Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.4e-156 556.2 282 100.0
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.2e-115 420.2 284 75.0
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 7.9e-115 417.5 275 76.0
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.4e-111 406.0 336 64.9
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.4e-108 396.7 273 72.5
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 9.4e-108 394.0 280 70.7
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 4.7e-107 391.7 278 70.5
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 4.7e-107 391.7 278 70.1
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.5e-105 386.7 278 70.1
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 1.8e-103 379.8 282 68.8
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 1.8e-103 379.8 272 72.1
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 9.1e-103 377.5 273 70.0
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 1.2e-102 377.1 271 70.8
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.2e-102 377.1 278 69.8
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.2e-102 377.1 283 70.3
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 2.6e-102 375.9 270 70.0
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 4.5e-102 375.2 272 69.1
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 1.3e-101 373.6 271 71.2
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.3e-101 373.6 277 68.2
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 1.3e-101 373.6 274 69.3
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.7e-101 373.2 273 70.0
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 2.2e-101 372.9 275 69.1
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.2e-101 372.9 278 69.8
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 3.2e-100 369.0 282 67.4
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 5.5e-100 368.2 288 67.7
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 5.5e-100 368.2 280 65.7
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 5.5e-100 368.2 272 69.5
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 7.2e-100 367.9 281 70.8
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 1.2e-99 367.1 272 69.1
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 2.1e-99 366.3 277 68.6
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.7e-99 365.9 270 68.9
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 3.6e-99 365.5 273 66.7
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.4e-98 363.6 276 65.9
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 4.0e-98 362.1 283 65.4
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 4.0e-98 362.1 282 66.0
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.0e-98 362.1 282 66.0
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.2e-98 361.7 285 66.0
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 1.5e-97 360.1 273 67.8
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 3.3e-97 359.0 274 67.2
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 7.4e-97 357.8 284 66.9
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.3e-96 357.1 292 64.7
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 1.7e-96 356.7 280 66.8
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 2.8e-96 355.9 281 65.8
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.8e-95 353.2 272 66.9
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.1e-95 352.1 283 64.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 7.0e-95 351.3 315 60.0
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.1e-92 344.0 271 64.2
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 1.5e-92 343.6 282 64.9
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 2.5e-92 342.8 280 65.0
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 4.2e-92 342.0 273 63.0
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 5.5e-92 341.7 223 78.5
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 6.1e-91 338.2 331 55.9
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 8.0e-91 337.8 331 55.9
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 3.0e-90 335.9 273 62.3
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 4.0e-90 335.5 272 63.2
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 1.5e-89 333.6 270 64.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 3.4e-89 332.4 273 62.6
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 3.4e-89 332.4 268 63.8
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 5.7e-89 331.6 288 61.5
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 5.7e-89 331.6 271 63.1
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 5.7e-89 331.6 273 61.9
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 2.2e-88 329.7 272 65.1
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 4.8e-88 328.6 286 59.1
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 1.4e-87 327.0 274 62.4
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 1.8e-87 326.6 270 63.0
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.0e-85 320.9 268 61.6
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 1.3e-85 320.5 269 61.0
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.7e-85 320.1 283 59.7
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 1.7e-85 320.1 279 60.2
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 2.9e-85 319.3 273 60.4
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 2.9e-85 319.3 279 59.9
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 2.9e-85 319.3 273 60.4
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 8.5e-85 317.8 283 59.7
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-84 317.4 283 60.1
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 1.9e-84 316.6 279 59.5
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.9e-84 316.6 210 74.8
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 2.5e-84 316.2 271 60.5
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 1.0e-82 310.8 233 69.1
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 8.3e-80 301.2 209 70.8
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 5.4e-79 298.5 280 60.7
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 1.6e-78 297.0 230 63.5
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 5.9e-78 295.0 273 57.5
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 7.7e-78 294.7 286 56.3
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 1.3e-77 293.9 249 62.2
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 5.6e-76 288.5 197 71.6
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 1.6e-75 287.0 209 66.5
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 3.0e-74 282.7 246 58.5
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 1.3e-72 277.3 234 58.5
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.4e-71 273.9 238 60.1
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 4.0e-66 255.8 226 57.5
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.7e-62 243.0 219 60.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 1.0e-61 241.1 174 71.3
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 2.2e-56 223.4 190 60.0
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 8.3e-56 221.5 224 55.8
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.6e-54 217.2 167 69.5
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.5e-54 216.1 166 65.7
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.2e-50 202.2 133 72.2
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 2.0e-49 200.3 161 64.0
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 5.8e-49 198.7 207 54.1
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 3.7e-48 196.1 165 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 5.4e-47 192.2 181 56.9
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 3.9e-45 186.0 237 47.3
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 1.1e-44 184.5 306 38.9
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.7e-40 170.6 141 60.3
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.9e-37 159.5 126 59.5
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.2e-33 147.9 116 67.2
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 4.4e-33 146.0 129 62.8
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 6.4e-32 142.1 98 71.4
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.3e-27 127.9 102 62.7
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.8e-27 126.7 87 67.8
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 4.8e-27 125.9 101 62.4
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 5.8e-25 119.0 122 51.6
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 1.1e-23 114.8 107 56.1
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.9e-23 114.0 96 57.3
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 1.0e-21 108.2 129 51.9
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 1.9e-20 104.0 103 53.4
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 3.7e-19 99.8 233 33.5
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 6.5e-16 89.0 94 52.1
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-15 86.7 96 51.0
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 2.3e-13 80.5 84 51.2
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.0e-13 80.1 49 77.6
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 4.3e-12 76.3 83 50.6
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 1.3e-11 74.7 68 55.9
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 6.3e-11 72.4 53 64.2
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 3.1e-10 70.1 65 60.0


User provided reference genes

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