.4 165 53.9
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-31 138.3 137 59.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 7.6e-31 137.9 141 57.4
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 7.6e-31 137.9 141 58.2
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.2e-30 136.3 137 58.4
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.9e-30 136.0 141 56.0
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 3.8e-30 135.6 137 58.4
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 5.0e-30 135.2 137 57.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.5e-30 134.4 137 58.4
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.4e-29 133.7 137 57.7
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.4e-29 133.7 136 57.4
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.9e-29 133.3 136 56.6
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.2e-29 132.5 137 56.2
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.2e-28 130.6 110 63.6
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.2e-28 130.6 106 67.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.1e-28 129.8 155 51.6
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 4.6e-28 128.6 233 39.1
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.8e-25 119.4 137 52.6
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 5.0e-22 108.6 122 53.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.2e-21 105.9 122 53.3
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.6e-20 103.6 118 54.2
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 6.1e-20 101.7 169 38.5
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.4e-19 100.5 118 53.4
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 2.3e-19 99.8 129 51.2
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.9e-19 99.0 118 52.5
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 3.9e-19 99.0 118 53.4
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-18 97.4 95 61.1
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-18 97.4 95 61.1
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.7e-17 93.6 229 34.5
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 3.1e-16 89.4 48 85.4
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-16 89.0 233 32.2
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 6.9e-16 88.2 51 80.4
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.1e-10 70.9 151 35.8
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.3e-10 69.3 34 88.2
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.7e-09 67.0 66 59.1
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 2.2e-09 66.6 66 60.6
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.1e-08 64.3 32 87.5
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 4.1e-08 62.4 75 52.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 4.1e-08 62.4 35 88.6
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 4.1e-08 62.4 75 52.0
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 4.1e-08 62.4 79 48.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 9.1e-08 61.2 35 80.0
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.2e-06 56.6 30 90.0
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.2e-06 56.6 56 51.8


User provided reference genes

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