Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 4.5e-302 1040.4 507 100.0
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.0e-237 826.6 514 77.0
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.9e-237 824.7 515 78.1
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 5.8e-233 810.8 509 76.4
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 3.3e-220 768.5 505 73.7
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 4.3e-220 768.1 505 73.3
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 4.7e-219 764.6 507 72.0
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 4.9e-216 754.6 508 71.7
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 8.4e-216 753.8 506 71.5
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.1e-215 753.4 508 71.5
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 1.9e-215 752.7 508 71.5
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.4e-215 752.3 505 71.5
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 6.0e-214 747.7 498 72.3
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.0e-213 746.9 512 70.9
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 3.0e-213 745.3 492 72.8
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.9e-213 745.0 504 71.6
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 5.1e-213 744.6 482 72.8
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.6e-213 744.2 505 70.1
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 9.6e-212 740.3 453 77.3
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 9.6e-212 740.3 509 70.7
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.1e-211 739.2 504 72.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 2.8e-211 738.8 502 71.1
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 6.2e-211 737.6 499 70.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 6.2e-211 737.6 508 71.3
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 8.1e-211 737.3 549 67.2
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.1e-210 736.9 510 70.2
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 5.3e-210 734.6 506 69.6
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 5.3e-210 734.6 514 69.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 6.9e-210 734.2 507 68.2
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.2e-209 733.4 501 70.5
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 3.4e-209 731.9 507 68.6
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 4.5e-209 731.5 494 71.3
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 5.8e-209 731.1 503 69.8
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.3e-208 729.9 513 70.4
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 3.8e-208 728.4 507 68.6
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 3.8e-208 728.4 513 70.4
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 6.4e-208 727.6 480 71.0
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.1e-207 726.9 502 70.3
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.2e-207 724.9 502 69.1
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 4.2e-207 724.9 502 68.9
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 4.2e-207 724.9 490 70.0
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 4.6e-206 721.5 497 68.6
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.8e-205 719.5 514 69.3
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.8e-205 719.5 509 68.0
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 2.3e-205 719.2 501 68.3
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 5.1e-205 718.0 509 69.0
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.1e-204 716.8 487 69.4
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.6e-204 714.5 494 70.2
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 5.6e-204 714.5 474 72.4
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.8e-203 712.2 506 68.2
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.8e-203 712.2 507 69.2
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.8e-202 709.5 507 66.9
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 3.1e-202 708.8 506 68.8
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 3.1e-202 708.8 514 66.7
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.0e-201 706.1 483 67.9
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 5.8e-201 704.5 506 68.0
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 7.6e-201 704.1 502 68.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.0e-200 703.7 513 66.7
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.9e-200 702.2 500 66.4
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 6.4e-200 701.0 505 65.9
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 4.2e-199 698.4 489 66.7
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 9.3e-199 697.2 508 67.5
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.2e-198 696.8 503 65.4
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 3.5e-198 695.3 490 67.1
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-197 693.7 499 67.9
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.3e-197 693.3 487 66.7
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.9e-197 691.8 454 72.0
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.1e-196 690.3 499 67.7
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.5e-196 689.9 503 67.4
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.3e-195 686.8 507 66.7
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.8e-195 685.6 516 66.1
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.1e-194 683.7 449 71.9
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.2e-193 680.2 506 66.0
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 7.6e-193 677.6 505 65.3
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 1.7e-192 676.4 505 65.5
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.4e-192 674.1 506 65.6
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.9e-191 672.9 482 67.4
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 5.5e-191 671.4 466 69.7
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.5e-191 671.4 499 63.5
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.6e-190 669.8 467 69.4
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 6.1e-190 667.9 505 65.3
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 6.1e-190 667.9 507 64.5
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 7.9e-190 667.5 505 65.1
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 7.9e-190 667.5 505 65.1
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 3.0e-189 665.6 496 64.1
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.1e-189 664.8 508 62.4
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 6.7e-189 664.5 508 64.2
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 7.4e-188 661.0 528 62.9
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 2.2e-187 659.4 488 65.0
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.4e-186 656.8 509 63.1
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 2.0e-185 652.9 499 65.3
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 1.4e-183 646.7 552 59.6
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.1e-182 642.9 507 64.9
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 3.8e-176 622.1 478 63.4
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 3.3e-172 609.0 507 58.6
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 8.8e-165 584.3 513 58.9
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 1.5e-148 530.4 362 72.1
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 7.0e-146 521.5 379 66.8
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 6.8e-141 505.0 371 66.0
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 9.2e-138 494.6 354 66.7
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 5.4e-130 468.8 360 64.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 8.4e-107 391.7 312 61.5
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.4e-106 390.2 487 46.8
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.4e-101 374.4 307 59.6
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 2.5e-95 353.6 233 64.8
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 1.9e-87 327.4 214 64.5
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-71 273.9 169 76.9
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 1.3e-70 271.6 184 68.5
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 7.2e-58 229.2 141 76.6
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 2.1e-57 227.6 148 64.2
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 1.1e-21 109.0 104 56.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.0e-11 74.3 52 61.5
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 8.6e-11 72.8 78 46.2
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 3.3e-10 70.9 78 47.4


User provided reference genes

Program Settings