Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 4.5e-119 431.4 237 100.0
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 6.6e-54 214.9 251 53.8
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.8e-51 206.8 254 53.9
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.3e-49 200.7 244 52.0
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 8.3e-49 198.0 243 53.1
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 5.9e-47 191.8 236 50.4
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 1.9e-37 160.2 248 46.4
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.8e-36 156.4 250 44.8
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.8e-36 156.4 251 45.8
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 2.6e-34 149.8 239 44.8
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 1.3e-33 147.5 258 45.0
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 3.2e-32 142.9 235 46.0
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 2.1e-31 140.2 263 40.7
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 2.7e-31 139.8 260 42.3
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 2.3e-30 136.7 259 42.5
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 6.6e-30 135.2 266 39.5
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 4.3e-29 132.5 249 43.4
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 1.6e-28 130.6 263 43.0
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 2.8e-28 129.8 256 41.0
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 3.6e-28 129.4 255 42.0
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 4.7e-28 129.0 264 42.0
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 6.2e-28 128.6 262 38.5
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.1e-27 126.3 267 39.3
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 3.1e-27 126.3 257 42.4
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 3.1e-27 126.3 235 41.3
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 4.0e-27 125.9 212 46.7
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 5.2e-27 125.6 260 39.6
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 8.9e-27 124.8 274 38.3
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 2.6e-26 123.2 261 39.1
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.6e-26 123.2 206 44.7
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 3.4e-26 122.9 264 37.9
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 3.4e-26 122.9 274 38.3
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 4.4e-26 122.5 210 43.8
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 7.6e-26 121.7 262 38.9
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 9.9e-26 121.3 264 37.5
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 9.9e-26 121.3 258 38.8
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 1.3e-25 120.9 194 43.8
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.7e-25 120.6 170 45.9
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 1.7e-25 120.6 254 42.5
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 2.9e-25 119.8 248 38.3
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 3.7e-25 119.4 261 37.9
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 4.9e-25 119.0 178 47.8
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 4.9e-25 119.0 234 38.9
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 6.4e-25 118.6 209 44.5
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 6.4e-25 118.6 293 37.5
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.1e-24 117.9 259 38.6
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 1.4e-24 117.5 262 39.7
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 1.9e-24 117.1 269 38.7
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.2e-24 116.3 257 38.5
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.2e-24 116.3 257 38.5
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.2e-24 116.3 267 37.5
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 4.1e-24 115.9 199 42.2
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 4.1e-24 115.9 207 44.4
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 4.1e-24 115.9 242 38.8
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 5.4e-24 115.5 254 39.8
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 5.4e-24 115.5 254 37.0
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 9.2e-24 114.8 263 37.6
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 9.2e-24 114.8 257 38.5
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 9.2e-24 114.8 257 37.7
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.2e-23 114.4 247 37.7
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.2e-23 114.4 252 39.3
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 2.1e-23 113.6 192 43.8
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.1e-23 113.6 257 37.7
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.1e-23 113.6 257 37.7
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 2.7e-23 113.2 210 43.3
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 2.7e-23 113.2 246 37.8
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.5e-23 112.8 256 38.7
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 4.6e-23 112.5 203 42.4
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 4.6e-23 112.5 256 38.7
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 4.6e-23 112.5 210 43.3
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 6.0e-23 112.1 206 41.7
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 7.8e-23 111.7 268 37.7
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 1.0e-22 111.3 264 34.5
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 1.0e-22 111.3 262 36.6
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.7e-22 110.5 256 37.9
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.7e-22 110.5 256 37.9
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 2.3e-22 110.2 248 39.5
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 2.3e-22 110.2 247 35.6
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 2.3e-22 110.2 241 35.7
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.3e-22 110.2 188 42.6
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 2.3e-22 110.2 249 38.6
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 3.0e-22 109.8 263 38.4
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 3.0e-22 109.8 197 43.7
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 3.0e-22 109.8 210 42.4
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 3.9e-22 109.4 268 37.3
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 5.1e-22 109.0 235 38.3
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 5.1e-22 109.0 199 41.2
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.6e-22 108.6 258 36.8
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 6.6e-22 108.6 176 46.0
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 8.6e-22 108.2 196 44.9
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 8.6e-22 108.2 266 34.2
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 1.1e-21 107.8 263 34.6
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 1.5e-21 107.5 248 39.9
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.5e-21 107.5 273 35.5
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 1.9e-21 107.1 173 44.5
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 2.5e-21 106.7 282 34.4
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 2.5e-21 106.7 213 38.5
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 2.5e-21 106.7 214 39.3
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 2.5e-21 106.7 265 35.8
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.5e-21 106.7 216 39.8
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.3e-21 106.3 256 37.9
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 4.3e-21 105.9 238 35.7
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 4.3e-21 105.9 249 38.6
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 4.3e-21 105.9 205 37.6
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.6e-21 105.5 252 36.5
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 5.6e-21 105.5 187 41.7
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 9.6e-21 104.8 151 47.7
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 1.2e-20 104.4 251 40.6
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 1.2e-20 104.4 200 39.5
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 1.6e-20 104.0 257 38.9
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 1.6e-20 104.0 193 43.0
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.6e-20 104.0 259 37.1
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 1.6e-20 104.0 258 34.1
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 2.1e-20 103.6 253 37.5
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 2.1e-20 103.6 165 44.2
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 2.8e-20 103.2 247 36.8
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 2.8e-20 103.2 151 45.7
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 3.6e-20 102.8 243 38.7
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 4.7e-20 102.4 251 39.8
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 4.7e-20 102.4 270 34.1
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 6.2e-20 102.1 166 44.6
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 8.1e-20 101.7 255 37.6
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 1.1e-19 101.3 277 33.9
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 1.4e-19 100.9 199 38.7
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 1.4e-19 100.9 149 45.6
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 2.4e-19 100.1 245 36.7
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 2.4e-19 100.1 245 36.7
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 2.4e-19 100.1 235 34.0
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 2.4e-19 100.1 260 36.5
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 2.4e-19 100.1 243 35.8
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 4.0e-19 99.4 199 38.7
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 6.8e-19 98.6 240 35.8
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 6.8e-19 98.6 304 35.2
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 8.9e-19 98.2 258 35.7
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 8.9e-19 98.2 252 34.5
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 8.9e-19 98.2 272 34.9
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.2e-18 97.8 240 35.4
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.2e-18 97.8 240 35.4
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 1.2e-18 97.8 214 39.3
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.5e-18 97.4 240 37.1
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 1.5e-18 97.4 214 37.9
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 2.0e-18 97.1 271 35.8
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 3.4e-18 96.3 150 42.7
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 3.4e-18 96.3 242 34.7
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 4.4e-18 95.9 271 33.9
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 5.8e-18 95.5 211 37.9
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 1.3e-17 94.4 211 38.4
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.2e-17 93.6 233 36.5
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 2.9e-17 93.2 244 36.5
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 4.9e-17 92.4 256 35.9
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 1.4e-16 90.9 234 36.3
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 2.4e-16 90.1 185 38.9
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 2.4e-16 90.1 192 41.1
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 7.1e-16 88.6 214 36.9
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 7.1e-16 88.6 242 38.0
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.7e-15 86.7 140 42.9
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 1.7e-14 84.0 237 32.9
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 5.1e-14 82.4 277 31.4
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 7.3e-13 78.6 207 36.2
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 9.6e-13 78.2 246 31.7
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 3.6e-12 76.3 139 36.0
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 3.4e-10 69.7 127 40.9
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 7.6e-10 68.6 100 46.0
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.7e-09 67.4 72 56.9
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 3.2e-08 63.2 63 57.1
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 4.2e-08 62.8 251 27.9
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 7.9e-07 58.5 229 33.2
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 1.3e-06 57.8 81 44.4
Os04g0472700 Oryza sativa ssp. japonica HOM05D003503 ORTHO05D003885 2.3e-06 57.0 160 33.8
ECA234G0160 Erigeron canadensis HOM05D003503 ORTHO05D003885 3.0e-06 56.6 60 53.3
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 3.9e-06 56.2 213 31.0


User provided reference genes

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