Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 2.7e-160 568.5 269 100.0
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 6.8e-116 421.0 263 75.3
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.5e-110 403.3 262 73.7
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 5.6e-110 401.4 263 73.4
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.1e-109 399.4 261 72.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.8e-109 399.1 263 74.1
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 6.2e-109 397.9 261 72.4
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.1e-108 397.1 263 71.1
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 1.8e-108 396.4 263 72.2
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 6.9e-108 394.4 263 72.6
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.0e-107 392.9 260 71.9
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 2.0e-107 392.9 263 70.7
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 3.4e-107 392.1 258 69.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 3.4e-107 392.1 253 72.7
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.8e-107 391.3 261 71.3
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.3e-106 390.2 262 69.1
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.2e-106 389.4 261 71.3
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 4.9e-106 388.3 258 69.0
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.1e-105 387.1 262 69.5
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.9e-105 386.3 259 68.7
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.9e-105 386.3 262 71.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.4e-105 386.0 258 68.6
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 3.2e-105 385.6 262 69.1
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 4.2e-105 385.2 263 68.4
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 5.4e-105 384.8 264 70.5
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.2e-104 383.6 267 70.8
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.6e-104 383.3 263 69.2
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 4.6e-104 381.7 261 70.9
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 6.0e-104 381.3 263 69.6
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 6.0e-104 381.3 262 69.1
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.8e-104 380.9 257 70.8
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 7.8e-104 380.9 263 68.4
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.0e-103 380.6 261 69.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.7e-103 379.8 263 69.6
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 5.1e-103 378.3 266 69.5
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.5e-102 376.7 262 69.5
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.9e-102 376.3 262 68.7
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.3e-102 375.2 261 69.0
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 7.3e-102 374.4 259 69.1
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.3e-101 373.6 261 68.6
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.4e-100 369.4 262 67.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 6.9e-100 367.9 262 65.3
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 6.9e-100 367.9 258 66.7
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.0e-100 367.5 262 67.2
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 9.0e-100 367.5 262 66.8
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 2.0e-99 366.3 261 67.4
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-99 365.9 262 67.6
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.4e-99 365.5 262 67.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 4.5e-99 365.2 264 65.5
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 4.9e-98 361.7 304 58.2
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 8.4e-98 360.9 262 66.4
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.9e-97 359.8 262 64.9
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.1e-96 356.3 264 64.8
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 7.9e-96 354.4 265 64.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 3.3e-94 349.0 262 63.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 9.6e-94 347.4 220 73.2
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 9.6e-94 347.4 262 64.5
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 8.1e-93 344.4 262 63.0
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-92 344.0 254 66.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 4.0e-92 342.0 261 64.8
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 9.0e-92 340.9 262 62.6
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 3.4e-91 339.0 260 62.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 4.2e-89 332.0 225 67.6
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.9e-88 327.8 266 62.4
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.5e-86 322.8 217 72.8
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 4.3e-86 322.0 263 59.7
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.8e-84 316.6 261 60.5
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 6.9e-84 314.7 261 61.7
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 4.6e-80 302.0 220 63.2
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.0e-80 301.6 253 60.1
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 5.3e-76 288.5 224 61.6
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 5.0e-74 282.0 228 60.1
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.9e-73 280.0 179 73.7
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 3.2e-73 279.3 262 54.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 2.8e-69 266.2 176 71.0
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.4e-59 232.6 213 55.4
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.4e-59 232.6 213 55.4
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.5e-57 226.5 181 63.5
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.7e-56 223.0 280 45.7
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.2e-51 207.6 179 55.3
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 7.2e-49 198.4 161 60.9
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.2e-48 197.6 128 74.2
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 6.1e-48 195.3 200 51.0
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 8.0e-48 194.9 132 68.2
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 4.2e-41 172.6 131 63.4
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 6.1e-40 168.7 100 78.0
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 5.7e-38 162.2 139 56.8
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.1e-32 142.1 103 62.1
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 6.8e-31 138.7 315 30.5
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.0e-30 137.1 315 30.5
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 9.2e-28 128.3 106 55.7
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.8e-24 116.7 95 57.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 6.4e-21 105.5 64 68.8
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.1e-20 104.8 60 71.7
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 3.0e-18 96.7 89 56.2
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 9.5e-17 91.7 113 45.1
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 8.0e-16 88.6 76 59.2


User provided reference genes

Program Settings