Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 8.0e-135 483.8 252 100.0
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 4.0e-126 454.9 254 92.9
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 4.9e-124 448.0 254 91.3
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 7.1e-123 444.1 252 90.9
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 2.1e-122 442.6 252 90.1
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 6.0e-122 441.0 250 90.0
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 7.8e-122 440.7 253 91.7
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 7.8e-122 440.7 252 89.7
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 8.6e-121 437.2 252 88.1
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 4.3e-120 434.9 252 88.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 86.1
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 88.9
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 86.1
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 6.2e-119 431.0 252 85.7
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 86.9
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 8.1e-119 430.6 251 86.5
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 87.3
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 87.7
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 4.0e-118 428.3 252 87.7
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 8.9e-118 427.2 252 87.3
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 84.9
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 87.7
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 86.1
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 86.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 2.0e-117 426.0 250 85.6
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 88.1
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 84.5
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 86.5
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.9
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.9
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 85.7
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.9
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.1
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 86.5
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 87.7
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 86.9
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 86.1
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 84.9
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 84.9
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 85.3
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.5
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 84.5
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 86.1
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 85.3
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 85.7
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 4.9e-116 421.4 252 85.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 84.5
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 84.5
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 84.1
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 84.1
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.1e-115 420.2 248 86.3
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 85.7
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 85.3
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 84.1
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 86.5
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 86.1
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 84.9
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 7.1e-115 417.5 281 76.5
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 9.2e-115 417.2 253 85.8
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 83.7
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 83.7
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 2.7e-114 415.6 250 83.2
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 82.9
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 1.7e-113 412.9 256 82.4
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 256 82.4
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 84.1
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 81.3
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 1.5e-112 409.8 283 76.7
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 82.1
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 81.3
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 84.5
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 7.3e-112 407.5 283 76.7
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 1.1e-110 403.7 260 80.4
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 80.2
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 79.4
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 80.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 80.2
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 80.6
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 5.3e-110 401.4 239 85.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 5.3e-110 401.4 253 79.4
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 9.0e-110 400.6 249 81.5
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 79.4
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 5.8e-109 397.9 254 80.3
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 78.6
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 9.9e-109 397.1 249 81.5
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 1.3e-108 396.7 249 81.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 4.2e-107 391.7 252 81.0
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.7e-106 389.0 259 78.4
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 5.1e-105 384.8 221 90.5
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 9.6e-104 380.6 256 76.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.8e-103 379.0 256 76.2
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 9.0e-102 374.0 272 75.4
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.3e-100 370.2 252 74.2
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 1.7e-100 369.8 254 74.8
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 2.7e-98 362.5 252 74.6
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.5e-96 356.7 252 73.4
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.2e-93 347.1 255 73.3
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 4.5e-93 345.1 267 67.0
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 1.1e-91 340.5 252 72.2
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 4.5e-85 318.5 191 85.3
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 5.8e-85 318.2 190 83.7
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 8.4e-84 314.3 177 89.8
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.4e-83 313.5 274 65.0
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 9.3e-83 310.8 176 87.5
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.9e-80 303.1 177 87.6
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.5e-80 302.8 229 69.4
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.5e-77 293.5 252 61.1
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.0e-72 276.6 278 55.0
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 7.4e-72 274.6 255 56.5
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.1e-67 260.8 155 85.2
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 9.7e-64 247.7 254 52.8
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 2.2e-63 246.5 146 85.6
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 2.4e-62 243.0 252 55.6
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.1e-54 215.7 254 47.2
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 3.6e-50 202.6 123 82.9
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 5.0e-36 155.6 96 79.2
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 5.0e-36 155.6 91 83.5
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 6.6e-36 155.2 86 91.9
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.9e-28 129.8 117 62.4
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.3e-19 99.8 63 74.6
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.1e-13 80.5 49 77.6
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 2.1e-10 70.5 34 88.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 2.8e-10 70.1 49 67.3


User provided reference genes

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