Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02485 Selenicereus undatus HOM05D002416 ORTHO05D002554 1.2e-48 196.1 94 100.0
Hund10069 Selenicereus undatus HOM05D002416 ORTHO05D002554 1.5e-30 136.0 94 69.1
AUR62034783 Chenopodium quinoa HOM05D002416 ORTHO05D002554 1.3e-29 132.9 91 70.3
AUR62029524 Chenopodium quinoa HOM05D002416 ORTHO05D002554 8.4e-29 130.2 91 69.2
AUR62044407 Chenopodium quinoa HOM05D002416 ORTHO05D002554 8.4e-29 130.2 91 69.2
EL10Ac5g11330 Beta vulgaris HOM05D002416 ORTHO05D002554 3.5e-27 124.8 91 67.0
Sc22g0003520 Simmondsia chinensis HOM05D002416 ORTHO05D002554 1.9e-25 119.0 92 62.0
Sopen03g028530 Solanum pennellii HOM05D002416 ORTHO05D002554 6.2e-24 114.0 92 65.2
DCAR_021414 Daucus carota HOM05D002416 ORTHO05D002554 8.2e-24 113.6 93 64.5
Solyc03g097780.3 Solanum lycopersicum HOM05D002416 ORTHO05D002554 8.2e-24 113.6 92 64.1
Peaxi162Scf00171g01121 Petunia axillaris HOM05D002416 ORTHO05D002554 1.8e-23 112.5 93 63.4
MSTRG.22882 Avicennia marina HOM05D002416 ORTHO05D002554 2.4e-23 112.1 93 62.4
PGSC0003DMG402019860 Solanum tuberosum HOM05D002416 ORTHO05D002554 2.4e-23 112.1 92 64.1
CAN.G637.55 Capsicum annuum HOM05D002416 ORTHO05D002554 3.1e-23 111.7 92 64.1
DCAR_016356 Daucus carota HOM05D002416 ORTHO05D002554 6.9e-23 110.5 93 62.4
Oeu019024.1 Olea europaea HOM05D002416 ORTHO05D002554 9.0e-23 110.2 92 60.9
arahy.Tifrunner.gnm1.ann1.FZ4IBG Arachis hypogaea HOM05D002416 ORTHO05D002554 1.2e-22 109.8 94 62.8
arahy.Tifrunner.gnm1.ann1.U25A6K Arachis hypogaea HOM05D002416 ORTHO05D002554 1.2e-22 109.8 94 62.8
Dinv11218 Davidia involucrata HOM05D002416 ORTHO05D002554 2.6e-22 108.6 93 60.2
Gorai.008G209800 Gossypium raimondii HOM05D002416 ORTHO05D002554 3.4e-22 108.2 93 62.4
GSVIVG01008625001 Vitis vinifera HOM05D002416 ORTHO05D002554 3.4e-22 108.2 93 60.2
CSS0010877 Camellia sinensis var. sinensis HOM05D002416 ORTHO05D002554 4.5e-22 107.8 92 58.7
Migut.D01226 Erythranthe guttata HOM05D002416 ORTHO05D002554 4.5e-22 107.8 93 62.4
Nitab4.5_0007858g0010 Nicotiana tabacum HOM05D002416 ORTHO05D002554 4.5e-22 107.8 90 61.1
Nitab4.5_0005207g0020 Nicotiana tabacum HOM05D002416 ORTHO05D002554 5.8e-22 107.5 90 61.1
Psat7g038520 Pisum sativum HOM05D002416 ORTHO05D002554 5.8e-22 107.5 93 61.3
Actinidia18319 Actinidia chinensis HOM05D002416 ORTHO05D002554 7.6e-22 107.1 93 60.2
AL5G28330 Arabidopsis lyrata HOM05D002416 ORTHO05D002554 7.6e-22 107.1 92 59.8
Gohir.A12G193000 Gossypium hirsutum HOM05D002416 ORTHO05D002554 7.6e-22 107.1 93 61.3
Lalb_Chr13g0297061 Lupinus albus HOM05D002416 ORTHO05D002554 1.0e-21 106.7 93 61.3
Actinidia08899 Actinidia chinensis HOM05D002416 ORTHO05D002554 1.7e-21 105.9 93 55.9
Gohir.D12G195100 Gossypium hirsutum HOM05D002416 ORTHO05D002554 1.7e-21 105.9 93 61.3
Potri.015G104100 Populus trichocarpa HOM05D002416 ORTHO05D002554 2.9e-21 105.1 93 60.2
Haze_07304 Corylus avellana HOM05D002416 ORTHO05D002554 3.8e-21 104.8 95 58.9
Aa31LG4G17350 Aethionema arabicum HOM05D002416 ORTHO05D002554 4.9e-21 104.4 93 58.1
Cc04_g09440 Coffea canephora HOM05D002416 ORTHO05D002554 4.9e-21 104.4 92 56.5
Cfa018921 Carpinus fangiana HOM05D002416 ORTHO05D002554 6.5e-21 104.0 95 57.9
Medtr8g099840 Medicago truncatula HOM05D002416 ORTHO05D002554 6.5e-21 104.0 93 59.1
Phvul.002G327200 Phaseolus vulgaris HOM05D002416 ORTHO05D002554 6.5e-21 104.0 93 60.2
A06p27960 Brassica napus HOM05D002416 ORTHO05D002554 1.4e-20 102.8 92 58.7
SGA_v2.0_scaffold74G24699 Striga asiatica HOM05D002416 ORTHO05D002554 1.4e-20 102.8 92 57.6
AT3G48820 Arabidopsis thaliana HOM05D002416 ORTHO05D002554 1.9e-20 102.4 92 56.5
Aqoxy2G01216 Aquilegia oxysepala HOM05D002416 ORTHO05D002554 2.5e-20 102.1 92 57.6
Aqoxy3G01547 Aquilegia oxysepala HOM05D002416 ORTHO05D002554 2.5e-20 102.1 92 57.6
BraA06t25736Z Brassica rapa HOM05D002416 ORTHO05D002554 3.2e-20 101.7 92 57.6
TPR.G13760 Trifolium pratense HOM05D002416 ORTHO05D002554 3.2e-20 101.7 93 59.1
TWI23G0491 Tripterygium wilfordii HOM05D002416 ORTHO05D002554 3.2e-20 101.7 91 60.4
VMungo0251G1339 Vigna mungo HOM05D002416 ORTHO05D002554 3.2e-20 101.7 93 59.1
BcaB02g09567 Brassica carinata HOM05D002416 ORTHO05D002554 4.2e-20 101.3 92 56.5
Lalb_Chr07g0183721 Lupinus albus HOM05D002416 ORTHO05D002554 4.2e-20 101.3 93 58.1
TPR.G12748 Trifolium pratense HOM05D002416 ORTHO05D002554 4.2e-20 101.3 93 60.2
Thhalv10010382m.g Eutrema salsugineum HOM05D002416 ORTHO05D002554 5.5e-20 100.9 92 56.5
QL10p001052 Quercus lobata HOM05D002416 ORTHO05D002554 5.5e-20 100.9 93 60.2
Sabra15G0123900 Salix brachista HOM05D002416 ORTHO05D002554 5.5e-20 100.9 92 57.6
THA.LOC104821533 Tarenaya hassleriana HOM05D002416 ORTHO05D002554 5.5e-20 100.9 92 56.5
BcaC01g02378 Brassica carinata HOM05D002416 ORTHO05D002554 7.1e-20 100.5 92 57.6
BolC3t18851H Brassica oleracea HOM05D002416 ORTHO05D002554 7.1e-20 100.5 92 57.6
Glyma.08G051300 Glycine max HOM05D002416 ORTHO05D002554 7.1e-20 100.5 93 59.1
BcaB05g22984 Brassica carinata HOM05D002416 ORTHO05D002554 9.3e-20 100.1 92 56.5
Glyma.05G243500 Glycine max HOM05D002416 ORTHO05D002554 9.3e-20 100.1 93 59.1
Sed0004938 Sechium edule HOM05D002416 ORTHO05D002554 1.2e-19 99.8 96 58.3
MELO3C021701.2 Cucumis melo HOM05D002416 ORTHO05D002554 1.6e-19 99.4 94 56.4
Hma1.2p1_0502F.1_g167893 Hydrangea macrophylla HOM05D002416 ORTHO05D002554 1.6e-19 99.4 93 60.2
Lj4g0008421 Lotus japonicus HOM05D002416 ORTHO05D002554 1.6e-19 99.4 95 56.8
Rhsim12G0179900 Rhododendron simsii HOM05D002416 ORTHO05D002554 1.6e-19 99.4 93 55.9
Eucgr.F04117 Eucalyptus grandis HOM05D002416 ORTHO05D002554 2.1e-19 99.0 92 57.6
CARHR157640 Cardamine hirsuta HOM05D002416 ORTHO05D002554 2.7e-19 98.6 92 55.4
Duzib084G1062 Durio zibethinus HOM05D002416 ORTHO05D002554 2.7e-19 98.6 91 59.3
Manes.14G046400 Manihot esculenta HOM05D002416 ORTHO05D002554 2.7e-19 98.6 92 53.3
C03p65930 Brassica napus HOM05D002416 ORTHO05D002554 3.5e-19 98.2 89 58.4
Carub.0005s1499 Capsella rubella HOM05D002416 ORTHO05D002554 3.5e-19 98.2 92 54.3
Prupe.5G144500 Prunus persica HOM05D002416 ORTHO05D002554 3.5e-19 98.2 89 56.2
PSO017G2890 Papaver somniferum HOM05D002416 ORTHO05D002554 4.6e-19 97.8 92 57.6
Lsat_1_v5_gn_5_10741 Lactuca sativa HOM05D002416 ORTHO05D002554 6.0e-19 97.4 90 57.8
Thecc.03G137900 Theobroma cacao HOM05D002416 ORTHO05D002554 6.0e-19 97.4 93 57.0
COL.COLO4_16695 Corchorus olitorius HOM05D002416 ORTHO05D002554 7.9e-19 97.1 114 51.8
HanXRQChr05g0152941 Helianthus annuus HOM05D002416 ORTHO05D002554 7.9e-19 97.1 90 58.9
Sabra12G0077200 Salix brachista HOM05D002416 ORTHO05D002554 1.0e-18 96.7 94 56.4
vmacro16746 Vaccinium macrocarpon HOM05D002416 ORTHO05D002554 1.3e-18 96.3 95 53.7
Sp5g13210 Schrenkiella parvula HOM05D002416 ORTHO05D002554 1.8e-18 95.9 89 56.2
Atru.chr6.1894 Acer truncatum HOM05D002416 ORTHO05D002554 3.0e-18 95.1 92 55.4
CDE09G0993 Ceratophyllum demersum HOM05D002416 ORTHO05D002554 3.0e-18 95.1 93 57.0
PSO170G5695 Papaver somniferum HOM05D002416 ORTHO05D002554 3.0e-18 95.1 94 57.4
Cpa.g.sc4.113 Carica papaya HOM05D002416 ORTHO05D002554 3.9e-18 94.7 92 55.4
ClCG01G009990 Citrullus lanatus HOM05D002416 ORTHO05D002554 3.9e-18 94.7 94 54.3
Duzib205G1373 Durio zibethinus HOM05D002416 ORTHO05D002554 3.9e-18 94.7 93 57.0
ECA246G3437 Erigeron canadensis HOM05D002416 ORTHO05D002554 3.9e-18 94.7 90 55.6
FAN08G2766 Fragaria x ananassa HOM05D002416 ORTHO05D002554 3.9e-18 94.7 89 52.8
TAR629G3032 Trochodendron aralioides HOM05D002416 ORTHO05D002554 3.9e-18 94.7 93 51.6
PGR119G0018 Punica granatum HOM05D002416 ORTHO05D002554 5.1e-18 94.4 92 55.4
Sed0014171 Sechium edule HOM05D002416 ORTHO05D002554 5.1e-18 94.4 93 53.8
FAN13G3128 Fragaria x ananassa HOM05D002416 ORTHO05D002554 6.7e-18 94.0 89 52.8
MD06G1133300 Malus domestica HOM05D002416 ORTHO05D002554 1.1e-17 93.2 90 54.4
Ciclev10031575m.g Citrus clementina HOM05D002416 ORTHO05D002554 1.5e-17 92.8 90 53.3
CsaV3_1G018440 Cucumis sativus L. HOM05D002416 ORTHO05D002554 1.5e-17 92.8 94 54.3
FvH4_5g09130 Fragaria vesca HOM05D002416 ORTHO05D002554 1.5e-17 92.8 89 52.8
FAN04G1768 Fragaria x ananassa HOM05D002416 ORTHO05D002554 1.5e-17 92.8 89 52.8
FAN18G1315 Fragaria x ananassa HOM05D002416 ORTHO05D002554 1.5e-17 92.8 89 52.8
MD14G1149700 Malus domestica HOM05D002416 ORTHO05D002554 1.9e-17 92.4 89 53.9
Ca_17578_v3 Cicer arietinum L. HOM05D002416 ORTHO05D002554 2.5e-17 92.0 93 54.8
MBI11_g08160_MAGBIO Magnolia biondii HOM05D002416 ORTHO05D002554 3.3e-17 91.7 92 52.2
HPP92_022382 Vanilla planifolia HOM05D002416 ORTHO05D002554 4.3e-17 91.3 93 50.5
RcHm_v2.0_Chr7g0189061 Rosa chinensis HOM05D002416 ORTHO05D002554 5.7e-17 90.9 89 52.8
PSO017G0289 Papaver somniferum HOM05D002416 ORTHO05D002554 7.4e-17 90.5 91 58.2
PSO063G4485 Papaver somniferum HOM05D002416 ORTHO05D002554 2.8e-16 88.6 94 54.3
Nn4g22183 Nelumbo nucifera HOM05D002416 ORTHO05D002554 3.7e-16 88.2 92 51.1
CANSAT80G1361 Cannabis sativa HOM05D002416 ORTHO05D002554 4.8e-16 87.8 91 53.8
CiPaw.11G001900 Carya illinoinensis HOM05D002416 ORTHO05D002554 1.4e-15 86.3 92 52.2
BolC1t03078H Brassica oleracea HOM05D002416 ORTHO05D002554 1.8e-15 85.9 92 52.2
BcaC09g49907 Brassica carinata HOM05D002416 ORTHO05D002554 1.5e-14 82.8 92 51.1
C01p31420 Brassica napus HOM05D002416 ORTHO05D002554 1.5e-14 82.8 92 51.1
Os02g0118400 Oryza sativa ssp. japonica HOM05D002416 ORTHO05D002554 1.3e-13 79.7 91 45.1
Zm00001eb023200 Zea mays HOM05D002416 ORTHO05D002554 2.2e-13 79.0 91 45.1
ATR0691G177 Amborella trichopoda HOM05D002416 ORTHO05D002554 3.8e-13 78.2 92 46.7
Zm00001eb144870 Zea mays HOM05D002416 ORTHO05D002554 3.8e-13 78.2 91 45.1
Lj5C90T2 Lonicera japonica HOM05D002416 ORTHO05D002554 1.6e-11 72.8 53 66.0
Os02g0119000 Oryza sativa ssp. japonica HOM05D002416 ORTHO05D002554 7.9e-11 70.5 91 39.6
SEGI_22844 Sequoiadendron giganteum HOM05D002416 ORTHO05D002554 3.9e-10 68.2 92 38.0
TAR622G1255 Trochodendron aralioides HOM05D002416 ORTHO05D002554 2.5e-09 65.5 76 48.7
Aqoxy3G01826 Aquilegia oxysepala HOM05D002416 ORTHO05D002554 2.4e-07 58.9 58 48.3
Actinidia36834 Actinidia chinensis HOM05D002416 ORTHO05D002554 5.9e-06 54.3 48 54.2


User provided reference genes

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