Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 2.0e-88 329.3 201 100.0
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 9.2e-49 197.6 198 67.7
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.3e-47 193.7 198 66.7
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.3e-47 193.0 195 65.6
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.3e-47 193.0 199 68.8
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 3.0e-47 192.6 192 67.7
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 3.0e-47 192.6 192 66.1
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.9e-47 192.2 195 66.2
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 6.6e-47 191.4 164 76.2
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.1e-46 190.7 195 65.6
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.1e-46 190.7 195 65.6
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.1e-46 190.7 158 77.8
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 3.3e-46 189.1 154 79.9
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 3.3e-46 189.1 190 70.0
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.3e-46 189.1 192 67.7
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.3e-46 189.1 192 67.7
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 4.3e-46 188.7 195 66.7
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 5.6e-46 188.3 178 69.7
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 7.3e-46 188.0 179 70.4
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 7.3e-46 188.0 197 66.0
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.6e-45 186.8 198 65.2
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 1.6e-45 186.8 195 66.2
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 2.8e-45 186.0 154 77.9
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 4.7e-45 185.3 150 80.0
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 6.2e-45 184.9 196 65.3
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.1e-44 184.1 196 63.8
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 1.4e-44 183.7 195 65.1
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 1.8e-44 183.3 154 76.6
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 3.1e-44 182.6 193 64.8
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 4.0e-44 182.2 159 73.6
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 4.0e-44 182.2 188 67.6
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 5.2e-44 181.8 147 81.6
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 5.2e-44 181.8 169 72.8
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 1.2e-43 180.6 165 72.7
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.2e-43 180.6 166 72.9
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.5e-43 180.3 196 64.8
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.5e-43 180.3 198 63.1
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.5e-43 180.3 205 62.9
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 2.0e-43 179.9 195 64.1
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 2.0e-43 179.9 165 72.1
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 2.6e-43 179.5 159 73.6
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 3.4e-43 179.1 150 78.7
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 7.5e-43 177.9 193 61.7
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 7.5e-43 177.9 145 80.7
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 9.8e-43 177.6 188 65.4
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.7e-42 176.8 185 67.0
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 1.7e-42 176.8 196 61.7
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 2.2e-42 176.4 199 63.3
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 2.2e-42 176.4 201 62.2
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 2.9e-42 176.0 194 64.4
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.9e-42 176.0 200 61.0
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 3.7e-42 175.6 188 65.4
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 3.7e-42 175.6 188 65.4
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 3.7e-42 175.6 188 65.4
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 4.9e-42 175.3 188 65.4
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 4.9e-42 175.3 193 64.8
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 6.4e-42 174.9 201 61.2
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.4e-42 174.9 199 62.8
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 6.4e-42 174.9 195 61.5
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 6.4e-42 174.9 169 69.2
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 8.3e-42 174.5 144 77.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 1.1e-41 174.1 193 63.7
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 1.4e-41 173.7 196 63.8
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.9e-41 173.3 198 62.1
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 2.4e-41 172.9 165 70.3
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 3.2e-41 172.6 193 62.2
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.2e-41 172.6 154 73.4
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.1e-41 172.2 199 62.3
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 5.4e-41 171.8 198 61.1
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 7.0e-41 171.4 187 64.7
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.0e-41 171.4 158 70.3
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 9.2e-41 171.0 147 76.2
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 9.2e-41 171.0 198 61.1
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 9.2e-41 171.0 153 73.2
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.2e-40 170.6 197 62.9
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.2e-40 170.6 174 67.2
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.2e-40 170.6 174 67.2
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.6e-40 170.2 198 60.1
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-40 170.2 193 62.2
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-40 170.2 193 62.2
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 1.6e-40 170.2 203 61.6
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.6e-40 170.2 198 62.6
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 3.5e-40 169.1 202 59.4
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 3.5e-40 169.1 196 62.2
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 6.0e-40 168.3 196 60.7
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 1.7e-39 166.8 154 70.8
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.7e-39 166.8 145 75.9
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.3e-39 166.4 174 67.2
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.1e-39 165.2 173 64.2
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 8.6e-39 164.5 197 62.4
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 1.1e-38 164.1 154 73.4
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 1.5e-38 163.7 193 61.1
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 3.3e-38 162.5 171 64.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 4.3e-38 162.2 198 62.1
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.6e-37 160.2 154 71.4
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 1.6e-37 160.2 157 69.4
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 2.1e-37 159.8 141 75.2
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 3.6e-37 159.1 198 59.6
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.1e-36 157.5 196 58.2
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.1e-36 157.5 202 58.9
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.4e-36 157.1 195 57.9
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 4.0e-36 155.6 198 59.6
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 7.1e-33 144.8 153 68.6
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 2.7e-32 142.9 193 54.9
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 1.8e-28 130.2 172 51.7
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 1.8e-28 130.2 196 52.6
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.5e-27 127.1 161 57.8
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.9e-26 122.1 198 50.0
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.1e-25 120.9 109 60.6
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 3.2e-25 119.4 158 58.2
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.1e-22 110.9 201 48.3
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 4.7e-21 105.5 165 52.7
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 1.5e-19 100.5 152 53.9
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 2.6e-19 99.8 146 48.6
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.7e-18 97.1 110 64.5
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.1e-17 94.4 94 53.2
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.9e-15 85.9 136 52.2
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.3e-13 80.9 119 50.4
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-13 80.5 106 52.8
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 4.0e-12 75.9 198 39.4
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.7e-10 70.5 73 47.9


User provided reference genes

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