Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 7.4e-141 503.8 248 100.0
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 9.2e-83 310.8 205 74.6
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.6e-74 283.5 196 72.4
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.1e-62 244.2 198 62.6
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.1e-62 244.2 198 62.6
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 8.9e-62 241.1 198 62.6
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 2.6e-61 239.6 198 61.1
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.4e-61 239.2 201 62.7
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 4.4e-61 238.8 198 61.6
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 5.8e-61 238.4 194 62.4
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.6e-61 238.0 200 64.0
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 7.6e-61 238.0 198 61.1
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 7.6e-61 238.0 202 60.4
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 9.9e-61 237.7 198 63.6
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 9.9e-61 237.7 196 60.7
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.9e-60 236.1 209 58.4
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.9e-59 233.4 200 60.5
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.4e-59 233.0 247 53.8
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 4.2e-59 232.3 198 61.1
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 5.4e-59 231.9 199 60.3
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 7.1e-59 231.5 202 59.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.1e-59 231.5 200 59.5
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 9.2e-59 231.1 199 56.8
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.1e-58 229.9 199 59.3
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 2.7e-58 229.6 215 56.7
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 3.5e-58 229.2 197 56.9
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 4.6e-58 228.8 234 52.6
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 6.0e-58 228.4 200 59.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 6.0e-58 228.4 198 57.1
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 7.8e-58 228.0 201 59.7
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 7.8e-58 228.0 197 59.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.0e-57 227.6 197 60.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.3e-57 227.3 238 56.7
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 2.3e-57 226.5 202 59.9
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 3.9e-57 225.7 198 57.6
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 5.1e-57 225.3 196 57.1
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 8.7e-57 224.6 198 58.6
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 8.7e-57 224.6 197 56.3
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 1.9e-56 223.4 196 61.2
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.3e-56 222.6 201 61.2
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 2.8e-55 219.5 198 56.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 2.8e-55 219.5 214 53.7
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 4.7e-55 218.8 201 57.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 6.2e-55 218.4 198 55.6
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 6.2e-55 218.4 200 56.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.1e-54 217.6 248 52.0
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 5.3e-54 215.3 187 59.4
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 9.0e-54 214.5 248 51.6
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.5e-53 213.8 199 56.3
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 5.8e-53 211.8 197 53.8
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.7e-52 210.3 200 53.5
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.4e-51 206.5 212 52.4
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.4e-51 206.5 212 50.9
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 4.2e-51 205.7 196 52.0
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 5.4e-51 205.3 197 51.8
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 7.1e-51 204.9 197 52.3
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 1.2e-50 204.1 201 52.2
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 2.1e-50 203.4 195 50.8
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.5e-50 202.6 195 51.8
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.7e-49 200.3 197 51.3
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 3.0e-49 199.5 186 59.1
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 2.5e-48 196.4 162 60.5
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 4.3e-48 195.7 198 51.5
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 7.3e-48 194.9 197 49.7
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.6e-47 193.7 215 51.6
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 2.8e-47 193.0 196 50.0
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.6e-47 192.6 198 50.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 4.8e-47 192.2 201 49.8
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 8.1e-47 191.4 198 50.5
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.1e-46 191.0 197 51.8
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.8e-46 190.3 188 51.1
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.5e-45 187.2 185 56.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.0e-45 186.8 197 48.2
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.0e-45 186.8 197 48.2
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.0e-45 186.8 197 48.2
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 2.6e-45 186.4 194 47.4
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 7.6e-45 184.9 205 46.8
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 3.8e-44 182.6 201 49.8
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.4e-43 179.9 192 48.4
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.4e-43 178.7 193 51.3
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 2.1e-42 176.8 200 45.5
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.3e-41 173.3 222 42.3
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 5.6e-40 168.7 140 61.4
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.1e-38 164.5 200 49.0
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 1.4e-38 164.1 268 42.2
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.4e-38 163.3 112 69.6
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 3.1e-38 162.9 197 48.7
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.9e-32 143.7 239 38.5
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.6e-29 133.3 228 38.6
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 3.2e-27 126.3 150 45.3
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 1.2e-26 124.4 203 32.5
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 3.5e-26 122.9 110 62.7
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.6e-26 122.5 207 39.6
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 8.2e-23 111.7 108 57.4
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 7.7e-21 105.1 164 39.0
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 6.1e-18 95.5 272 29.0
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 6.7e-17 92.0 139 38.8
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.5e-16 90.9 232 30.2
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 4.8e-15 85.9 197 32.0
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.2e-13 81.3 133 36.8
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.6e-13 80.1 72 54.2
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 8.5e-12 75.1 106 41.5
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.6e-10 70.9 208 29.3


User provided reference genes

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