Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 5.5e-206 720.7 355 100.0
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 7.8e-136 487.6 375 66.4
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 1.7e-135 486.5 375 66.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.3e-134 482.3 358 68.2
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 7.4e-126 454.5 491 52.3
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 1.2e-115 420.6 373 60.1
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.0e-114 417.5 377 58.1
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 1.0e-114 417.5 373 58.7
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.0e-114 417.5 373 58.4
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 3.8e-114 415.6 347 60.5
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 9.3e-113 411.0 346 60.4
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 9.3e-113 411.0 346 60.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 9.3e-113 411.0 372 59.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.2e-112 410.6 346 60.7
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 6.1e-112 408.3 346 61.0
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 1.3e-111 407.1 372 58.9
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 2.3e-111 406.4 346 60.1
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 2.3e-111 406.4 351 59.3
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 3.9e-111 405.6 347 60.2
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 5.1e-111 405.2 346 59.5
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.1e-110 404.1 372 58.6
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.9e-110 403.3 372 58.9
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 2.5e-110 402.9 346 60.4
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 3.7e-109 399.1 372 57.3
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.8e-109 398.7 372 55.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.1e-108 397.5 347 58.2
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.8e-108 396.7 377 56.5
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.8e-108 396.7 355 56.9
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 2.4e-108 396.4 373 56.0
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 3.1e-108 396.0 361 57.9
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 4.1e-108 395.6 346 59.8
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 4.1e-108 395.6 346 59.8
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 6.9e-108 394.8 370 55.7
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 9.0e-108 394.4 369 55.6
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.2e-107 394.0 383 56.1
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.2e-107 394.0 344 58.4
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.5e-107 393.7 383 55.6
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.0e-107 393.3 337 59.1
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 2.6e-107 392.9 305 64.6
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 4.5e-107 392.1 352 57.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 5.9e-107 391.7 372 54.8
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.9e-107 391.7 360 55.8
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 7.7e-107 391.3 358 57.0
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.0e-106 391.0 335 57.9
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.0e-106 391.0 372 56.5
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 2.2e-106 389.8 337 59.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 2.2e-106 389.8 355 58.0
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 5.0e-106 388.7 373 54.7
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.1e-105 387.5 352 58.5
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 1.9e-105 386.7 363 55.1
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 3.2e-105 386.0 346 57.5
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 7.2e-105 384.8 378 55.8
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 7.2e-105 384.8 370 54.6
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 4.6e-104 382.1 338 57.7
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 4.6e-104 382.1 377 54.9
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 3.0e-103 379.4 369 54.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 3.0e-103 379.4 352 56.5
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 8.8e-103 377.9 369 54.5
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 2.5e-102 376.3 352 55.1
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.5e-102 376.3 365 55.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.5e-102 376.3 337 58.8
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 3.3e-102 375.9 352 55.1
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 4.3e-102 375.6 369 53.4
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 4.3e-102 375.6 353 55.5
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 5.7e-102 375.2 352 55.1
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 7.4e-102 374.8 369 53.4
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.3e-101 374.0 365 55.3
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.7e-101 373.6 393 53.2
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.2e-101 373.2 377 54.4
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.2e-101 373.2 332 59.0
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 2.2e-101 373.2 377 55.2
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.8e-101 372.9 353 55.0
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 2.8e-101 372.9 312 60.6
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.1e-100 370.9 358 55.9
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 2.4e-100 369.8 341 56.9
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.2e-99 367.5 382 52.6
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.4e-99 365.9 307 62.2
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 4.5e-99 365.5 306 59.5
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 5.9e-99 365.2 307 62.2
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 6.5e-98 361.7 355 53.8
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 3.2e-97 359.4 348 56.6
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.1e-96 356.7 382 51.3
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 8.8e-95 351.3 355 52.7
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.1e-94 350.9 291 60.5
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.3e-94 349.4 294 61.6
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.7e-93 347.1 328 55.2
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.7e-93 345.9 280 63.6
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 4.1e-92 342.4 334 51.5
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.1e-88 328.6 277 60.3
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.8e-87 327.0 278 62.6
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.5e-83 312.8 261 60.5
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.3e-74 284.3 328 47.3
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.5e-73 278.9 315 49.2
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.5e-73 278.9 315 49.2
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 3.6e-72 276.2 249 59.0
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 6.8e-71 271.9 229 57.2
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 4.8e-69 265.8 279 49.8
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.1e-64 248.8 164 75.6
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 8.9e-63 245.0 225 58.2
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 9.2e-60 235.0 241 51.9
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.9e-44 184.1 170 52.9
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.3e-41 173.3 144 56.2
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.1e-32 144.1 173 42.8
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 2.1e-27 127.5 129 51.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 3.5e-27 126.7 132 47.0
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 4.3e-25 119.8 85 70.6
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 6.2e-24 115.9 182 37.4
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 3.8e-21 106.7 104 47.1
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.3e-20 102.1 135 44.4
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 1.7e-18 97.8 76 63.2
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 1.1e-07 62.0 49 61.2
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 5.8e-06 56.2 32 75.0


User provided reference genes

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