Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.0e-154 550.1 288 100.0
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.2e-72 276.6 243 63.4
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 5.5e-71 271.9 243 62.1
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.8e-69 266.9 243 59.7
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 5.9e-65 251.9 243 58.8
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 2.2e-51 206.8 246 50.0
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 2.4e-50 203.4 238 49.2
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 5.3e-50 202.2 238 46.6
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 5.3e-50 202.2 223 52.0
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 7.0e-50 201.8 238 49.2
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.6e-49 200.7 238 50.0
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.0e-49 200.3 246 49.2
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 3.5e-49 199.5 237 48.9
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.5e-49 199.5 238 47.9
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.3e-48 197.6 238 49.6
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 5.0e-48 195.7 234 50.0
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 8.5e-48 194.9 238 47.9
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.2e-47 192.6 239 45.6
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 5.5e-47 192.2 237 46.4
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 7.2e-47 191.8 237 46.8
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.2e-46 191.0 237 46.0
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 1.2e-46 191.0 238 45.4
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.6e-46 190.7 238 47.5
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 2.1e-46 190.3 238 45.8
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.1e-46 190.3 239 46.9
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.7e-46 189.9 237 46.0
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 4.7e-46 189.1 239 46.4
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.7e-46 189.1 239 45.2
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 6.1e-46 188.7 238 47.9
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 8.0e-46 188.3 240 47.5
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.0e-45 188.0 258 43.4
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.4e-45 187.6 256 42.6
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.4e-45 187.6 238 50.0
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.8e-45 187.2 238 46.2
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.3e-45 186.8 239 45.2
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 3.0e-45 186.4 249 44.6
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 4.0e-45 186.0 234 48.3
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 5.2e-45 185.7 235 47.7
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 5.2e-45 185.7 249 45.0
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 6.8e-45 185.3 234 45.3
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.2e-44 184.5 252 45.6
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.0e-44 183.7 252 45.6
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 2.6e-44 183.3 239 48.1
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 2.6e-44 183.3 238 45.4
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 2.6e-44 183.3 249 40.6
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.4e-44 182.6 238 48.3
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.4e-44 182.6 233 45.5
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 9.8e-44 181.4 239 47.3
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 1.3e-43 181.0 250 43.6
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.7e-43 180.6 238 47.9
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-42 177.9 233 45.1
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 1.1e-42 177.9 236 46.6
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 1.4e-42 177.6 239 44.8
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.4e-42 177.6 238 45.4
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.8e-42 177.2 259 42.5
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 5.4e-42 175.6 236 45.3
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 9.1e-42 174.9 240 45.0
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 2.7e-41 173.3 246 43.9
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 5.9e-41 172.2 234 43.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.3e-40 171.0 223 46.6
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 1.7e-40 170.6 236 46.2
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.7e-40 170.6 288 38.2
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 3.8e-40 169.5 253 42.3
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 5.0e-40 169.1 242 45.0
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.5e-39 167.5 238 44.1
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.6e-38 164.1 229 45.9
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 2.1e-38 163.7 242 44.2
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 4.7e-38 162.5 238 39.1
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 8.0e-38 161.8 219 43.4
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.0e-37 161.4 240 45.4
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.4e-37 161.0 246 40.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.8e-37 160.6 233 43.3
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 4.0e-37 159.5 217 44.2
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 4.0e-37 159.5 210 44.3
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 4.0e-37 159.5 212 44.3
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.2e-36 157.9 233 44.2
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 1.2e-36 157.9 233 43.3
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 2.6e-36 156.8 235 44.3
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 3.4e-36 156.4 234 44.0
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 5.7e-36 155.6 215 43.7
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.2e-35 153.7 267 41.2
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 2.8e-35 153.3 233 42.9
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.8e-35 153.3 233 43.8
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 6.3e-35 152.1 220 43.2
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 8.3e-35 151.8 233 44.6
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 8.3e-35 151.8 233 44.6
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 1.1e-34 151.4 233 43.8
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.4e-34 151.0 241 43.6
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 4.1e-34 149.4 233 44.2
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.1e-31 141.4 214 42.1
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 5.7e-28 129.0 216 38.4
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 5.7e-28 129.0 121 55.4
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 5.7e-28 129.0 121 55.4
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 9.8e-28 128.3 300 31.3
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 2.2e-27 127.1 239 37.2
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 2.9e-27 126.7 98 62.2
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 2.9e-27 126.7 102 61.8
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 6.4e-27 125.6 220 40.5
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 1.4e-26 124.4 98 59.2
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 7.0e-26 122.1 256 33.6
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 1.2e-25 121.3 107 57.9
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 3.5e-25 119.8 257 33.1
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.5e-25 119.8 102 56.9
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 7.8e-25 118.6 230 39.6
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.3e-24 117.9 90 62.2
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 5.0e-24 115.9 244 35.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.5e-23 114.4 178 41.0
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.6e-22 110.9 185 39.5
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.3e-21 107.1 229 31.9
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 4.4e-20 102.8 242 31.4
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 8.3e-19 98.6 87 52.9
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 7.8e-17 92.0 260 27.7
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 2.3e-16 90.5 181 35.9
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 2.3e-16 90.5 176 34.7
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 5.0e-16 89.4 181 35.4
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.9e-15 87.4 121 42.1
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.5e-15 87.0 62 66.1
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 4.7e-14 82.8 55 76.4
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.3e-13 80.5 62 61.3
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 3.1e-13 80.1 58 65.5
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 5.2e-13 79.3 81 56.8
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 1.5e-12 77.8 153 38.6
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 4.9e-11 72.8 169 33.7
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 6.4e-11 72.4 231 26.8
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 1.9e-10 70.9 164 31.1
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 1.2e-09 68.2 236 25.0
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.6e-09 67.8 62 59.7
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.7e-09 67.0 144 32.6
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 4.6e-09 66.2 211 28.4
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 1.1e-07 61.6 147 34.7
MCO01G785 Micromonas commoda HOM05D005370 ORTHO05D006659 3.6e-06 56.6 83 34.9
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.2e-06 55.8 174 28.2


User provided reference genes

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